HsaEX7005620 @ hg38
Exon Skipping
Gene
ENSG00000106976 | DNM1
Description
dynamin 1 [Source:HGNC Symbol;Acc:HGNC:2972]
Coordinates
chr9:128239445-128239996:+
Coord C1 exon
chr9:128239445-128239515
Coord A exon
chr9:128239728-128239779
Coord C2 exon
chr9:128239985-128239996
Length
52 bp
Sequences
Splice sites
3' ss Seq
CCTCCCCTCCCTCCCATTAGTGC
3' ss Score
9.37
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
Exon sequences
Seq C1 exon
GTCATGCTTCTCATCGATATCGAGCTGGCTTACATGAACACCAACCATGAGGACTTCATAGGCTTTGCCAA
Seq A exon
TGCTCAGCAGAGGAGCAACCAGATGAACAAGAAGAAGACTTCAGGGAACCAG
Seq C2 exon
GATGAGATTCTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000106976-'39-48,'39-47,40-48=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.010 A=0.426 C2=0.023
Domain overlap (PFAM):
C1:
PF0103115=Dynamin_M=FE(32.9=100)
A:
PF0103115=Dynamin_M=PD(18.6=72.2)
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains