HsaINT0023594 @ hg38
Intron Retention
Gene
ENSG00000154479 | CCDC173
Description
coiled-coil domain containing 173 [Source:HGNC Symbol;Acc:HGNC:25064]
Coordinates
chr2:169681007-169694433:-
Coord C1 exon
chr2:169694261-169694433
Coord A exon
chr2:169681234-169694260
Coord C2 exon
chr2:169681007-169681233
Length
13027 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGC
5' ss Score
9.6
3' ss Seq
CATTTTTTACAATTTATTAGAAA
3' ss Score
4.27
Exon sequences
Seq C1 exon
ACTTCCGGCGGCGTTGCCAAGCAACCGCGTGGTACGAGTAACAACTCCACCGGCTGGCGTCCGCGGCGCTTGGCGCCACAGTCACTTTTCCAGATCTAGGAGCATCATGGACACCTCGTCAGAGATGCTGGTACGGTTTGGACGGCGCTGTGGACGGGCGAAGGAAAGTACAG
Seq A exon
GTGAGCTAAACTGACCTATCCAGGGACAGGGATTGTTTCTGGACCCCCGGCATGGAGTGAGAGGCGAGGATGCCGAATGAGGGCTTCAGTTGCCTTTTGAAATGGACTCCACCAGGTCGAAAGCATCCTCAATAAGCATCTTTGGGCTCTGTGTGAAGTTAGGCCGTCTTGCCCTCAGGTGAATGGGTGAAGGAGGGAAACGGGGAGTGGAAGTGGGTGGGAGAATGTTTACAGAAATAGGGGTGGAGAAAAGATAGGAAATCAGAGACCCCCACCCCCAGCCCCAGCTGACCTAAAACTGCGCAGTTGCAGCTCTGAGAGTCTGGGTTTTGTTAAATTTCCCGCACGCTTAAAGTTTGTTATTCACTGATTGAATTGGAATATCTCTTGGAAATATAAGTCACCTCTTTAGAGGCTTGGCTCTTCTGCAAACCTGCTGATTGGTCTTTACTAAAAGTCTCTGAAGGAAATATCTCCATTTCCTCCTCTCTAAAGTAAATATAAGGTCTCTCTCTAAGTCAAATGCTTTTAGAGAGTTAAAAAAAAATCGTGTGACATAAAGTACTGTAATTCAGGTGACCTGTTATAACAATTTGATTTTGGAATAGAAATAGACTTCTAAAGAACTCTATCAATTCTAGCTACAACAGTTTCTTACGTCTGTAAATTAGCAATTAATGTTGTCATGGTGACAACTAGAACTTTGGCAATTTGAAGTATCTTCATGTCATTGCCCGAGCTTCTGTAGCAATAGTGCCCCCTGCACCAGATGCAGAGTGACAGCCAGTCATTCTTCACTAGTGGATATTTATGCAGTGGAGGTTTTATGAGGTTAGCAGCGGACTTTTGCCATGTAAAAGGAAAGAAACAGTACCAACATGGCCAGTTTTGGAAAAGCACAATTAGTCCCACACATTCACTTTCCTGCATATGCATTTCTGCACTACCTGGTTTAGATTTACCTAATAGTTGTTAAATAATGTTTTGTGGCAACTAGCTCAAAAGCTTCCACCTGAGCCTCACTGCTAAATTTTAATCTCCATTTTTAGGGGAAGGCTAAGTTGGAGAGAGGTTCAGAGATGTGTGCAGCTATTAGTAAAATAAATAATTTATAAAGATTTAGTGGGATGACATCAGCCAGAATGGTGAAATAGGATCTATGCCTGAAATCCTCTCCTCCATAAAATCAACAAGAACAGTGGCAAAAATCATCAATATCGACTTTTTCAGAACTCTGGAAATTAACCAAAGGCTTGCAACAATTTGTAGAGTGTTTACTAAAGAAAAACAGCTGGATTTTTGTAACAACAGCAAGGTTTTTGGCATTTTAACTTGCCATAGTCCTATACTTTTCTCCCAGCCCCGTGTCAGCCTAGATAACCACAGTAATCACAGTGAAAAATAGTGACTTAGCAACTGGTAGAGGGGACAAAACAGAATTTGACCCACTCCAAAGCCAGACAACTGTTATTATTCGACATGTTTGATAGTTCCTTGGAAAATCTCACTCATGAGGCTTATTGTTATTTAGTCTGACTTCAAACTCACCAAGTATGTTTGTCAAATGTTCAGTGGCAATTTTAAATATCACAGCTATCAGAGGCATGTGTGGGAACTTAATCCCCAATGTAAAAATGTTGGAAGGTAGGGACTAATGAGAGGTGATAGGCCATGAGGGCAGAGTAAAGGGATTAATGCCATTATCTGGGGAATGGGTTCATTATAAAAGTGGGAAAGTTGGCCCTCTTCTTTCTCTCTCTCTCTCTCTGTCTCTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGCCTGTTGCCCTCTCTTTGCCCTTTTGCCATGTAATGCCTTCCATCATGTTATGATGCGGCAAGAAGGCCCCTGCCAGATGCTGGCACCTCGATACTAGCTTTCTCAGCCTCCAGAACCATAAGCCAATAAATTTCTATTCCTTATGAATTACCGAGTCTCAGGTATTCTGTTATAACAGCATGAAACAGGCAGGCAGTGATACAGTTGGGAGGCAAACAACAAGCTGACCGAAAATCTTAAAAGGATCAGTTGGGAAGTGATATGTCCATAGGGGGCTTTGGAAAGCTCCTGACATATTCCTGGGAATCTAGAAGGCCAAGTGCATGCATAGAGCTATGTATATGCCCAGGAAAGACCTGCAAATGCCTCTCACCTATGACTTACCTTGAGACTCTGTTTAAGAAAGAAGTAGAGGCTAAGATGGAGTTGTAAATTGCCTGCCCGAGCATTGAAGGCATGCCTTAATACTCATAGACAGTCCTTTGGCAAAGACTGGGAGACTTGTTAGTTCCAGTCATCCAAAGATATGTCTGTCTAGTTATTAGCTGACCACTAAGCAAACCAGAGACTGCAGTGACTCCAGTGGCCACATGTGACAAAGAATACAGACTACAGAATTGGTTCAGAGAAGTCCTGAAACAAACAACAACAGCAGGAATGAGAAACTTTGGGTGTATGTAGAAATCTGATTTCCAGAGTTGACACATATATGTACAGTTTTTAATAAAAATTATGAAAGATGAAAAGAAATAAAGTATGACCCAAACACAAGAAAAAGGTTTCAATAGAAAGTGTCTTTGAAATGGACTCCACCAAGTTGAAAGCATCCTCAATAATCATCTTTTGGCTCTGTGGAAGTCTGGCCATTTTGTGCTCAGTTGAATGGGTGGAAGAGGGAAAGGGGGAGTGGAAGTGGCGGGGAGGATGTCTACAGAAGTAGGGGTGGACAAAAGATAGGAAATCAGAGACTGCCCCCCCAACTGACCTAAAACTGTGCAGTTGCAGTTGTTGTAAGCCCAGATGTTGGATTTACTAGATACAAACTTTTGTAAATTTATAGCTATTGTAAATATATTTAAAGAACTAAAACAAAAGTCTAAAGAACTATAGAAAAGTATTAAGAATGTTGTCTTACCAAATAGAGGATATCAATGAATATTTAAAAAAATTATAAAAAGGAACTGAACAGAAATGTTGGAGTTGAAAAGCACAATAACTGAATTAAAAAATTAACTAGAGGGATCAATAGCTGATTTGAACTTGCAGAAGACATAATCAGTGAACTTGAAGATAAGTCAATTGAGATTATTCAGTCTCAGAATAATGAGAAAGAAAAAAAGATAAAAGAATGAAGAAAAATGAGCAGATCTTCAGAGAAATGTAGGGCACCAGCAAATATGCCAACATAAATGTAACTCGAGTTCTGGAAGAAAAAGAGCAGAGAAAGGGGTAGAAAAATTTGAAGAATTAATGGCCAAAAGCTTTCCAAATTTGATGAAAAACATCACACAATCAAAAGGCTCAGTGATCCTCTAAGTATGGTAAACTCAACTCAAAGAGATCAACAGCTGTACACATCATGATCAAACTGTTGAAAGCTAAAGACAGAGAAAATCTTGAAAGCACAAAAGAGAAATGACATTACATAAAAGTAATCCTCAATAAGATTAACAACAAATTTCTTATAAGAAATTATGGAGTCCAGGGGCAGCAGGCTAATATATTCAAATTACTGAAAGAAAAAGTCTTCAAGAATTCTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACACCTGGTTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGCGTGTCTCAAACTCCTGACCTCAGGTGATCCCACCTTCAATTATTAATTGAAAAAATTCTCACAAAGAAAAACTGGGTACCAGATGGCTTCATTGGCTAATTCTACTAAATTTTTAATGAAATATTAACATAAATCCTTCAAAAACTTTTTAAAAAATAAGAGGAAGGAGCACTTTCCAGCTCATTCTATAAGGGCAGTATTACCCTGATACCAACATCAGACAAAGATATCACAAGAAAACTATAGATCATTATCCTTTATGAATAGAGATGCAAAAATCTTCAACATAGTTTTAGCACATGAGCTAGATGTGGCACACACCTCCCAGCTACTTGGGAGGCTGAAGTGGGAGGACCACTTGAGGCCAGGAATTTGAGGCTGTAATGTGCTATGGTCACACTTGTAAATAGCCACTGCGCTCCAGCCTGGGCAACATAGTAAGACCCCATCTCAAAAAATAAGTTAATTAATTAAATAAAATACTAGCAAACCAAATCCAACAACATATAAAAAATTATTATATACCATGACCAAGTGGTATTTATCCCAAGAATGCAAGGTTGGTTTAAAAACAATTAATGTAGTACACTGTGTAAATAGAATAAGGAACAAAACTACATGATTATCCTAATAGAAAAAACATTTGACAAATCTAACATCCATTTATGATAAAAACAACAAACTGGGAATAGAAGGGAATTTTCTTAACCTGATGAAGGAGACCTATGAAAAGCCCATAGCTAACATCATAGTTAATGGTGATAGACTGAAACCCTGATCAGGAAAAGAAAAGTATGCCTGCTTTCGTCACTTCTGTTTAACATCATACTGGAAATTCTAGCCATGGCATTTAGGCAAGCAAAACAAAAGGCCATCCAGATTGGAAAGGAAGAAATAAAACTTTCTATATTCACAGATGACATGATATTCTATATTAAAAATCCTAAAGAATGTACTAAACATTTATAAGATCTAATAAAGTTTAGTGGCATTGAAAGATGATCAGTTTACAAAATGGTATTTCTGTACACTTGCAATGAAGAATCTGATGATGAACTTAAGAAAACAATTCCATTTACAATAGCACCAAAATACTTAGGAAAAGTTTTTATTTCTAAAGAAAAATACTTAGGAATAAGCAAAAATTTACCCTTTAAAAAACTACAAAACATTATTGAAAAAATTAAAGATATAAATAAATGGAAAGACATCTTGATATAGTTTGGATGTGTCCTGACCCAAATCTCAACTTGAATTGTATCTCCCAAAATTCCCATGAGTTGTGGGAGGGACCCAGGGGGAGATAATTGAATCATGGGGGCCAGTCTTTCCCGTGCTATTCTTGTGATAGTAATTCAGTCTTATGAGATCAATGGGTTTATCAGGGATTTCCACTTTTGCTTCTTCCTCATTTTCTCTTGCCACCACCATGTAAGAAGTGTCTTTCAACTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTAGGTCTAACTAAACCTCTTTTTCCCAGTCTTAGGTATGTCTTTATCAGCAGTGTGAAAACGGACTAATACAGTAAATTGGTACCAGCAGAGTGGGGCATTGCTGAAAAGATAACTGAAAATGTGGAAGTGACTTTGGCACTGGGTAACAGGCAGAGATTGGAACAGTTTGAAGAGCTCAGAAGAAGACAGGAAAATGTGGGAAAGTTTGGAACTTCCTAGAGACTTGTTGAATGCCTTTGACCAAAATGCTGATAGCGACATGGACAATAAAATGCAGGCTGAGATGGTCTCAGATGGAGATGAGGAACTTTCTGGAAACTGGAGTAAAGGTGATTCTTGCTATGTTTTAGCAAAAAGACTAGCGTCATTTTACCTCTGCCCTAGAGATTTGTGGAACTTTGAGAAAGATGATTTAGGGTACCTCGCAGAAGAAATTTCTAAGCAGCAAAGCATTCAAGAGGTGAGTTGGATACTGTTAAGGGCATTCAGTTTTAAAAGGGAAACAGAGCATAAAAATTCAGAAAATTTGTAGCCTGATCTGGCAGAAGAAATTTCTAAGCAGCAAAGCATTCAAGAGGTGAGTTGGGTACTGTTAAGAGCATTCAGTTTCAAAAGGGAAACAGAGCATAAAAATTCAGAAAATTTGTAGCCTGACTATGCAATAGAAAAGAAAAACCAGTTTTCTGGGGAGAAATTCAAGCCAGCTGCAGAAATCTGCATAAGCATCAAGAAGCCTAATGTTAATCCCCAGGACCATGGGGAAAATGTCTCCAGGCCATGTCAGAGACCTTCACAGCAGCCCCTCCTGTCACAGGCCCAGAGATCCAGGAGGAAAAAATGGTTTTATGGGCCAGGACCAGGGTCCCTGTGCTGTGTGCAGCCTATAGACTTGGTGCCCTGTGTCCCAGCTGCTCCAGCCATGGCTGAAAGGGGCCAATGTAGAGCTCATGCTGTGGCTTCAGAGGGTGGAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAGCCTGTAGGTGCACAGAAGTCAAGAATTGAGGTTTGGGAACCTCCACCTAGATTTCAGAAGATGTATGGAAATGCCTGGATGTCCAGGCAAAAGTTTGCTGCAGAGGCAGGGCCCTCATGGAGAACCTCTGCTAGGGCAATGCAGAAGGGAATTGTGGGGCCGGAGCTCCCACGTAGAGTCCCTAATGGGGCATTATCTAGTGGAGCTGTGAGAAGAGGGCCACCGTCCTTCAGACCCCAGCATGGTGGATCCACTGACAGCTTGCACCATGCGCCTGGAAAAGCCGCAGACACTCAATGCCAGTCCGTGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAGGCCACAGGGGCAGAACTGCCAAAGACCATGGGTCCCCACCTTTTGCATCAGCATGACCTGAATGTGAGACCTAGAGTCAAAGGAGATCATTTTGGAGCTTTAAAATTTGATTCCTGCTGGATTTTGGACTTGCATGGGTCCTGCAGCCCCTTTGTTTTGGCCAATGTCTCCCATTTGGAATGGCTGTATTTACCCAATACCTGTACCCCTATCGTATCTAGGAAGTAACTAGCTTGCTTTTCATTTTACAGGCTCATAGGCAGAAGGGACTTGCCTTGTCTCAAATGAGACTTTGGACTATGGACTTTTGGGTTAATGCTGAAATGAGTTAAGACTTTGGGGGACTGTTGTGAAGGCATGATTGGTTTTGAAATGTGAGGACATGAGATTTAGAGGGGGCCAGGGGCAGAATGATATGGTTTGGCTGTGTCCCCACCCAAATCTCAACTTGAATTGTATCTCCCAGAATTCCTACACGTTGTGGGAGGGACCCAGGGAGAGGTAATTGAATCATGGGGGCTGGTCTTTACCATGCCATTCTTATAATAGTGAATACGTCTCATGAGATCTGATGGGATTATCAGGGACTTCCGCTTTTGCTTCTTCCTCGTTTTCTGTTGCTGCCACCATGTAAGAAGTGCCTTTTGCCTCTCACCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAACTAAACCTTTTTTTCTCTCCAGTCTCAGGTATGTCTTTATCAGCAGCATGAAAATATACTAATACATATTTCATGTTAATGGGCTGGGAGATTTAGTATTGTTAAGATGGTTTGAATATTTGTCCCCTTCAAAACTCATGTTGAAAATTAATTCCCAAAATGACAGTATTGAGAGGTGGGGCCTTTAAGAAGTGATTGGGTCATGAGGGATCTGCTTTCATGAATGGATTAGAAATGGGGTCTTGCTGTGAATGGATTAATGGCTTATGCTGGAATTGAGACTGTTGGCTTCATAAGAAGAGGAAGAGAGATCTGAGCTAGCATCCTCAGCCCCCTTGCCATATGATGCCCTGCATTACTTCCAGACTCTGCAGAGAGACCTTACCAGCAAGAAAGCCCTCACCAAATGCAGCCCCTCAACCTTGCACTTCTGAGCCTCTATAATTCTAAGAAATAAAATCCTGTTCTTTATAAATTATCTAGTTTCAGGTATTCTGTTATAGCAACAGAAAATGGACTAAGACAGATGGCAATACTTCCCAAATTGATCTACACATTCAACACAATTCCTATCAAAATTCTACTTGGCTTTTTTGTTGATATTGACAAGCTGATCTTAGAATTCATATGGAAATGAAAAGGACAATAGAATAGCTAAAACAATTTTGAATCTGAAGAAATATTAATAAGTAGGAGGACTCACGCTTCATGATATTAAGACTTACTACAAAGCTACACTCATTGGCTGGACATGGGAATGTGCACCTATAGTCCCAGCTACTCAGGTGGTTGTGGCCAGAAGGATCACTTGAGACCGGGAGTTCGAGGGTGTAGTGCACAATGGTTGTGCTTATGAATAGCCACTGCACTCCAGCCAGGGCTACATAGAGAGACCCTGTTTCTAAAAACAATAAAAAAAACTACAGTCACCAAGAGATTGTGGTGTTGGCTTAAGGAAAGACATATAGATGAGTGTAATAGAAATAATGAAATAAACCCATACATCTATACTAAGTGGGTTTTGACAAGAATGTTAATGCAATGGGGAAAGAGTAGAATTTTTAACAAATGGTGCTGGGATAAGTGGATATCCATATGCAAAATAATGAATTTTGACTCCCAAATTTATAGACACCTCACACCACATACAAATATTAGTTTGAAATGAATCATATAACTAAATATAAAAGCTAGAACTATAAAACTATTAGAAGAAAACTTATACATACATCTTTATTATCTTGGATTAGGCAACAATTTCTTAGATATGACACCAAAAGCACAATCAACCCAAGAAAAACAGATTTGGCCTTCCTCAAAATTAAAAACTTTAGTATTAATACATCAAAGAACACTATCAAAAAGTGCAAATACATCCACCGAATGGGAGAAGATATTTGTAAATTATATATATGCTAAGGATCTATAATCCAGATTATAAAGAATTCTTACAACTCAACAATAAAAAGACAGCCCATTTTTAAAAAGGGACAAATGATTTGAACTGATATTTCTCCAAACAAGATGTATAAATAGCCAATAAGCACATGAAATGATGCTCAACTTCATTAGCTATTATAGAAATACAAATCAACACTACAGTGAGATACTACTTCCCACCCACTAGGATGAGTGAAAAAATAAAGGGACAGTAATAACTGTTGGGAAGGATGTGGAGAAATTGAAACCTTCGTATGTTGTTAGTGGAAATGTAAAATAGTACAGCTACTTTGAAAAACAATTTGGTACTTTCTCAAAATGTTAAATATGGAGTTATAATTCTGTTCCTAAGCATATACCAAAGATAATGAAAAATATGTGTCCACACAGAAACCTGTGAATGTTCATAACAGAATTATTCATAATAGTCAAATGGTGGAAACACCCCTAATATCCATCAACTGATGAATGGATAAACAAAATGTGCTACTTCTATAGAATGGAATATTACTCAGCCATAAAAAGGAATTAGGGCCAGGCATGGTTGCTCACACCTGTAATCTCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACTTGAGGCCAGGAGTTTGAGACCAGCCTGGCCAACACAGTGAAACTCCATGTCTACTAAAAATACAAAAAAAATTAGCTGGGCATGGTGGTGCATGACTGTAGTCCCAGCTACTTGGGAGGCTAGGCAGGAGAATTGCTTGAACCCGGGAGATGGAGGTTGCAGTGAACCGAGATTGTGCCACAGCTTTCCACCCTGGGCGATGGAGACAGACTCATCTCAACAACAACAACAACAACAACAACGAAAAGGAATCAAGTATTGATACATTCTACAATGTGAATGAACCTTGAAAACATTATTTGAGTGAAAGAAGCCAGATATAAAATGCCACATATTGTATGATTCCATGCACATGAAATGTCTCCAATGGGCAAATCCGTAGAGCCAGAAAGTAGATTAGTGGTTGCCAGGAGCTATGAGGAGGAGAGGACTGCTAATGCATACAGAGTTTCCTTCTGGAATGATGAAAGTGTTCTGAATTAGATAGTAGTGATAGTTGCCCAGCTTTGACAGTAGAGTAAAAACCATTGAATGCTACTGTTTACAGTGGCGGATTTTTATGTGTATTATAACTCAATAAAAAGATGATCTAATCCATGGAAAATGTGTCAATATGGCAGGTACATGGACTGATTTTAGACACTTTTAGGTAACTTGCCACTGCTTTTGTCCCCTCTCTCCTGCTTGCGAGTCTGCCTATTTATATTCTCTCTCTGTCCATCTGTCTCTGTCTTTCATGTCCCTTCATTCAACTGTGGCCTGCCCTTCTTCAACTTCTCTAACAGCCTCTACTGACATTGTATGAGAGCTACTGTGGGGTAGGAATCTTGGAAGTAAGATTGCCCTCTAAGAGCTAAATTTTACATCAACCAGTGGATTAAAGTGGGGATATATGAAATCATCTATAGCTCTGTTCTCAACCAGGGCTCTCCTGATCTCCAAAGATATGGGGAACTTGCCCCAACTTCAGTGGCCTGAGATAGTAAAAAGCCTTTCCCAAGCTTTCTGTGGGCTTTTTTTTTCTTTGTGGTTACCCAACTCTATTCCCACATTTGTGGCTGTTCTCTTTGTTTGTTCCTGTGTCAGAGTCCATGAAAAGATCTATTTGAATAAAACATCCTGTGAACAGTTAACTCTACTAAAGATTTGAGATGTCAAACAGGAGGGATCACACTTTGCACTGCATAGCTTTCTAACATCCTGCTCTCCTGCCACCGCTGCCAAGGCCCACTTACCACTGTATACTTTGTGGAGAGCAGCTCCTGCCAGAATAGGCCATGTGCTATACTGACCCTCTTTAGAATTTTAGCGAATTAAGTTTAGAATGACTCTTGGGTCAGACAAAGATATTAACATGCCTAGCAATTTGTTAATCAAAAGGCAGATGGTTTAACTTAGAGACCGTTGTTTGGTTAGCTTCTGATTGCAGGTAACAAAAGCCAAGCTGAGCTGGTTTAGGCAAAATAAAGGAAATTTGTTACAAGGCTGTAAGGATGTATTGGTCATGACTCTTAAGTAGAACAGTGTTCTGAATCAAGTTACACCACAATCCCCAGATACGGGAGACACAGTATTCTTCTTTTTATCGTAACTGCTGTGAGTTAGATTAGTCATTTGCAACTAAAGAGTCATGATGATACTCTTTGCAACTAAAGATTCATGATAAAATCAGCTTTGTTTGGCTTTATTTTGCGTGCAGAGGTTTGGTATGTGGTAGGCAAGATAGTGCCTGTGGTTGTAAACTCACACTTTAGTTTAGTCACCAAGTTCTCACCTCTACCTGCCTTAATTTAAACCCCAAGAAGACTTTATTTGGTCCTAAAGGCTTTTCTTTCAGTATCTTTCTCTTTCTGGAACCACGTGATTTTCTTGCTTCTGCCTTTCTCTCTACTTGTTTCATTCTTCTCCTCATACTAATAGTAAAAATAATAATAGCTAATATTTGTTGAGAACATATTATGTACCAGGCGCTAGTCTTAAATTCTTTACGTACAGTAGATACTGTTAATGACCCCATTTTGCAATTAAGGAAACAGATTCAGAAGGGTAAAATAATTTTATCTAGATTCATATAGTTAATATATGGTATGTTCAGAAAAAGTTCAGGTAGTCTGACTCCAGAATCCACACTCTTACCCACTCTGCTGTCCTACCTTTGTTATGCCTGTGGCCACCCATCGTTGTTCAAATGCCTTTCCTATTTTGGTGAATTTCCTTCCTTTGATGTCTTACCTCCTTAAGACAGAAGGCAGAATTCACTTTTTCAGCCACCCTTACAGTTAGAGTGCAAGCATGGGACAAAGACTCAGCCAATCAATTTTACATATGCCAGATTTATATTCTGAAGAGAGCAATATAAGGAAACAAACAGCATGTTGAATCAGTTTGTGTGTGTGTGTGTGTGTATAGAAAATGGCAACAACAGAGTACCAATTTCAGAGGCAACAGTGGCGAAGATTCAAGTATTCAAGTAAATGGTATCCAGTGGGGCAAGTTGTAAATGGGGCAAGTTGAGATGCCTACACAAAGCCGGTTGCCATGGGCCCTCACTGGAACCTCATGATGTGGTTTGTATGATGTCTTGCATATATAGCTTATAAGGATGACTATGGCTCTCTAGGAGATTGAGTCCATTACTTAATGCCCCTTAATTAATTCCTTTTCTGCCTAAATTAGTTAGAGTAAGTTTGGCTGTTAGTAATTAAGAACCTTGATCGATTAAAAGGGTAGGACCGTTTTTCCAAGGAGATCTGTTATGAGTTCCACTGTTTCATTTAGGATGCTTTAAATTCATATAACGGAACACCCAACTCAATCATCTTCAAAAATAAGGACATTTTTTAACTTTATAACAGGAACTCCAGGCTTCAGGTTGAGTTGATTAGCAGAATAAAGAGATCATCATTGCCTCAGATTCTCCCATTGTTTCTTCTTTGCAGTAACAGCTTCTTTGCAATAATAACTTCATTCAAGGCTGGTTTATCTTGTGGTCATAGCTGTTTGTCTGTCTTTCTTCCTTGTTCAAACTTAGCTTGAGAGTCTTTTGGATGTCTCTCCCAGAAGAACAAGGAAGAACTTTTCTAAAAGTTGCAAGTAAACCTTTTGTCCTGTTTCTTTGCTTTTTAAAGAAATAATGATTGACAATGGAGATACAAGTGTTCTTAAACCAATTAGGCCCACCCTGGGACTATAGTGAGTTCTCCAAATTATGTTGCTGCTGCTCAGTGGGAAGAGGTTGAGTAGAGTCAGTCATAGTGCCTACAGCCCCAAAAGATGAACACCCACCCACAAAGTTATCCATTTATAAACTGCCACTTTGTTAACTTTGAAAAATACTTTTATAACAAGCTGTTGGGATGGGTATTACTAGGAGATCTCTATTTTAAAGATGAGGATACTGAGATTCCAAAAAGTTAAATGACTTGCCCAAGTTTACACAGTAAGGAAGTGATTAAGCAAGGACTCAAATATATGCCTTCTGATTTCAAGGCTTTGTATTTTTTTTTTCACTTAATCATAGCTGTTCTTAGGATAACAAGAGTAAATTAAGTATTTGAAATAATTTCCAGTTATCATGCCAATATCGGAACTTCTCAGACGAATATCACTTAAACTGTTCCCGTAAGTCTTTAATAATCATTTTTTACAATTTATTAG
Seq C2 exon
AAATAAGAAACTCTGAAGAAGATCAAGTTCTCTATCTGCCTCTTCTACCTAGCAAAGTAGATCTCCAGCAGGTCACCATAATTCCACACGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGGACTAATACATATGCA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000154479:ENST00000447353:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.148 A=NA C2=0.025
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development