HsaEX6094741 @ hg38

Exon Skipping

Gene

NA

Description

NA

Coordinates

chr19:37631009-37644736:-

Coord C1 exon

chr19:37644610-37644736

Coord A exon

chr19:37643265-37643363

Coord C2 exon

chr19:37631009-37636305

Length

99 bp

Sequences

Splice sites

3' ss Seq

TTCTATTATTTATTTTTAAGCAG

3' ss Score

5.47

5' ss Seq

TAGGTAAGT

5' ss Score

9.66

Exon sequences

Seq C1 exon

GATTTGGTGATGTTCAGAGATGTGGCTGTAGACTTTTCTCAGGAAGAATGGGAATGCCTGAACTCATATCAGAGGAATTTGTACAGAGATGTGATATTAGAGAACTATAGCAACTTGGTGTCACTGG

Seq A exon

CAGGATGTTCTATTTCTAAGCCAGATGTGATCACCCTATTGGAACAAGGGAAAGAGCCCTGGATGGTTGTGAGGGATGAGAAAAGAAGATGGACTCTAG

Seq C2 exon

ATTTGGAATCCAGATATGACACTAAAAAGTTATTTCAAGGAAAGGATATTTATGAAATGAACTTATCTCAGTGGAAGGTAATGGAAAGAATTAAAAGCTGTGGACTTGAAGAACAAGAAAGTCCTCATGAGGTGTGTTTCAGGCAAGTGACAAAAACCACCTCTGAAAAAATGCCTACTTACAGAAAACTCACATCTCTTCCTCTGTATCAGAAAAGTCATAACAGAGAGAAACCCTACGAATGTGGGGAATGTGGGAAGGCTTTTAGAGTACGACAACAACTTACTTTCCATCAAAGAATTCATACTGGTGAGAAACCCTATGAATGTAAAGAATGTGGAAAAGCCTTTAGACAGTGTGCCCACCTCAGTCGACATCAGAGAATTCATACTTCTGACAAACTCTATGAATGTAAAAAATGTGGAAAGATCTTCACATGTGGCTCAGACCTTCGAGTACATCAGAGAATTCATATTGGTGAGAAGCCGTATGAATGTAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000120784-'21-29,'21-25,24-29

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

NA

No structure available

Features

Disorder rate (Iupred):

C1=NA A=NA C2=NA

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9)

Main Inclusion Isoform:

ENSP00000343581