Special

ENSG00000154479 @ hg38

Biotype
protein_coding
Gene Symbol
CCDC173
Description
coiled-coil domain containing 173 [Source:HGNC Symbol;Acc:HGNC:25064]
Coordinates
chr2:169645425-169694433:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
5
chr2:169681177-169681181
-
10.64
38.2
0
Alternative 3'ss
57
chr2:169681177-169681233
-
89.02
38.2
0
Alternative 3'ss
116
chr2:169665053-169665168
-
42.06
53.21
0
Alternative 3'ss
156
chr2:169665053-169665208
-
56.6
47.85
0
Alternative 5'ss
0
NA
-
94.28
23.48
0
Alternative 5'ss
341
chr2:169664663-169665003
-
5.72
23.48
0
Exon Skipping
227
chr2:169681007-169681233
-
78.18
65.08
0
Exon Skipping
193
chr2:169650329-169650521
-
96.93
21.86
0
Exon Skipping
205
chr2:169665004-169665208
-
21.13
100
0
Exon Skipping
244
chr2:169664663-169664906
-
2.68
39.29
0
Intron Retention
13027
chr2:169681234-169694260
-
14.44
66.15
0
Intron Retention
5966
chr2:169675041-169681006
-
10.23
78.79
0
Intron Retention
97
chr2:169674770-169674866
-
7.07
66.34
0
Intron Retention
12139
chr2:169662437-169674575
-
12.35
100
0
Intron Retention
2999
chr2:169646183-169649181
-
11.59
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000070883 Ccdc173 1-to-1
Mouse mm9 ENSMUSG00000070883 4930578N16Rik 1-to-1
Rat rn6 ENSRNOG00000052954 Ccdc173 1-to-1
Cow bosTau6 ENSBTAG00000001090 CCDC173 1-to-1
Chicken galGal4 ENSGALG00000009824 CCDC173 1-to-1
Chicken galGal3 ENSGALG00000009824 C2orf77 1-to-1
Zebrafish danRer10 ENSDARG00000077928 ccdc173 1-to-1