HsaINT0018486 @ hg19
Intron Retention
Gene
ENSG00000169925 | BRD3
Description
bromodomain containing 3 [Source:HGNC Symbol;Acc:1104]
Coordinates
chr9:136918387-136933141:-
Coord C1 exon
chr9:136933067-136933141
Coord A exon
chr9:136918713-136933066
Coord C2 exon
chr9:136918387-136918712
Length
14354 bp
Sequences
Splice sites
5' ss Seq
CAAGTACGC
5' ss Score
6.23
3' ss Seq
TTGTGCTTCCTCCTCTGCAGCTG
3' ss Score
10.43
Exon sequences
Seq C1 exon
TGCCGGGGCCGGCGAGCCAAAGAGGAGCCGGCCGCGCGGGCCGGGAGGGGACGGCCGCCGGAGCCGCGAGGCCAA
Seq A exon
GTACGCCTTTCTCTTGCTTCCTTGCGCGCGCGGGGCGGCGGGCGGCGCGGGCGGCGGCGGGCCGGGCTGGGCCGGGGAGCGCGGCCCCGAGCGCCCCGCGCAGTCCGCCGGCGCGTCCGGGTGAACCGGGCGCCCGGGGCCGCCGCCGCCGCCGCCGCCTTTGTGCGCGGCCACGATGCAACAAAGCGCGGCGGCCGCCCGGGGTCGCGGCGGCGGTGGCGGCGGCGGTGGCGCGGGCTCCGCTCCCCTCCTCCCGCTCCCGCTTGGCCGCCTCCGTCCCGGACTCGGGGCGTCGCTGCGGCCGGGGCGCGCAGCCCGGAGTTGGCGCGGCCCGCGCGCCCCGCGCCAGCCCGGCCTCCGCGCGCCCTCCCTCACGGAAGGGATTTTTTTCCCCCTTTCCTCCGCCCGCCATCTTTCGAAGGGGGAACCCAGGGAGGACGCGGAGGGGGAAGGTGCGCGCGGCGGCCCCGGCCTGCGGCCGTGCGCTCCGCGGGGCCACTTTCCCCGCGCCTGTTCCGCCGGCCTCGCTCCCGAGCCGTTGCTGGGGCCCGCGCCTGGGGACCGTCGCCGCGCGCCGCGGCCGGGGCGGGGGGCAAGGCCGGGCTCGGCCCTGGGCTCTGCGCGGCCTCCTCCCAGAGTTACGGGCCCAGAGCTGACTTTGAGCCCCCCTGAGTTGCCGGATTATTGCACCCAAACCAGGGGGAGACCCAGTTCCCGTTTTGAAATCAGCCTGAAAATCGCTTAATCCGGGCGAGGGCGAGTTGGAGCGGGAGGGACGGGGGTGCTTCCCCTCCTTCCCACTTTTGGGGGGCGCCGGAGTGACAACGTGATACAAGCCCATCCGGGGAGAAATGCGCACCCCGAACCGTGTACACCCACATGGCCCTGGTGGGCTCTCTGTGAATAAAGCTGGGGCGTGCGGGAAGTCTTATTCCACCGGTTGCTCGTTCGGGGGCAGGGCCGGGATGGGGGCTTCGCGCGGCCTCCTTTCCCTGGAGGGCGAGAACTCGGCCCGCCGAGACCCACCGGGGGCAGGGACCCGGCGTCCATCGTGTGGGTTCCTCCGTTCGACCCAATCCTTGAGTGGTTGCGATCTTTAATTTTGGTTGAAAGCTTTCTGCTCAGAAATAGATACTGGGATTTCTCCCCCTTACATTAAACTTGGTCATTGTCTGCAAAAGTTAACCAGGAGGGGAGACTGTAGTGCATTGGTGGGCAGAGTAATTGGGCTGGAACTGCAAGAGGCAGCTTCGTGTGTCCCGTCCTCCCCCGCCCTACCCTGTGAGAAGGAACAGAAGAGGAAAAGAGTTTTCTTTTTACCCTGCTCTTTTGTAGGCTTTTCCCCTTACTCTTTTCTTTAAAATGGAGGGTTTTTTTTTTTTCCTGGGTCCATGTAGTATGCCTGGGGAGATCCTGGAATCTATGCAAAGTTGTATGGCATTTTTCTGGGGAAAGTAGTTTGTTACTGGCTTCCAACGGGGTCTAAGGAAGGTCTGAACCCCTGCAAGGGGCTGGCCTCGGGGGTTAGGGAGCCCTCCCTCCGGGTTCTTCCCTGGCAGCCCTGATGCAGCCTCTCATTTGCAAATAAAGGTCTGTGTTTGCCGTTTTCTCTGTTGAGGCCTTGATGGGTGCTGGTGGTTACTGATCATGAAAGATAAGGCACACGCTGTAACAGGACGGGCTGCAGGCGAGCGAGGGGCATTTCTTTCTGACCTTCCGGGTAGCCTCAGAGGCCCGGTGCCTCAGCAGGGCACCGGGTGCCTGGAAAGACTGTGGGAGCAGCTCCAGCCTGAGCCCTGCCGTTGGGACATCCGGGGAGGAGGGATTTCAAAAGCTTTCTCCGAGTGGGCAGTCACTCCATTTTTATTTTTGTTTTGTTTTTAGAAAGTAGAGTAATTACTTTCCTTTGACAACAGCTCGCGCCTGCTTCGGAAGTGAGTGAGCTTTGAATGAAGGACGGGACTTGCAAACAGTGCCTGCCCTACACTCCGAAGTAGTCATACCCAGAAAGTGAAAGTGGGGGTGTGCAGAGCGAAGCAGCCAGGCCTGCTGCAGCCGGTGCTACCTTCCTCTACCCTCTTCCTCCAGGCTCTGGAGATGCCAGCCGCGGGAGCCCTGTGCACCAGGCGGCAGTGATGGCCTTGTGCGATTCCTGGTGCCACCAGGAAGTGCCACCACTTTCCCTGAGGCATGGTGGCTCAGGGTTTCCCAAGTGGGGTGATTGGCACAAAACCAACAGCTATGCCCAGTTGTCGATGGGAAGAGCCATGTTTTGCTGTGGATACACACGGTACCGGGGCGGGGTATGGGGAACCGGGGCCTACTCTTCCCAGCGTTGCTGCCTGGGAGGTGGGGGCATGCCTGAAGTCGTGCTGCGGGTCTCTTGGTTTTCAAAGCAGTTAACGCAGTTGGTCAGAGGATCCTCCTCTTGCTTCCTTGACCGGTCATCAAAGTATAACTGACCTGACGGGGTTCCTGTCCTAGGCAGGTTCCTTTTTTTTTTTTTTTCTCTTCTCCTCTTGAGATGGAGTCTCGCATTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCCCACTGTAACCTCTACCTCCCGGGTTCTAGCAATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCGTCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACTGTGTTGGACAGGCTGGTCTCGAACTCCTCACCTCGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTAGCCAGCAGGTCCCTTATATCACGAAGCCAGTATCTGGTTGAAGCTAGAAGGTAACTGGATGAATCATGGTAGAATGCAAGGCTTCTTGCCGTAAAAGGTTTTGGAACTTGCGGGTCTGCCTTGGGCCTTCCCGACCCCTGTGGCTCCGCCCCCTTGTTGGAGCAGAAGAGATGCACAGGTAGCAAAGCATGATGGGGTGCCAGGTGCATTTGGGTCAGCGTTTGCCAAGAATGGCCTTGCTCCTGTGTTTTTGTTGGTACTGCCACCTTGTAGAGGTGCCCAGCTGGTGGCGGAGCATAGGGTTTTCTTTGCCTATTCTCCTTCCTGTGAAATCATGGGCACAGACATCATGGGCCCCTGTGCCCGGGCCTCCCTGCTCTGGTTCCTGGGCTCCTGCCATCTGAGAGGCTTGAGGGCTTGCTTATTTGTTTGTTTGTTTGTATTTTTAGTAGAGATGGCGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCTTGGCCGTGAGTGACCCACCCGTCTCTGCCTCCTGAAGTGCTGGGATTACAAGCGTGAGCCACCATGCTCGGCCAAGATGCTTGAGAGCTCATTTATTTATTTACTTATTTTGAGACAGAGTATCACTCTGTTGCCCAGGCTGGTGTGTAATGGCATGATTTCCCTTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCCTGGCTCAGCCTGCCAAGTAGCTGGGATTACAGGTGCCCGCCACCACGCCTGGCTATTTTTTTTAATTTTTTTTAATTTTTTAGTAAAGATGGGGTTTCGCCATGTTGGCCGGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCATCTCAGCCTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACCATGCCTGACCGAGAGCTCTTTTAAAGAGAAAGTGTCACTTTGGGCCATTCACCTGTTGGTGGTTTAAATTGTAAGTCTTCTGGCCACTCCTGATTGAGCTCGCAGTGGAGCCAGGACCTGTGCGTGTGGCTGGAGGCTCGGACCCTGTTGTGTCCGTGCTGTTGGCTGTCTGCGTCTCGCACCAGTCTGTGGCTGTTCCCTGAGAGTCAGTTCGCAGGCTGCCTCCTCACAGGGCCTTCGGAGCCTGGTGTTGGGAAGATGGGGCGTGGAACATGCCCCCGCCCCCCTCCTTGCCGCAGGCCCCCAAGGTACTGAGTTCGTCAGAAGTTAATCCGGTATTGTGGGAGACAACTTTTCCAGCCACTTGGAAAAGTGTCCCGCTGAGGGTGCAGTGATGTTCAGGAGTCGCCGGCTGGATCTTTCTGAGTGTGGCTTGATAACCAGCTGCAGCATTTTGCAAAGCACCCAGTGGACTCGGGTGTGATCTGCAGAGGCGGCTGCTGGCCAGGCCTGGAGTCTGGGGCAGAGGGAGTGCCCTCAGTGCACCTGTGAGGACCTGGGACTAAGAGTCGGTACCTGGGAGCTGTGGGACTCTGGGGCGGGACGGCCTTAGCCTCCGTGTGAGCACTGACCGAGATGAGGCACAGATGCATCTGTGTGAGGTGCCCGGCCCCTGCAGGAGTGCTGAGTATTGTAGCTATAACCTGTCATGTGGCAGAAGGAAGAATCTACTATAAGCGGCTGAGAGGATGCCCTCCCTGTGCCATGCGTCACTGGAGCCTTGGCCTGACAATCCCACAAGGAGCAAAATGTGCAAAGGGGCAGCTGTGTGAGCCTGCGGGTCCAGGGTGCCACCCGCCCCCATCTGCCCACACCACAGGACAGAGCCCTGGGTATGCTGACCAGGCCCTCGCTGGTACCAGGGGCTGGGTAGGAGGCAAGGGTCAAGCACGGTGGCTCCGTGGGCTGTGGACTCACAGACAGATGTGCTGCATGCCCACGCTTTGCTCTTAGCTCTGCCTCCGGTCTGTCCCGGCAACAGGCCTGGGGGCGTCCTGCAGTCCTCGGCATTTGTGGTTGGGGGTGAGCAGAGAACATAGACGAAATAACCAAGGGGATGGTCTGAGAGCTGCGGCCCTGCTGGCCCCTTGTCCTGGCTCGGCATGGCTGAGTGGGACAGCAGTGAGGCCAGGCCTGTCTCCTGGGGCCGGGGTGTTTTGTGAGTTTGGTTCTTGTCAGGCCGGCTGAGAGGAGATGGAGCAGACAGATGGATGCTAGGTGGGCCTGCCGCAGCTTTGTTTTAGGAAGTGCGGAGCACCAGGGCCTGACCCTGAGGCTGTGTCCCTCTAAGAGCACGGTGTCTCCTTCCCTCTAAAGGGCCAGGTGCTGTCCTCACTCACTGCCCCTCTGAAGAGAGTCCCCTGCCTGAGTCGTGGCTCTCCTGCCCTTCCCAGACCCGTGGGAGACCCTGACTACGTGGCGGTGGCCTGGGGTTGGGAGGGCCTGACCAGTGTCTGTGGGGCCAACTTCCTCGTTCCCAGCATGTGTGGAGGGTCGGGCCTCCTCACGCGCCTCATGAGGGTCCCACGGGGGTAGAGCGTCCTTTGAGTCCTCTCTATTCGAGGAGTGGGTAGAGAGGCGGGTAGGGACGGAGCTTGGAAGAGGTGACGGGTTGTGGCCAGAAGGCTGTGGGGGCGTCATGGCAGGAAGGGAAACCTTCAGAGAGGCCGCTCACCCAGGGCCGTGGGGCCATGGAGAAGCACAGGCCCTGGGTTCAGAAAGCAGGAGGCATATGAGGTCTTAGGTCTAGAAGGCACTGGTGGGTGCAGAGTGGGGAGAACTGTGGGGTGCAGGGGACAGTCACGGGAGAGGCAGCGCTGGCAGCTGCACCTGCCCAGCGTGTCTGGGGCCATGCCCCAGGATAGCCCCACCAGTCTGCTGAAGCGCCCCGGGACAGGGCTGGGCCTGTAGAGCCGGGCCCTCCAGGCGGCCAGGCAGCTGCAGGAGAGCAGGTGCGCTGTGCATGGGGGGCTCACAGCACTGGGCAGATTCCCCTGGGGAGTAGGCGCCAGGGCTGGCCGTGCCTGCTTGGGTGGGGCCCACGATGCCCAGCTGCCCTCCCCAGGGCTCCTCCAGGGCTACAGGGGGCCCCCAACCCCCGACTTCTCCCCTGGCTCCATAGAAGGAAGCAGTTGGCTCCGTCTGTCACTGAAGGCAGCCCTGCCCTGACAGATCCAGTTTCCCGAGTCCTGGAGGGTGGCCGCTGGTCACCACGTGGGCTGGGGAGGCCCCTCTGGCCGCCTGGGGACAGGTGCTAGGTTGGCCGGGTTAGATGGGGCTGTGGGGGCAGCAGGCTGGGATCCCTTCTCACAGACTCAGCTCCCTCCTGCCACAGCCGATCACAGCACTGCTCCCAGCATTATCCCGAGAATTCTGGGGCTGTGGGGTGTTGGCGGTGAGTCTGGCATGGATGTCCAGCTTTGTTCAAGCTGGCTCTGGCCTTCTCTGCCTGGGCGACGTTGTGCCCCTTCACCTCTGAGCGTCCCCTCCACTTATGGAAGATGGGGCTCATCTGACCCCCACTGACGCAGGACAGAGTCCAGGAGACGGGCTGGAGTGCCCCAGTGGGGGCCATCCAGTCAGGGACACAGGTACAGAGGCCCAGAGCTATGGAAATTCCAGGGCTGGAGACCCATGGGGAATGGGGAGCCCCTGGGAAAGGCCTCCCCTAGCTTCCTCCAGCACCCCCACCCTTGGTTCCAGTGCTCCTGTCTCCCACCCTTTAGCTGGCAGGTCTGGTTGAGCCCCTGCAGAGCTATGTAGCCCTGCCCCTCCCTGCCACTGCTCCTCCAGACTCATGCTATAGCTGGAATGGCCTTGGTAAGCTGTCCTCCCAACCCTGCCTGTTTGCTGAAAGCTGGGACTCCCCATCCCTGGACCCCAAATAAGGACTTTTTGCTCTGGGCCCAGGCCAGGCTGGAGATGCCCCCATGGTCCAGCCGCTGCCCCTTGGCTGGTTTGCCCCAGGGTGTGGCATTGGAGGCAGCACCCCTCTGTCCTCCCTCTGTGGAGTGCCTGAAGGCTAGGCTGCTGTGCTGCCCAGGCGACATGCCTGCTCCTGCCCCTCTGGGTCTCTGCTCCCCAAGAGGGCCATGGAATGGCAGGAGGGGTCAGGGAGACTGCTACTGGCATTTCTGGGTGTTTTCTTTGGTGGCAACTGGACAGATTCCCATTCCCTCCCTGTTTGTCCACAGCCCTGAAACAGCCCTGGACTCAGCATCTTTTCTGATGAATTCTGGGCTGGGCCAGCCTAAAGGGGGCTGAATTTCTGCTTTTCATTCAGGTCCTCCTGTGCCCTATGGAGAGGAAGGCAGAGTCCAGGGACCTTGGGAAGGGTTCAGGGGGCCACCCACAGCTTCAGGGCCAGAGGTGGGCCTGCCTGGGGCCACACAGCAAGGGTGAGGATAGGTAGGATTCGGGCCACCTCACCAACATTCCTTCCATGTCCAGCACAGAGCCTCTCTTGGATGGGGCATGAGTGGGACCCAGGAAGGGGGCTAGTCAGTGTTAGGGGAGCCTGGCCACTGCCCTCTCCCCGCTGGCTACTTTGGAAATCTCCATGGCATTCCAGATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGGGTCTTGCTCTGACATCCAGGCTGGAGTGCAGCAGTGCGATCACAGCTGACTGTATCCTCAAACTCCCAGGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAATAGCTGGGATTCTAGGTGCACCACCAGGCCTGGCTAATTTTTTTAAATTTTCGTAGAATCAGGGCCTTACTATGTTGCCCAGGCTGGTCTCGAACTCCTGGTTTCAGGGGATTCTCCTGCCCCTCCCAAGGTGCTGGGGTCACAGGCCTGAGTCACTGCGCATGGCCTGGGTCTTTCTTGAGGATTTCACCAGACCCACTCACTGCTGGGTTTTCGCTTGGCGTTCGAGGACTTTTGTGGTTTGTCTGAGTTTCCTCTCTGGGCAGTTTCGGATCCTCTTGTGTCTAAGGCAGGCTGCCTGCTCACTCCGACTTTTACCCGACTGGCAAGGGTGGCCTCTGCCTCTGTCTCTGCTGGGCCCGGCAGGCAGTGCCTGTGGGCTCTCTAGCATGGGCTTTGTGGGCAGCTGAGTGGGAGACCCGGGGAGGTGGACCCCAGGGAGGGTCTCTGAGCCTCCGCCCCCTCCTCTGGGAGACAGAGCTCCATCCCTGTCCTGCAGTGCCCAGGGGAGAGCAGCAGTGGCACATCTGGCTCCCCAGGCCTGTCCCCCAAGGACCCACCGCTTCCCTGCCATGGTCCCAGGGATGGAGTGCGTTTGCTGAGGACAAGGCTGCTGCTGCTGCTGCGACAGGCTGCTGATGGCCAGGCTGCCTTCCTGAGGGGGCCTTGCCCGCACAGCAAAGAGCCCCCTGGAGCGAGGTGGCTGCCAGCAGGCTGTGTGGGAGCCCCTTCACCACTGGAGGGCTGAGTGGTGAAATGAGTTCTTCCTGCACTGTACATGCTCACAGACCCTTCTCGGTTCACATTTTAGCAGACAGGCTTCCAGCCCCTCCAGTGTCCAGGGTCCCTGTGGTGTGGGGCCCCCCTGTTCCCCAAGAAAAGGAGCAAGGGTTTACCCCCAGGAGACCACACCCCCTTCTGCTGCACATTCCCGCAGGGCAGCTGCGAGGGGTGAAGGAGGGATTGCGGCACGAAGGTTTTGTGTGTCTCGTGTCTAGACTTTAAGGCACTGGGGTCTCTGGCACCGCTGCCTTCCTCCAGCCCGAGTCACTCCACCTGAGTCCATCTGCCCCACCCCTGCCCCACTTCCTCACAGGAGTCCCGTCGGCTTATTCCCCATCGCATGAAGGTGGAGAGTGGGTGCAAGGCAGAACCCTGGACCCCACAGTTGCTGTGAGGACGCAGGATGCAGAGTGTGTGTTGAGGAACGGGGTGCTGGGGGCCCGGGGAGAAGGGAGGTGCACCCTCTTCCCTCTGAGCAGCTTCCGCGGGCGGGGGCAGCTCTGGGCTGGCCCGTTTCTTCCAGACCCCACTCATTTTCACCCCCCACATTATCATGAAGCAGATTCCAGACACATTTCATTCATAGAACTTTCAGTCCAAATCTCTGAAAGATGAGGACTTTTGAAAGATTGTAACCACAACGCCACCATACCCCCAATACTAACTCTGGTTCCGGAAATACAGTCAGTGTTGAATCAGTGCCCCTTGGCTCCTCCAGCAGGCGCTGCCAGCACACCGGCCCAAGGCACAGCCTCCAGTGCCCAGCTTTGCTTCAGATCCAGTGCCACTGCCCCACCAGCTGTGGGGCCCAGGCCACCCCTTCCTGGACTATAAAATGGAGCCCTCTTCGGCCAGCCGCCCACCCTCCCTCTTGGTGACACAGTGGGCTGAGCGAGGGGATACTGGGTTTTTTCTTTTGCAGCAAAATCTGGCCCCCCTTTACAGCTGATACAAGGCTGTCTGTAGTTTGAACCTTTGTGTATCTCTGCAGAATACCGGGTTTGATTTGGGATGTCATCTCAGACCCTGGGGTAGGGGTGTGTGTAGGAGAGACACCTCTACCCCCCGGGAAAAGGCTTCCCTTGCTGGTTTGGCTTTCTGAAATCCAAAAAGTTGACAGTCACTACAGGAGTAGAGGCAGGTGACACGGAGTGGTCAGGCTCTGGCCTGGGGGGGACAGGGATGTAACAGGGGCTGGTCCCTGGTGTCCAGACGTGATCCTTCTGTTTACTTTGTTTCTGGGAGCTGGGAGAAGCGAAGGCCATGTTTGTTTTGGGCAGACATGTTCTGAATGTCCAACACTGCCAGCCACACTCCCAATGTTACCTCTGTTCGTCCACGTGGCACCCTGGAGTGATGCAAGGTCCTCCTCCCTTTGCTGCGGCCCCAGGGGACTTGGGATCTAGGGGCACCTCCTTTTCTCCCCAGCCAAGGGGGCCCATGGTCACACCCAGTTCTAGCCACTGGCTAGGACGTCCCGGCCCCCAGAATGTCCTTGCATGAGTGAAGCTGTGGCCTGCGGGAGGCATGACTCTCATGCCTGCGCATGGGCTGTGGTGGGAAGCACTCGGTAGACGACGGCCTTGCTAAGCTCTCAGCACAAACCATCTCTTCACAGCGAGGTCAGCTGGGGGTGGAGAGCCGGGCTGTGAATCCTGGTGTGCCGACACCGCGGGCGCTCCATGCCTCCCTCTCGCAGGGCCTCTGTGTCGGGTGTGCAGACCCCAGGGGGGCCCCTTACCGCCTTTCTGCATGGGCCTCTGTGTCTGGTGTGTGGACCCCGTGGGGGCCCTGCAATCAGCCCTTTCAGAGTCTCCACTGGACCTTGGGTTCTGGAGGGGCCTTGTGGCTGGCGGCTGGCCCTGCCCTGGGCTGCCTTTGTGTCCTTGCTGGCCGTTGAGGGTGGGGGAAGCAGGAGCGCCTCGTTCTTTAACTTCCCAGGGTCTTCTTGCTGTGTGGCCGCCTGCAGGTTGAGGAGCCTGGGACAGGAAGCCCAGGGTCTTGATCCTGGGCTGTGCCTCCACTGCCGACTGCTGAGTGCTTTGTGTCCCAAAGCCTTTGCGCTCAGGTGGCATTCCGGAGGTGAAGGAGGAAGGGGCCTCAGCTTAGTCGTCCGTACACGTGCGCAATTATTCTGACCTTGCAGGTTTGTTGTGGGGATTGTGGGGTCTCGGCATCGGTGAGCTGAAGGGCTCGTGGCCCTGGCCGACCACCTGTGCTGTTTGTGGTGTTTCTCCACTGTCTGCTCCCACCTCACCTCACCTCACCTCACCTGGCAGAGGAGCCACCGACGTCTGGGCCAGAGGGCTGAGGTGGGGTGAACATGGTGTGAAAGCACCACACTCTGCAACAGGGTGGCTGTCCTGCTTGTGCACCCTCTGGGGCACTCGCAGGCTGGGGTAGGGTGACCCCACCACCGTCCTTCTCTTGTTGGAACCTCCACGTTGATTTGGACCGTAGTCCATCACTGATTTTCAGCTGGCCTGGCCAGTGTCTGTTTCATTGTAATTTCTTTGTGGAAGCCTCAGTTGTCTTTCCCATCTCGGGATGTGGCCCCGAGCTCCCTGCACAGACGTGGAAGGTGCATGGGCTCTGGTCGGGAAGCTGTTTGCCTCATCTCATTTCCGTCGCCCTAGGGGAGGTCTTTCGAGTTGGTCTGCAGGTTGCCCTGGTTCTTTCCAGTGTCTGTGTGGGGCTCTCTTGCACAGACGCCTTCTGGTTTCTTCAGCTTCTCTGTCTGGACAGTTGAGACACTGAGGGTGGCAGAGCCAGGCCCTGGCTGTGGCTCTAGCCTGTCCACCCACTGTGCTTGGAGGGAAGGTGTCTGCAGACGGGACCAGCCCTCGGCCCCAGAGGGGATGACATGGTGTGAATGTGCTGTGGACGGGGACCTGAGGCACTGAGCCCGTCTCAGCCCTCCCTCCCCACTGGGACTCTGGGAACTGCACATTCTCCCACAGGGAGGGGTCACCCCGGGCTCTCACCTGACTGTCGCCTCCTGGTCTCCTCCTGCCCGGCGTGGTCCTTGCCAGGTGGTGGGTCCCAGTACCTGGTAGCGGAGGGGGCTTGAGGGGGATGCCACCCCTTTGCCCTCTGGCTGCCCTCCCTCCCTGCCCCTCCCACTGGCTGGTGCCAGGCTGCCTGGGGGCTCCGCTTCTATGCCAAGGGCTTCTGGGGGAGGCAGGGCCACTTATCATGGCATCGTGTTGTCCTCGAGTTTTTGCAAAATCTGAGTGTGTGGGGTGTAGGTGTCTCAGAGGGCAGGGTTTGTGTTCCAGGAGAGGAGAGGTGAGATCACCATGCCTCACCACCGAGGGTGGGGCAGTCGCCTGCCCGTGTGTGCCAGGGGCTTTTTATACTGCACCCCTCAGCCTTCCAGGTCTTGTTGGGGTTGGTGTGTTTCTGCCAGGTAGCGGAGCTGGAGGCAAACTGCACCCTCAGGGCCTGTAGTGACCACTGGCATTCAGTGAGCACATGCTGGCACCAGGTGCAGCCCCAGAGCTTTAACCACATTGGCCGGGATTTCCCTGGCAGCAGCAAGAGGGCTTCTGGGCTGGGCCTTGGACGGCTCTGCCGTGGCTCGTGGGCTGGTGCCAAGCAGAGCCTGGGGCGCCCCTCCTTCTGCCTTGCTCAAGCTCACAGTCCATGGCCGGGCGGGGCTGCCCTCCCCACCCAGGACGAGGCATGCACTCCGGTGTCCATGGCTGGAGCTGGGCTCCTTCTCAGTCTCCGGTTTGAAACAGTGGTCAGGTGGTTGGAAGTGGGTGGCTTAGAGGGCCTGATCTGGCCAGGCGTGGGATCCTGACGGCAGCATAAGCAGGCCCCCATGTTGAGCTGTGACCGTCCATCCTCATGCTTGGAGGAAGCTGGCCTGCAGCCTGGGAGCCTTCCTTTGTGCCCTGACCACCCCCACATCCCCAAAGGTCAGTTTCAGCCCCATTTCCTGGCTCTGGGCCTGTGCAGCAGCAGTGGATACTGGGAATGTCCCCACCTGACCGACACCTGGGAGCTGACATCTGGGCCCTGGGAGGCAGCAGCAGCACAGCCTGGGCCTTCTGTCAGGGTGCTGCCCGGCAGTCTCAGCGGAGCTGCGTGTGGTGCTTGGTGCCCATAACTGGCGTGAGCTCTCTCTGTGCCTGACTCCTCCACCCTCAGGAGCCTCGTGGGGAAGTGGAAGGACCAGGCCGTGTGGCTGGCCCCAGTGTCTGTGCTGCCTGGGGGCCCAGCAGGAAGGGTGTTCTGGGAGCTACCTGGAGGCCTTGGAAGGGCAGGAGCCTGCTGCTGTCCAGGCCTTGAGGGAGGGCCGCAAGTCACAGGAGACAGGACACAGGTCTCAGGACTCGGTCACCCCAGGCCCCACCAACCAGGGTGGGGCAGGACTCGCTTTCACTCTGAGTCACGTGGAGCCCCTGGGAGGTTTTGAGCAGACCGGTGACTTGATCCGACTTGGTTTTAACAGGATCACCCTGCGGTGCGGGCTAGGCGGTCCTTGCGGGGCAGAGCAGGGAGCCCTGCTGGGAGGGCTTCATGGAAATCCTTGCAAGTGGTGGTGGCGAGGGGCAGTGCTGCCACGCTTTGGCCTGGGGCTGCCCTCCGCACCAGGGTTGCAGCCTGGGGCTGTGAGCACCGGGTCGGTGAGGTGGAGAGGCACCCGCTCACCTCAGGAGGGCATAGAAGAGGGTGGGTGTGAGGGGCTTCCCTGGATGAGGCCCTGGCACAGGTGGGCGCCCCAGAGACGGGGCACGTTCTCTCGTGCTGGCATGCTTGGTGGGTGAGCTGTGTTGCGTGTAGTTTGAAGCCCTTTCCTCTCTGGGGTGGGGTGGGAGGAAGTGAGGTTACACGCAGGGTGCTGACGACATTGAGCATCCAGCTTGGGGAGGGGGTCCTGGTTTGCAGCATTTGCCCATGGCTGTGGTGTAACTGCCCACCGAGGCAGATTTCAGGGGACCAACCAGATGTCACCCAGCTCACAAACTTCCCCTAGTCTTGACTGTCTGCCCCGAGCGTCTACAAGTGGCCGGTTCTGGGGCCGGAGCCGGCTCCTCCCATGGCAGAGCTGCTGCCTGTGCTCCGAGGGGAGCCTCCAGCCGTGACCTGTCTAACTGTCAGTTACACGACTGCAGGAAAGGCCCAAGTGGCAGCAAGGTACGAGGCTGAAGTTGAAGTCCCAGGCGCTGGGTTAGAGCTCCTCGGGTCTGCCCCACACCTTTACAGGTAGACACGGGGCCACGCCGCAGGGCCCTGGCCATGGTTGGAGGCCTGCATGCGTTCTCCACTGTGCAGCGTTCCTATGGGCGTTCTCAACTGTCCGTGCCCTCCTGGGACACGCAGGGTGGCGGTGGCCTCCTCCTGCCAGCCCTGCCTGTGGCTAGCCAGTCGGGGCCAGGGAAGCCCCAGCATCTCGTGTGTGCAGAGCTCCCTGTGGTCAGCTGGGGTGTGGAGGTCGGCAGGGTCTGAGCCGCCGCTCCCGCCTCTCTGATTGGCCGAGAGCCAGGCCGGGTCACAACCACGCCGCCATCACAAACCTGGGCCCGTTCTCCTGGTTACGGTAGAACCTCACTGCTTGGCCTCGCTCAAGGGCACCACCTCCCCGCACCGTGTTTGGGTCTGCAAACGTCCGTGTTGTGCCGGCCCCACTTCCCCTGGCTGTGTTGGGCCCGCACCGTGGCTGTCCACGCATGGGTCACTCTTCAGTACATTGTTGTGGCCAAGCTGTCAGAGCCCAGTAGCAACGAGTCGACCCCACGAGTGGGTGGTTGGTGGGCAGAAGGCTGCCAGTGGCTGAGTCCCTTGGCACACCTGCCTCCCAGTGTGTTCCCCAAGCCCCCACCTGGGAGCAAGTGGCATGTGCCTGAGCTCCCTCCACCGCCCAGGCCTTCCCTCCCGTGCCTGAGAGCAGTGGTTGGAGAGTCGTTCTGAGCTGGTCGCGCTTCGCCTGAGCAGCTTTCCCGACAGCCTCTCACCTGGGTGGCTGGGCAATGGGGGTGAGTGAGTGGAGCAGGCCCTGCTGAGGCCCGACAGGTGCCCTCAGGAGCCCGCCGAGGCTGGGAGAGGTGGGGGTCCCCGGGGTGACTGGCCTTCCTCTCTGTTGTGCTTCCTCCTCTGCAG
Seq C2 exon
CTGTCGCCTGGTTGGGCCCGGAAATGGGACGTCGCGCTTTCTCAGGGAGCGTAGAAGCAGCCAGGGCCTCTCCAAGCCGCTGCTGTGACAGAAAGTGAGTGAGCTGCCGGAGGATGTCCACCGCCACGACAGTCGCCCCCGCGGGGATCCCGGCGACCCCGGGCCCTGTGAACCCACCCCCCCCGGAGGTCTCCAACCCCAGCAAGCCCGGCCGCAAGACCAACCAGCTGCAGTACATGCAGAATGTGGTGGTGAAGACGCTCTGGAAACACCAGTTCGCCTGGCCCTTCTACCAGCCCGTGGACGCAATCAAATTGAACCTGCCG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000169925-BRD3:NM_007371:1
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.470
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0043920=Bromodomain=PU(33.3=40.8)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)