HsaEX6046079 @ hg19

Exon Skipping

Gene

ENSG00000197935 | ZNF311

Description

zinc finger protein 311 [Source:HGNC Symbol;Acc:13847]

Coordinates

chr6:28962562-28967390:-

Coord C1 exon

chr6:28967264-28967390

Coord A exon

chr6:28966511-28966615

Coord C2 exon

chr6:28962562-28964363

Length

105 bp

Sequences

Splice sites

3' ss Seq

TATTTCTTCTCTGCAACCAGGAT

3' ss Score

8.03

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GAGTCAGTGACATTTGAGGATGTAGCTGTGAACTTCACTAACAGGGAGTGGCAGTGTCTGACCTACGCTCAAAGGCATCTCTATAAGGATGTGATGTTGGAAAATTATGGGAACATGGTATCACTTG

Seq A exon

GATTTCCATTTCCTAAACCTCCTTTAATCTCTCATCTGGAGCGAGAAGTAGACCCCTGTGTGCAGGATCCACAGGACAGGGAGTCCCTAAGCTGCTCCTACCCAG

Seq C2 exon

TGTCAGCTGACAAGATGTGGCCTGAGAATGAAAAGGCAAGTTCACAACAAGAGATTTTTGAAAATGGAGAAGCCTACTGGATGAAATTTAACAGTCTCCTAAAAGTTGATTCCCGGGATCCTAAGGTTAGAGAAGTTTGTGTTCAGGATGTCAAATTAGAGAATCAATGGGAAACATCTATAAGGGAGAAACTGAGAGAAGAGAAAGAAGGCTCTGAGGAAGTGACCTGCAAAAAAGGAAAGAACCAGAAAGTGCTTAGTAAAAACTTGAATCCAAACTCAAAACATAGTCAATGTAATAAAGTTCTTATAGCACAGAAACTCCATGAATGTGCCAGGTGTGGCAAAAACTTCAGTTGGCACTCAGATCTAATTCTCCATGAGCAAATTCATTCTGGTGAGAAACCCCATGTGTGTAATGAGTGTGGGAAAGCATTCAAGACCAGAAATCAGCTTTCTATGCACCGGATAATCCACACAGGGGAGAAACCTTTTAATTGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197935-'5-6,'5-5,6-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.222 C2=0.129

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF127732=DZR=WD(100=8.5),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.7)

Main Inclusion Isoform:

ENSP00000366384