HsaEX6061958 @ hg38

Exon Skipping

Gene

ENSG00000175787 | ZNF169

Description

zinc finger protein 169 [Source:HGNC Symbol;Acc:HGNC:12957]

Coordinates

chr9:94292341-94301454:+

Coord C1 exon

chr9:94292341-94292467

Coord A exon

chr9:94292974-94293069

Coord C2 exon

chr9:94299815-94301454

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTTTTTTCCTGTGAGTAGGAA

3' ss Score

7.11

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GCATTGATGGCCTTCCGGGATGTGGCTGTGGCCTTCACCCAGAAGGAGTGGAAGCTATTGAGTTCTGCTCAGAGGACCCTGTACAGGGAGGTGATGCTGGAGAACTACAGCCATCTGGTCTCCCTGG

Seq A exon

GAATTGCATTTTCCAAACCAAAACTCATCGAACAGCTGGAGCAAGGCGACGAACCTTGGAGAGAGGAGAACGAACATCTTCTGGACCTTTGTCCAG

Seq C2 exon

AGCCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGGCCATCCCACACAGATCTTCCCAAGCTCATCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAGATGCTCTAGTGAAAAAGGAGAAAGTGGAGAGACAGAAGGCCCCGACAGCTCATTAAGAAAGAGGCCAAGCAGAATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGGGGGGTCAGACACAATGTTGAAGGGAGCAGACACTTCAGAATCTGGAGCAGTCATACGTGGAAACTATAGACTGGGACTTAGCAAAAAGTCAAGCCTGTTCAGCCACCAGAAGCATCATGTGTGCCCTGAATGCGGGAGAGGCTTTTGCCAGAGATCAGACCTTATCAAGCAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000175787-'5-18,'5-6,7-18=AN

Average complexity

A_C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.102 A=0.405 C2=0.223

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.0)

Main Inclusion Isoform:

ENSP00000378792