MmuINT0025661 @ mm10
Intron Retention
Gene
ENSMUSG00000026918 | Brd3
Description
bromodomain containing 3 [Source:MGI Symbol;Acc:MGI:1914632]
Coordinates
chr2:27463889-27475398:-
Coord C1 exon
chr2:27475142-27475398
Coord A exon
chr2:27464194-27475141
Coord C2 exon
chr2:27463889-27464193
Length
10948 bp
Sequences
Splice sites
5' ss Seq
AAGGTGCGC
5' ss Score
9.05
3' ss Seq
TTCTCTGCTTTCTTCTGCAGGTG
3' ss Score
13.74
Exon sequences
Seq C1 exon
CGGCCGCCTGCCCGGGGTCGCAGCGACTGCGCGGGCTCCGCTGCCCTCCGCCTTGCGCTGTGCGCCCGCGGCTTGCCGGTCGCCTCGGGCCGGACTGGGAGGCGTCGCCTTGGTCGGAGCGCCCAGCCTGGACTTGGCACAGCCCGCGCTCTCTGCGCCAGCCCTCCCTCACGGAAGGGATTTTTTTTTCCTTTCCCCTTTTCCTCTGCCCGCCATCTTCCGAAGGGGACTGCCTGGAGGATGCGCGGCGCGGGAAG
Seq A exon
GTGCGCGCGGTGTGCCCAGGGTCGCTCCGGCGCCACTTAGGGCGGATCGTCGCAGGGCAGGCCAGGCTGGGCCTGGACACCGCTGGAGCCTTGCAAGTGGGGCAGCCGCGGCGTGGCTTGGGGGGCGGCGGCTGCATTTGCAGAGTTATGGCCCGGGAGACGACTTTGCGCGCTTACGAGTTACTGGATTATTGCAGCCAGGCCAGGAGGAAACCCAGTTCATGTTTTGAAATCAGCCTAAACGAGTACTTAATCCGGGCGAGGTCGATTCGGATTGAGGTGGAAGGGGTGGGGTGCACGTCTTTTTCTTACTTCGTGTATAACACGCAAGCTAGTTGGGTGAGGAATGCGCACCCCAAAGCCTCTCGTATGTAAGGTTCTTGAGGATTCCCGGTGAAAAATCCTGGCGGCTTGGGGAAGTTCTCTCCACCAGTTGCTGCGACGGGGGCAGGGCTAACGAGGAAGCCATAAACAGTCTTCTTGCCCTGGGGCGGCGGGGGGGGGGCGGTAAGGAGCGGGAAGGGGGCTCACTGGGAGCCGGGGCATACCTTTTGTGAGTTCATACTTTAGGGCTCAATTTTAAGGCTCTGCCCTTTGCAATTTTGATTAAGAGCTTTCTGCCAGAAATAAGTGCACAGCTGTTGTTTCTCTACCTTAAACTTCTTAACTGTATAAGTTTGTGTCTCTGAGGTCATTCTTGTGTTCTTCAGTGGCTAACATGGGACTGGGTGCAGGAAGAGAAATGAGTGAAGGAATTGAAGGGCTCAGGTCCTGTCCCCCTTAACCCATGAGGACAAGCTGGTTGTTGTGTCGTCCATCCCCCCCCCCTTTTGTTTTGCACTTTCTTAGTGGTGTGCATTACTGGGGGTGGGGGTGCCCCTGAAGAGATCTGAGATCTCTGCTGTGCTGCTTGAAGTGAGTTTCTCACAGGCTTTCCAGGGTCCAGGAAAGGAAGGACTCCAAGGATCAAGCCCCAAGCCCCAGTGACCTTTTTTGAGTGGCCCTGAGTGTGGCCTCTCATTCGCAAATAGAGGCCTGTTTGCTGTTTGTTCTGTTGGAGGCCTTGATGTGCACTGTTGGCTGTAGATCATGAGAGGTGAGGTACAAGCTTGACAGTTCAGGAGGTGGGGGTAATTTCTTCCTGACCTTGCTTATAAACTCCGGGTCCACTGCTTTAGCAAGACACCAGGAATCTGTGGCGATCCAGACCTAGCCCCACATCCGGGGAATTCAGGAGAAAGGCATTAAAAAGCTTTTGTAGGGTGGATGACCAGGGGGTGTGCCAGTTCGTTCATTTCCCTACCTATATATCTATTTACTTTATTTATTTTACTTTTAGGAGATGCCAGGTTTACTTTCACAAAGAGTAACTGCTTTCTTTCCACAGTGCAGTATCCTGTTTTGGAAATGAGCTTTGAATGAGGGATGGAGCTTGTAAAAGTGTCCTCCCTCCCTTAGATGGTGAAAATGGGGGGGAGTGCTGAAAGGAAAGGCCCTGCCTGGCTTGCCTCTACTCCGGCTTCTGTAAGCCTGGAGCTGTGCCCCCAGGGGCTCTCAGGGTTACCTTGTCCACTTCCTGGTTTACTGTGTCACAGCCTTCCCAGGGGAGGGTGGCCCAAGGTCACAAGTGTTACCCACTGTTCAGATAAGTGCTGGTTATCCAGATCTCACCTTAGAAGGAAGAGCCGCGGGGAACTATGAGTGGGAAAACAGGATCCAGTGGAGACCTCCACAATTCAGAAGGTAATAGGAAGTTAAGAAAGCAGTACTCCTTCCCAGGGGACAGCCTTGAAGCTTGTGGCGTCCTTACAAAGCTATCCCCTGCACCTGGGGGCTGCTGTTTGCAGTACATTTTGACATGTGGTACCCTCTCGTCTATTTGTGGTTACTGCTGCGCTATGGGACACCCAGCTGTCTTAGTGTTGGTGGGTTCTATTGCAGGGGAAAGTGCCCCATTGTGGGTGCTCACAAGTTGGTAGTCTCTTTGTAGGCCTCTGGGTTGAAGTAGATCTGGGTCCATGCTGTGTACGTGGCTCAGGCTCTGGTTCTGGCAGTTCAGTACTGTTGGCTCTGGTCTCTGCGTCTCCATATGGCCTGATGACCTTGACCTGGAGATACATTTTGGGGAAGGGCCTCCTTGCCCCCATAAGGCCCAGAGCCCCACAGAGGCTATCATATCCTAACAAGATGAGGACTGGAGAAGGAGGGGCTACTAGCTCCAGTGTCATTGGAAGTTGGGCTTCCTGACCCATGTCTGGGCATTTCCAGAAGTCATACCCAGACACTGTGTGTGACATATAGAGGAGGATTCTGGTGGGACCTGTAGTCAGGTGGAAGGGACATTTGGGTCACAGGCATTAAACCGCAGGTCTTAGGTGTGGGCTGGCCTCAGCTTCCTATGTACATTGTGTGAGTTCTGCTTGTATAGTTCTACCTGTGATAATCTGCTTGGGTGCGGTTGCATTGCATTGGGCACCCAACTCCTGCCATTGGGCTTTACTATGTCTCTACTGTGCTTGCCCTGTAGGTTATGGCAGAGAGAAGAGAAGTTGACTGAGCTCTTCAGGTAATGCCCTCCCCTGGATAGTGCAGCCTCATAGACTGAGGGTAAGGTGGGTTACCACTCAGCCCCTGGCTACCCACTAAATAGAGCTCTGGAGAGCTGCCCCAGGTTACGGGAGCCAGGGCAGTGCAGACCACAGGACTCAGGAAGCAGGTGCCCTTGTGGTGCTTAGCATTCTTAGCTCTGCCTCAGTCTGGTTTTGGAACGCGTGGAGCCTGTCTTTAGTGGTCTGAGAACAGGGCAGGATAGTACCCCTGGGCTCCTGGCCCTGTGACCACCTGATCATGTATTTCTTGTCCTTATGGTCTCCCAGACCACCACATTTCTCAGCCTGCCTTCCCGTGTGGTCTAATGAAAGGGGTTCCTCAGGGCCTCCAGGTTGGATGAGGGAGACACTTGGGAATAAGGGCTGATCGAGGCGGTGGCCTTCTCTTGCTCCTGGCTGACTGGCTGGGTGGGTGGAAGATGGAAGAGGTGGTAGTTGAGCTGCTGGGCTCTGAATAGTTGCATTGACCCTCCTGTCCTAGCCCCTGATCTTGCACTGGAGGTGTTCAGAGAGGAGGTGAAAAAGACAAGGTGGCAACCCTTGGGGACTTTGGTTGACACACCTGTAAATCAGGCCTTGAGTTAGCCATTCGTCATGCAGCCCAACAGGAGAGTGTTTCTTCCTTGACCCAACATCCAGGTGCTGGGTGGGCCTGCTGCCCAGCTTTGTTCTGCAGTGTTCTGCTGTTCAGTAGTATCAGGATTCCTGAGCCTTAGTGCATGGTGGGCCACTTCAGGGGCTCCCTGCAAAGGTACTGGGACTCATTATAAGTCCCAGGTGCATGATCCACCTTCCCTCTGCAGGCAGCTTAAATGTCCTCAGAAGAGTGTAAGTGTAGGGTGGCTATGCTGTGGTGATTCAGAGGCTGTTCTGGAGGCCACAGTCTCCAGACGAAGAGAAGCTTCCTCTGGTGGACTGCTGGGATATGAAGCACCAAGGCCTAAGAGCCTGGGGCTATGGTGACAGTTGGAAGTCAGAGGTGTGGTGATTGGTGACAGCTGCAGCCACTGAGCCTTATGTGCCTTTCCATAGGACAGCCATGGGTTCAACAGAGCTGACCCTTCCTGGGGTGGGGTGTGTTCTTTCAGAATTGAGTCTCCTGCCAGACAGAGCCAGGCAGCTGTTAGAAGCAGGTGTGATATGACCAGGGTGAGCTTGGTGTGCTGGCTAGGGCTCCCTAGCAGTGAAGGTCAGGCAGTTCCACTCAGGAGAGTCCACAGTGGCCAGGGAGGCCCCATTTAGGCCCCTGTCTGCCTTGAGACTCCAAACCATGTTCTTCTCCAGGCCTCACTGTAATGAACAGTTGGCTCTGTCTGTCACAGAAGCTGGCCCAGCCTTAACAGATCTGTTTCCCCAGGCTTGGAGGGCCAACACTAGGGTGACCCTTCCCAGGACACTTAGCTGGTAGGTGTGCCAGTGTGAAGGCAGCAGCCTGCAGCATTGTGGAGCATTCATGGGGACAGTGGTGAATCTAGGTAGATGGTTCTGTTGGAGCCTGGCTCTGGCTCCTCCTGCCTGGGCCACAATAGGTCTCTGTTGTCCACATCTGAGTGGCTCCTTGCCTACCTTAGGGGTGGAGTTCATGGGATGTCCACCAATGTATTGGGATGAGCAGAACAGCAAGGACCTGGGGCTAAACTTGGACTACTAGGGTTCCAGGGACTCAGACAGCCGGTGTAAGGAGGGACCCTTCAATATAGGGTTCCCCAGCTCTATGTTGACTCCAGGGGAATGAGAAGACTAGGCATGGAGATATGGTGAACTTAAGTATGGCTCTTGCTTATCACAAAAAAACAGCCTCTTTTTGTGGGTAGCGATGGAGACTGACTATACAGAGCCCTAGCTGCCCTAGAACTTTCTATGTAGTCCAGGCTGCCTCCTGCCTCTGCCTCTGTCTCCTGAGTGAGAAATCCTCTTTAAGGCATCTTGAGGCTGGTGGAGCAGCAGGTGGCTGGCTAAGGCCCTACTCTTTTGAGTCCCCTATTAAGATGTGGGCATACCCCATATTGCTTTCTTTCTATTCTGATGACCCATGCAGCCACATCAACCCCGTCTGTGCTGCTTCCTCCCTGAACATGCCCCGGGGCCACTTTTTGCAGAGCTCAAATGTCCCCAGCTGTAAGTCCCTGACCATGGCCCCTGCCTCTCCACCACTTAGACCTTCTGGAGTCTCTGGGAGGTGGAATGGCCCTGCTCCTTCCTGACTCCCACACACCTGACCAGGGCAGCCTTCCCTTCCCGGGGAGATAGCCCTCACAGCTTGCCTTGAAGCTCAGAGTAGAGGCTTCTTCCCTGGGTCCCAAGAAAGGCTTCCCAGGCAAATCTGTTTCCAAAGTCTGGCAACTGCCCAGGGGCTGGGCTGGCCCAGGGTTAGCATAGGGAAAGGTACTGTGTGCTGGCGTGAGTAGCTGTGGAGCTGACCTTTGTCAAGCCTGAAGGCTGGGTTGTATGTAGTAGGTGCTGGCCCTCATGTCCCTTCTGTCCAGTAGTGCTTGCTTGGCGTGAGTGGGGAGACCTGAGCCCCACAGCTTGTAGGTTGACAAGAGAAGGCTCTAAAGTTACATTGAACTTTTTGGGTGTTTTTCGTGGTGATAAAATTGCAGGTTCCTCCTACCCCCTCAGTATCTGTCCAGGGCCCCTGAGCCTTGGCCTCTCACCTTTGCTGACTTGTCCTTTGGACTTAAAGGCTGGATTTCTGCTTTTATTCTTCAGCCTGGGGATTGGGGAGTGGCCTGCCTGAAGCCATGCAGTGAGACTGGGAAACCTGCAGGGTTAAGGCCTTCCCTTCCTGTCCTCTGTCCTGCATGGGTTTGTAGGGAGAGTGAATGGGGAGTGGACTTTAAGCCTTTCTTGCCTTTTCTTGGTGTGGTGAGGAGGCTGTCATCAGTGTAAGGTATGAATTGGCTCCACACTTTCTGGGTGGCCCCCTGCAGCATTCAGGTGTTCCTCCGTAATCTCAGTAGAGACTTGCTACAGGTTTCCTCTGGTATTTGTTGTGGGCCTCTGTGGTCTGTCTCAGTTTCCACATTGGGTGGTTTCACATCCTCTTGAGGCCAATACCTCCTCAGATGGACTTTCACACACACTTGCCTGAGGTCTTGCCCACGGTAGATGAGTCTTGTGCTGTCCTGGAGGCCCAAGTAAGGGGATTCCAGGGCTCTTGAGAAGTCAGACTCTGCAGAGTAGCAGGCGTGGGCAGGTGGGCCTCAGTGAGGGCTTAACCCTTGTTTTGCCCATGACATACTGGCTCCATCTCTGTCGTGCCTGCTGAAGCAGTTGCTGTGAGTGTCAGTGACACTCTGTAGCTTCTGAAGGCCAGGCCTTAGAAGGCTTACATACAGCTTCTGTGTCCCGGCTTTGTCAGGATCAGCAACAGGCAGGAGGGTGGCCCCTGGGGGTTGCTGCAGTAAAGAGCTGTCTGGCATTCATTGGCTGTCAGTGGGGCTGGGTGGTCAATGCCATGCCCCACCAGCTAGCTGCTTTACTGTGTGAGGCTCTGCCATCCTATGTGTGCACCTCTTTGGACTGGTATCTAGGGGACTGGTTTCCAGACCCATGGGCACCAAATTCGCAGGACCATCTATCTGTACCTCAACCACAGAGCAACCCTAAGGCACCCTGAAGCCCCTCATGCCTTTTCTGGAGGCAGGTGGGGCTCAGGGGAGATTTTGTGGGTTAGAAATGCCCTTAAAGGCCGGGTGTGGTGGCACACACCTTTAATCCCAGCACTCAGGAGGCAGAGACAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAAAGAAAAGAAAAGAAAGAAAGAAAGGCCCTGAAGTCTCTTTGGTATTCTTCTTTAGCTCCAGTCCTAGCTAAGCCTACCTGAGGCCATGGTTCCCTGCCTCAGCTTTTAGAAGGATGTGGTCCTTAGGTCTCACTGTTGCTGGTGGGAAGTCTGATTTGTCCAGGCCTCCATTTGTCTTCTGCTTCTTGCATCATGCCATCAGGCTCCAGACACTCTGATTCATGGACTGTGCAGTACAAGTCCCTAAAAGATAAGAAGCACGTGCCTCTCCAGTAAGGGTTTCCGCAAACGCGTCCACGGCACAGGCTCAGTCCTGAGAAGCTCACCTTAACCCAAGCCTGCTTCCTGAAGTACAGAATGGAGCCTGGAGGTCTAAGCGAGGGGATCCAGAGTTCTTCTGTATGAAAGTCGGCCCTGGGTACCACAACCTTCCTTCTGCAAGATCACTGTCCTTATTCAAAAGCTCTTAGCAACAGGCCCTTGACCATTTGGCCTTTCCCAACCACAGAAGGTGATGTTTGATTGGGGTGTTCCCTTAGGCCTGGGGCTAGGGATCTGCATAGGAGGGACTCTCATCCCTATAGAGTACTATAGTGTCCACTGGTTTACCAGTCAAAACATGTGACCCAACAAGAGGTAGATCATAGGATCAGCCAGCCTGAGCTTAGTGAGTTCCAGACCAGCCTGAGCTGTAGAGTGAAACTGTCTTGAGCTAAAATAAAAAAGGAAGGAAGGGATGCCTCTGACCTACATGCTTGTGAGCATTGCAGAGGTATGTCCATCAGTGAGATAGAAGGCCCCAGACATGGTCGGCTTGCTGGCATTTCTAGTTGCCACGACTCCCCTCCCTGCCAGCCTTAGAGACTGGGCTTTTAGGGTTCCACTGAAGCTCCTTCTTGTATTGTTGGGGGTCTGCATATTTGAGTGCTCTGGTGTGTGTTGGACTGTGCCCCTGATGGTCTGTCTGCCTCTGCTGTACTTATTAGAAGCCTTGGCTGTTCCCAAGTCTTCACCCTGATGAGCAACTTGGGTCCACCATGGGGTCAGAAGGCCGCTTCTCTTCTGGGTGGTGGCCTTTACCACACCTTTAATCCCAGCATTTGGTAGGCAGAGTCTGAGTTTGAGGTCGGCCTGGCTTACAGAGCCAGTTCTAGACTACACAGAGAAGCCATGTTTGGGGGGGGTGGGCTGGAAAAAATCCAGAGAGAGGGGTTGGGGAGAGGGAGAGGAGAGGGGTGAGGGGAGAGCAGGAGAGAGCATGAGCAAGCAAGCTGCTTCTCCCGTGGGAGATGGCTTTCAAGGAAGTCCATGACTCTCCTTTCTTCTCAGGTTCTGGTGTCTGGTTCACTTAGCTTTGCTGTCTGGTTGGTTGAGGGTTGCTAGGCATTGATGGGGGAAGGTCAGGCCAGGCTTACAGTGGACCCTGCAGCCTAGGCATGCCAGACTGAGTGTGCTTTGAAGGGGAGTATGTGGACATCTGACTTAGTCCTTAGGGATGGGACTGAGTCAGATGTCCACCTATGCCAGGGAGCTTAGGTCCCTAATGGTTGGGATCTTATCTCTTAGCCTCTGTCTCTGGTGGTCCTGGGAACTAGGCATCTGGGCTCTCCCACGGTCCCTGAACCGCACCCTGTCACCCTACTTGTCTCCATCCCAGGCATTAGGGCATTTTCAGGAGGTGGGTTCCAAGACCTGGGTATGGAGAGGACTGTGACCATCTGCCTTCCTCAGAGGAGGCCTTTCTGCAACCTCAGAGCCCTTTCAGTGTGATGGGTCCCCCAGGTCAGATTCATTCTCATGTCCCAGCTCCCCAGACCTACACAGTAGCAGGACCAGTCTTTGTTCCTAGGAATCTCATAAATTATATGAGAGCATCAGCTTCCAGTTCTACACTGGCCATGGCCAGCTTGTGCTGCCTGAGCCCTGAGTGCTTAACTCCAGGCTGACAGCCCCATGGAAGAGAAAAGGACACACCATGAAGCTTTCAGGTAGCAAGAATGAATCACAACATCTACCCTGTGACCTCACGCTGTTTAGGTTTCAGTAAGTTCCAAGGAGGCCTTGAGAGCACATGAGCCTAATGAAGGCCAATGGGGCTACAGCAGCTACACGTTCCAGGGCCCTGTCACCTCAGGCTCCGCTGGAGAGTTTTTAACCTACAAGTGACTTGATCCATTTTAACAGGCTTACCTCCTTTGTGTAGGGCCTGACAGTCTGATGATCCCAGTGAGAAGTGTGGAGGGAGAAATGACATCCTGGTGGGTGGACAAGCCAGGCTTGTGCCTCGGTAGCCTTTGGTCTTCAGGGGAGGGAGGACATAGTTTCATGGCTGTTGGCACTGGTTGGAGGGCTGCTTGCCCCCTGGGGCTGTGTGCTAGGTGTGGTGATTCTAGGGCCTGTGAAGTGGCCCACTGTGGGTACTGGGGATCCCTGGAGTCTCAGAGCAGATACAACTGGCACCCCAGATGCTCAGAAGCACTTTCTGGATACAGGGTGGGTAGTAAGAGTGGCTTGACTGCTGACACGTCTGATGTGCCCTGAGCTACAGTGGAGGGCGTGGAACCTGCTGAGAGTATATGACGCCACACGTTTAGCACCCAGCCTTCTCCAAAAGAGCTTCAGATTGCAGCATTTACAGTCTTTGTGGTGAGACTTTAAGGATCCCTCAAGTGATCTGAGAACCACTGGTCCTGGAGTAGACTGGACATCTCACCTCTGGGTGTCCCTGTGAACATTGGTGTGTGTCCCCAATGCTGTGTGATAAACAGAAGCACATAAGAAAGTCTGGAAGACACCAGGTTCACAGATAGGCACAAGGCCCCACATGCAGTGTGGAGCTCGTGCTAAGCCTTCACCAGTGGAAGTGGGTCCATAGTGCACACACAGTGCCAGCTTCCTCCTTGGGGGATAGCTGCTAAGCTCTTGCCACTGTCCTAGGGACAGATCTGACTGAGCATCAAGGGAGTGAAGAAAGGACAGGCAGATAAGAAAATAGCTGGAAGTAGGTGGGCTGGGCTCTTTGAGGGAAAAGCTGTAGCACCCTAGAAGGTCAGCATGTTTGTTGTATACAGTTGAACAGGAAGGTGGGGTTGTTGCAAACAGTTCAACGTGGAGGCAGGGTTTATGGTATGTATACAGCTGGGTGGAGGAGTTAGGTTTAGTTGCTGTAAGAGAGTGACTTAAGTATCTGAGGGGAAGAAGTTTTCTGCACACATGGACGAGAAGAAGACTTCGATATTCCTTTCTGAAAGAGTGGGTATGGCTTTGCCATTCCTCCACGAGTATTAGGCTGTGGTTGTGCCTATGTTAACAGCACACACATTTACTTGAGGGTTTCTGCTACTTCCCACAGACGGCAGGGATTTGTGTGTTGGAGTAATGTTGTATGTTCCTGTAAGGCACCCCCTGTTTTACCCCCTGACAGCGTGTCCTTCCCACAAAGTACACAGTAATCTTACTTCATGCTGCCTCTACTTTTTTTTTTTAAGATTTATTTATTTTAAATTTTATTTATATGAATACACTGTAGCCATCTTCAGACACACCAGAAGAGGGCCTCACATCCCATTACAGAAGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGAAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCGCTGCCTCTACTTTTACAACACCTTCATTGTAGAGTTTGTGCTGTGTGGTGCCCCAGCATCGGTGCTGAGCAGCAGGGACACCATGCAGTGGAGGTGCGCTGGGAGAGCTCTAGCAGGCCTCTGTGGAGCAGAGACACCCTGCATGCTACCAGGATTGCACATTACCCTTGCGTTTCTGATGGTCCCGGCTTCTCAGGGATTTGCAGAACTGTCATGAACAGCTTTGTATGCGGTCAGCATTTCTGACATCTAGACTAGGGGATTATGAAGTGGCAGAATGTATCATGTTCGGGGACTGAATACACAGGTGGGATATAGAAGAGGACCACAAGTTGGGTTCACCCTCTATCACCATTCTGATTGGATGAGGGACAGGCATGTCACAGCCAGCCACCATCACAAACCCCAGCTGGTTCTCCTGGTTACATTAGAACCTCATGCCATGCCCTGCTCAGGGCCCCAACACTGTGCTAGGTTTAAGTCTGCAAACTTCAATTGTTGCTCATCTCTTAGCTAAGCTGTTGGATACATGTTGTCCTCTAACCCTGAATTGTTCAAAACATTGCCACAGCCAAGTAGTTGAGGGTCTGGTAGAATTGAGCCAGTCTCAGTCACTCAGGGTAGCTAGGAGCTGAAAGTGACTTGGTCCTTCGTATTCTCCCCACCCTCTTTTCTGGGAGCTGGTGACTCATGCTTGCATTTTTCCCAGGTAGAAGAGCCATGGCTAGGGTGGCTCTGAGGAATGCCACAGCTACACATCAAGGTGGTAGGGAAGGCTGTGTCCTTGCTCAGGCGGAGGCTCTAAGTGATAGATAGCTTCTCTGCTTTCTTCTGCAG
Seq C2 exon
GTGCCTGATTGGGCCCAGAAATGGGATGCCAAGCCTCCACGAGGAGCGCCTCTTTGAGCTGCTGCTGTGACAGCAAGTGACTAAGCTGCCAGAGGATGTCCACTACAGCGGCTGCCCCCACGGGGATCCCGGCAGTCCCGGGCCCCGTGAACCCTCCCCCACCTGAGGTCTCCAACCCCAGCAAGCCCGGGCGAAAGACTAACCAACTGCAGTACATGCAGAATGTAGTGGTGAAGACACTCTGGAAACATCAGTTTGCCTGGCCTTTCTACCAGCCTGTGGATGCAATCAAGCTGAACCTGCCT
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000026918:ENSMUST00000028282:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.442
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0043920=Bromodomain=PU(33.3=41.4)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types