HsaINT0035231 @ hg19
Intron Retention
Gene
ENSG00000147432 | CHRNB3
Description
cholinergic receptor, nicotinic, beta 3 (neuronal) [Source:HGNC Symbol;Acc:1963]
Coordinates
chr8:42565533-42585846:+
Coord C1 exon
chr8:42565533-42565577
Coord A exon
chr8:42565578-42585736
Coord C2 exon
chr8:42585737-42585846
Length
20159 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAAT
5' ss Score
8.76
3' ss Seq
AGTGTACTAATTTCATGCAGGAA
3' ss Score
6.07
Exon sequences
Seq C1 exon
GATGAAAAGAATCAGCTGATGACAACCAATGTGTGGCTCAAACAG
Seq A exon
GTAAATTTCAATCCAAGGATTGTGTCTGCTAACCCAGTCACTTATTTTCTATTTATAAAGGCTCCTATCTGAAAAACAATTATTTAAGAGGGCATATTGTGTTCCTCAGGGAGATTTGTGGGAAGGGTCTATGGCTTTTATTTTCTGTTGTGAGTGTTGGGGAGCTGATCCTGGCAAGCCCCTGGGTACACACTGTTGTGCGTGGTTGCTCTCAGCAGTAGAGCTGCTCGTGGAGCAGGCAGAGGTGACTCTACTGCCATAAGGCCTGGGGATGGGCCCTGGGACCACTTAGAGGAAACAACAAAGAGCCTCCAAGATGCACCACTTTCTCCCAGGTAGGGAACTGCAGCTAGGTAGGAAAATCAGGGCTACATCCTCCCTAGCCTTCTCTGGTCCTCTGTGGGTAGAATCTACCTCTAATACCTCTTGTTGCTTCCAAGGAAGAACTGAGCCCTGAATGGAGGAATAACGGGGCTGCCCATTATTAATTTCAGAACAGAGTGAAGCCCAAAACAAAATGATGAATACGTGTTTTCCTGACATCACTGAAAATGCATTTTGAATCGTTTTCAGCTTTCTTCTTAGATAATTGCTTTTAGCTTGGCTAGAGCTTATTTCCTAAAGTCAGGGGAGTGTGCCCAAAGGAGTTTGTTCTAGGATTGTCAGTAAATAATTACCATTCAAATCCCAGTTTCGCATATGTTATCTACAAAGAGAAAATATTGACATTTGATAGCAGGTAAGAAGTTTGGTTTATCCCAGCTATTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGTGGCAGAGGCTGCAGTGAGCCAAGATCATGCCACTGCATTCCAGCCTGGGTGACAGAGCAAGAGCCTGTGTCAAAATAAATAAATAAATAAACTTGGTTTAATTGCTTGTGTTTTTATTTTACCAGTGGTTTTTTTTTTAATTTAGTTTTCTCATATTCATTTACATATTTATCTGAGACACAGTCTCATTCTGCCGCCCAGGCTGGAGTGCAGTGGCATGATCTCTGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTTGTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGTGCCCGCCACCACGCCCAGCTGATTTTTGTACTTTTAGTAGAAACAGGGTTTCACCATGTTGGCCAGGCTGGCCTCAAACTCCTGGCCTCAAGTGATCCGCCCACCCCAGCCTCCCAAAGTGCTGGGATTACAGACTTGAGCCACTGTATGTATTTATTTATTTTTTAGATTCAGGAGTTACATGTGCAGGTTTGTTTCATGGATATATTGTGTGATGCTGGGGTTTGGGCTTCTAGTGAACCCATCACCCAAATAGTGAACATCATACCCAATAGGTAGTTTTTCAACTTATTCCCCTCCCTTCCTCCTTCCCTCCCTTCCCCTTCATCTCTTTTGGAGTCCCCAGTGTGTTTTGTTCCCATCTTTGTGTCCATGGGTACCAGTTGTTTAGCTCCCACTTCTAAGCGAGAACATGTAATATTTGATTTTCTAAAGTTTTTTGTTTGTTTGTTTTTCTTTTTCTTTTTTTTTGAGACCGAATCTCACTCTGTCACCCAGGCTGGAGTGCAATGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATCCTCTTGCCTCAGCCTCCCGAGTAGCAGGGACTACAGGCACATGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAAATTGGTCTTGAACTCCTGGCCTCAGGTGATCTGCTCACCTCGGCCTCCAAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCACCCTAAGTATTTTGTCCAGATATTGCCTAATTTGCCCCATTGTTTTAAAATATTCCTGGTGGGATATCTTTCTGCTAATGCTTTATAAGGAGCAATGGATACAAGAAACAGCAAGGAGCTTCCCCCAGCTTCATTTCATGTCATCAAATGTCTCCCACCCAACAACTTTAGTGAGATTTAGAGAACTATCATGATTTTCAGTGCTTTCTACTTATCTGATTCTCTAATCAGTAGAAACGGTCTGAATATTGTTTTACTTGCAAATAAAAATACCCAAAAGAAAATAATAAGCTTGGAATGTATATATAAAAATACCATTTAAATAAACATATCTTGCTATACACCCATCTCATTCCCCAGTGACTTACCCACTTTTGCAATTCAGAGGCCTGAGAATTGGGAAGTATTTTGAGTTGATAAAGGCCAAGAAGAAATCCTATATTCAAGTTTGCAGGGGAGAAAAGAACCCACACTTTCCTCTTAAGGTGAAAACAGGCTTAGAAGTTAACAAAAAATCAAACAAACACACAAACCTTTACTTCCTGCACACCTCCTTCCCCCACTGCTCTCTTTTTTTTTTTTTTTTTTTTGAGTCTGTGTCTCACTCTGTCGCCCAGGCTAGAGTACAGTGGCTCAATCTCAGCTCGCTGCAGCCTCTGCCTCCTGGGTTCAAGAGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACGTGCCACCATACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAGCATGTTGGCCAGGCTGGTCTCGAACTCCTGATGTCAGCCCAAAGTGCTGGGATTACAGGCATGAGCCACTTTGCCTGGCCGAGATTAAGCTCTAATCTCTCACATAAAGCAGGGGTCCAGGGACTCTGGGCCTTCACATGGGTATAGTAGGTCTTTTCACTTTTCTTGTGCTTTTGAAAATTAGGAGTCGTTTTGGCCAAAGAGAACAGCATTAGACACAAAAGAGTGGGCGCCGAGGACCCTGAGGGCCTCAGCTACAGCTTTGGAAAGGACTTCCCACAAAGTGTGCCACCAGAATCCCAGAAGACTGGTGGGTGTCTTCAAGCCAAGGTGGAATTAAATCCTAAAAGTCAATTCAATACCCAAAACCAAGCAGGAGAAATCCACAGGCATGGAGCACACTGACACTTGGAAAAGTCAGCCCACTGACTGAAGTTCCCATTTAATAGAAGCAATGAGAATAATCGACTTTTTTGGGTATAAATATGTAAGGTACAAGTGCAGTTTTGTTACACAGATACATTTGTAGTGGTGAAGTCTAGGCTTCTAGTGTATCTAAATACTGATGTACATTGTAACCATTAGGTAATTTCTCATCCCTCATCCACCTCCCACCCTCCCACTCTTCCGAGTCTCCAATATCTATTGAGATTAATATACTTTAATTGTGTTTAATTCACAAATGCATAAATGAGGTTTATCTCATTTAAACCTCTCTACCACCTGACTTAGGAAAAGAGACATCATTACCCCTGTTTTATAGAGATAGAAGAGTCCAGTCCTCATCCAGCAGGAATCTGGGTTTCCTAACCCCTGGCCAGGATCTTTCTGGCCATATGCAGCCTCCTTCCTGAACACTAAGCCCTGCTTCTAGATCACAGGAGGAGCCAAAGCAGGAGAAACGAAGCTTCACATTCCAGAAAACTACAGAGGATATAGTCATTGCGACGTCCATTTGCACAGATTGAGTTTGGAGTGGGAAATGTTACAGTGGATATTAGTTAATACGCGCTGTTATGGCACAGACAATGTTGGGGCAGAAAAGAAAGGTCATTTTTATAACAGTGGGTGGCAAGAAGGGAAGGCTGCCTGTAACAGGAGGCATTGAGCTCTGCCATGATGTTATTTTTATGCTTTTTAAAAAGAGCTTTTTGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACAAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATAAAAAATAAAAAAAATTAGCCAGGCGTGGTGGTGGGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGGTTGTACCTGGGAGCCGAGATCGTGTTACTGCACTCCAGCCTGGACGACAGAGCAAGACTCTGTCTCAAAACAAAACAAAACAAAACAAAACAAAACTTTTTAAAGCTATATGGATTAAAGAAAGCTGAATGATTAAAAAAAAAACCATGAAAAGAAAACCAAGATAAAACAGATATTTATAAAAAGCTATCATTGGTTTTACACAGATCTTAGTTCCAGAGCAGCTAATAATAATATTTAAGATTTACTGAGTACTTATTAAGTGCCCAGGCACTATGCTAACTGTGTAACGGGAATAATCCCATTGAATTTTCACAACCATCCTATAAGGGAGGTTCTATTATAATCCTAACTTTGCAGATGAGGAAACAGAACTGGAGAGTGGAAGTGACTTGCCCAGGGTTAAGCACTGTTAGGGAAGTCGACTTATGTAGAGAAATCTTTCACTTGCCTTAGACTGGAGGGAGAGTTTGGAGAGTGTCCTGTTCTCCTGTTAGTCCTGTTGCTGTATAATTTCCTAACCCTGGTCTTCTAAGGCTTTGATTCCTCAGTCTCCGGAACATCTGATGGAGTTGGTCTAGAAAGAATTCAGGAGAGAATGAAGTTAGGATCCACTCCATCTTCCATCCCTTCACCAGGATTTATTGACATCCTATGTGCCAGGCGCCCTGCTAGATCCTGGATGTATAAAGAGCAACACACACCACCGCCTGAAAGAAGAGGACATAGCGTTAGTTACTAAAAAATAATTACCATGATAAATAGCACAAAGAAAGTACATATAAACCACTGTGGAGCTTAAAAAATGACAATGAGACAGGAAGAAAGTCAGGGAAAGCTCCCAGGAGGAGGGGATATTTAATTTGAGTCTTACAGGACTAACAGAAGTTCTACAAGCCAAAAAGGTGGGGAAGTTGTGAACCACCTGAATAGTGAATAGTAGTCCAATAACACCACTATCCAAAAGCTCTCACATTTGAGCAAACCCATTGGTAACTCTTTGCAATCATCTCTGTGTCCCTCAGTCAAAATGAAAACAAAAATGCCCAATTCCCCCTCTTTCCTCATTTGCCTCCCAGACACTGAAAAATGTTCTCTAATTCATATCCACATGGAGAAGAAAATTCTACATACTTGGAACAAAAGCATGTTCCATGGTAGCGCATGCAAATGAGATACTTGTGGGGTTTTTTAAGTCAATTCTCCTGTCTTATCCTGTTTCCATAGCTCTCCTCTGGTATATTTAGACACTCTTCTTCTATCCTCTCAACCAAAGAAAGAACTTTATAAAGCACAAATCTAGTGACATCCAGAGGAAGTCTTCTACATGGTGCTATTTTTATTTTATTGATTTTATTTTGCAAACTAGTTTGTCTTCCTCCTTTGTACTTCCAGACAGTAATCAAAACCCTATAAACTATAAATATATTGTTAACATTGACTCACTGGAACTATGTGAGAAAGTACTTACTGCTCCAGTCCCTCAGATCCTGCTCCATCATATCAAGGTTAGGAAAACGTGGAAAGCACCTTAGAGACAATGAAAATTAAACTGACCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGCGCAGTGGCATGATCTCGGCTCAGTGCAACCTCCGCTTCCTGGGTTCAAGTAATTCTGCTTCAGCCTCCCGAGTAGCTGGGATTAAAGGCGCCGGCCACCATGCCCAGCTAATTTTTGTATTTTTCGTAGAGACGAGGGTTTCATCATGTTGGCCAGGCTGGCCTCGAACTCCTGACTTCAGATTATCCACCCGCCTTGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACTGTGCTGGGCGAAACTGACCTTTTTTGAAATGACACAAGGGTTGGCCGTTTTGCCTAGATGTTACAATAGAAATAATCACTATGACAACAAATGCCAAATTTACTCAATCCGTATTTCCTGAGAGCCTGCTCTGCACTGTGTAAGTGATGCAGGGCAGATGAACCCCAAAACTGGGGCTTAGTCTGGCTTCACCGAGGAAAGAACTCAAGGACAGCGGCAGCAGAGATACTGCTCCCTACAGACCATGGCTACCCACCAGCAGTGCGCCCAGGCTAGGGCTGCAGGCATATTTATACCCACCTTTAATTATATGCAAATTAAGAGGCAGTTTATGCAGAAATGTCTAGGTGGGTGGTAACTTCCAGGTCATTGCCATGGAAAGGGGTGGTAACTTCCGGGTATTGCCATGGCGATGGTAAACTGACATGGTGCCGTGGTGGCCCTGTCTTATGGAAAGCCGCCTCTGCCCGACCCTGTTTAGCTAGTTCTCAATCTGGTCCGGTACCCGAGTCCCCGCCTCCAGAGTCAGTTTCACCTTCTGCCTCATAAGGCCCTGAGCTGGGCGCTGTTGCATATAAAAATAAGGCAATGAGAGGACTAAATGACCCGGCTTCACTGTAGCTGAGACAGTTTGTTCTCCTCTCCCCATGACAATCCTGAGGAAAATAAAACTGCTGGAATATCTGCCCAGGCCAACATCTTAAAGTAGCAGTGTCTTTCCAACAGCTGATGTCTGTTTTAGATCAACAAAAAGTTCAGCAAACATGAAGGTCTTATTGGATAGACCCCTGGAGCTGATTTCCCAGGAAAAATAAGAAGCAGACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCGACCTGTTGTGGAAAGGTCAGGCTAGTACTAGAGGTCTGGGTGATCTCCCCAAAAGTCTACCATCCGCAACCTGGAATGGCACTTACAAGTTCATGAATTCATCTCAGATCTTTACTCATGATCTGATTTTCCTTCCTTTTCTACAACCTTACTCTGACCTTAGCAAAGGAGGCCAAGTTTGGACTTCTTACTCAAGTGGACCCTGGTAAGAATTGCGTAGGGGTCAAAAGGCCTACTGTATAAACTTGGGCAAGTCACTTCACCTCTCTGACCCTCAGTCTCTTCATCTATTAAATAGAGCTGATGCCTAGCTCACAGTGTTGTCTGGGGGGTTACATGAGATAATGTATGTGAATGTGACTAGCTCAATAAATGTCACTTTCTGTTGCCACCTTTGAGCTTTCTCATCCTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGAGTCTCACTCTGTCGCCCAGGCTGGAGTATGGAGTACAGTGGCACAATCTCGGCTCACCACAACCTCCGCCTCCCGGATTCAAGTGATTCTCCCACCTCATCCTCCTGAGTAGCTGTGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAAAGACAGTTTCGCCATGTTGGCTAGGCTGGTCTGGAACTCCTGACCTCATGTGATCGCCTACCTGGGCCTCCAAAAGTGCTAGGATTATAGGGGTGAGCCACCACGCCTGGCCTTCATCCTTAATAACAAATGACATTTCTTGGCCTTAACAACTCATGAATTTAACAGGAATATGAAACATATAATATGTCATGTTGGTGCCTTTAAGATTAATATGAATCAACAAGAATTTGGCTTTAAGAATTTCACATCTAAGATGACTAGAGATCCCAGGGATGTCCCAGAGACTGCAAATCAAGACAACAGCAAAGGATATTTGTTCCTTATTATCTTTTGGTCCTATTAGCATTGAAGTAAGAATAATTTGGGGACTTGGCCGAGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACGAGGTCAGGAGATTGAGACCATCCTAGCTAACACAGTGAAACCCCATTTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTGGCAGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCGCTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAATTCGGGGACTTTTTTTATAGTTTTTTTAAAAAGCCTTACAATTTAGGTTTAAATAAAATTTGGCTCTGGGTTGTGGTTTAGCTAGACATTTATGAGTGATCGTTCAGGTAATACATCTAAGAAAAGACAATTTTAAGGGATTATATATATTTGATATGGATTTGAAATTGCAATTTTCTGAATGAGGAAGCCTAGAGTTGGAGTGTTTTTCCATTTTTTTCTTAGTCATAGATTAACTTTGATATTTGGCTCTGACATATCCTGTGCGATCCTGTTTCCTGCAAAAACACAGCTCTCAAGTCGGGAACTGCTGTGATGTGGAGCTGGTGTTTGACGACGGCTTTGAGCATCTCAGCTAGAACACACTATGCAAACATGGAATATTATTTCTCATCTCTTACCCTAAGAAGGGAGAGACAGGAGCTTAATCCCCAGATGCCACCAGGGTTTCAGAGAGAACAAAGAAGTGACCAGAAAACCTCGCAGCCCCTTAGAGAACGAGATAGAGGTTTGGGCTCTGGCTGCTCAGCTGGGCACTGCTGACTCTGCCACTTGCAAATGTCCTGTGGCTTGTGCCATTCTAAACCCACAGAGGTCCTGGTCTACAGGGCACAGCCAGCTCTGTGGTGAACACACATCCTGGCAGGAATTGGGTGGGCTGGGCATGGTGGCTCCTGCCTGTAATCCCAACACTTTGGGAGGCCAAAGCAGGAGGATCATTTGAGGCTAGGAGTTTGAAACCAGCCCGATCAACATAGGGAGTCCCCTGTCTGTACAAAAAATAAGAAAAATTAGCCAGGCATGGTGGTGCATACCTGTAGTCATAGCTACTAGGGAGGCTGAGGTTGGAAGATGGTTTGAGCCCAGGAGGTTGAAACTGCAATGAGCTATGATCACACCACGGCACTCCAGCCTGGGCGACAGAGTGAGACCCTGTCTAAAAACAACAGAAAAGAAACTGGATGAGCCCTCTGATGGGAATCTCAGGGAGAACGCTCTGTGATTCCCTGTCTGATAGCAGAAGGACACTAAGGTTGTGAAGAATGCTCTCTCACCCTTGCAAAGCAATGCAGCAGCTGGAGATCAGTGACTCGTCCAAGTTGTACAGCTAGTAAAGCACAGTCCTAGTGTGGAGCTCAGGGCTTGTGAGTGGAGTCCAGTGTGCTTTCTCTTTTGAGGCCACCAGTGTTAGCAGTATTGACCACAAGTCCCACCTAGCCTCTTTTTCTTTACTGGTTAGGAGCAACTGAGTCTGCTCTAGATCCCTTTAAAATCCTCCTCAAGGATCTGAAGGCAGCCCGCATTCATGATCTCCTTCCTTCCTGCCCCAGCACCTTTCCACAGGCAGTTCCATCTTTGGCCAGCCTTCCTTCCCCACGCAACCCTGCCCCACTCAGAAGCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCAGGCTGGAGTGCAGCGGCACGATCTCGGCTCCGCCTCCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACCGCGCCCAGCCCTCAGACTGCTTCTTACCCTGCATGTTTAGTCTAAATGTCGTCTCCATGGAAATGCCTTCCCTGTCTACTCCACTGTTCTGTATCCCATACCCAAACTGTCTCCTTTACAGCAACTGTCAGGAGGTGTGGGTATTTGTTAGTTTACTGGTTTATCATCTGAGTCAGCCCCAGGATAAGAGGTTGAGGCAGCTGTGCTCAGTGCTAGTACATGCCTTGCATATTTGATGAATGAATGAACTCTTTGAAAACAGTGAGCCCCATAAACCACTATCTCTGTTTTATCTCTGGTCACAGCTGTTAATCCTGCTGTTGAAGGTCAGGTAAGCAACACAAATCTTTCTGACTTAAAAATACCTCCCCCTGAGGCTTGCCCTAGTTCTCTTAGAACAATTTATAAAGCTGGTATTTGTTTGCTGCAGTTTTGCAATTTGCAACAAGACAGAAGTGCTAGAATTTTAGTCATCCCCCATCCTCCTTTGCAGGATAGAACTGGGTGTAGGTAAAGACCTTCGGTGCCTGTAGAAGGAAGGAAACTGGATCCAAGAAGCAGGTGATTTCATTTCCATCAATCTTTAGGTTCCAGATGGAGGAGCTGTGCATTTGGGCTCATTAGCTGTGCTCACTAAAGATGGACCTGGAGCATGACAGCACAGCCCTAGCTGGTCTGCCCAAGTCTGTGCCTGTCCCCAGTGCTCTTAGCTATGTGCTTGCAGCGTGCTGCAGCTGCATAGCCACCCAGGTTCTTCCCAGGATCAGCTGAGAACATTTTAGTTGCAAGTGACAGAAAACCTCACATAAACTAACACTAGCAAAAAGAGAACTTATTAGCTTTCACAATCGGAAAAGTCCAGGGACAGGGCTGGCTTTACCTGCAGCTTCATGCTGGGCCCCTGCTATATTCCCAGGACCTGGTTCCTCTCTGGGAGTCTCTGGGCTTCCTGTCCTCTGTGTTGATTCCATTCTCATCCATACCCTCCCCCGGAAGCAGGATGTCTACATCAACTCCAGACTCAAAATGCTTCCTATAAGCCAGGCGCAGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGACTGAGGCAGGTGGATCACTTGACCTCAGGAGCTGCAGACCAGCCTGGGCAATGTGGCAAAACTCTGTCTCTACAAAAAATACAATAATTAGCTGGGCATGGTGGTGCACTCCTGTAGTCCCAGATACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCTGGGAGGCAGAGATGCAGTGAGCCGAGATCACACTACTGCACCCCAGCCTGGACAAAAGAGCGAGACTCTGTCTCAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACATTTCCTGTGTGCAAGTTCATCAGGGTAAGAGTGTCCCACCTCTTTTCCAGTGGTCTCAGAAGCCCTGTGGTGTCTTGCCAACTCTGATTTGGTTGCCTGTTGTCCCTGAAAATCACAGTGGGCAGGTCTGAGAGGCAGGCCTGGAGCAGAAGGATGCATCAGCTCCCCCAAAAGCTGATGGACTGAGAGTGGAGTGAGGTTGTTCCACAAAAGGAAACTGGGGTTCTGTTACCAAGAGAAAGGCAGGTGAATTCAAGGCAACAGACATAGCACGTGTCCTTTTTATCTCCTAATCTGATTTCCTCCTCTTTACATAAAGATCTCTTGGTGGCCAGGCGTGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAAGCCGAGGCGGGTGGATCACTTGAGGTCAGGAATTCGAGACCAGCCTGACCGACATGGCAAAACCCCATCTGTACTAAAAATACAAAAATTAGCCAGGCTTGGTGGCACATCCCATCTACCGGAGAGGCTGGGGCAGGAGAATGGCTTGAACCCAGGAAGCGGAGGTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATTAAAAAGAAAAAAAAGAAAAGAAAAAAAAAAGATCTCTTGGTGTGCCCCTCCTTCCCGTGGCCTTGCCGAAGCAGAGGATGACCAAAGGCCTGTGTCCCTGTGGCGCATTCCTCATCTCATAATTCTCCCATTGTTCATCACGGCACTTGGACACAGTACAGTATGATTTTTTGTATAATTCCCCCGACTTTTATTCATGTATTTACTTATTTATTTTGAAACAGGGCCTTGCTCTGTCTCCAAGGCTGGAATGCAGTGGTGCAATCACAGGTGCCTGCAGCCTTGAACACCCAGGCTCAAGTGATCCTCCCACTTCAGCCTCCAAAGTAGTTGGGACCACAGACACACAACTACACCCAGCTAATTTTTGTTGTTGTTTAATTTTTGAAGAGATGGGGTTTCCCTGTGTTGCCCAGGCTGGTCTCAAACTCTTGGGCTGAAGCGACCCACCTGCCTCAGCCTTCCAGAGTGCAGGGGGTTACAGATGTGAGCCACCTTGCCCAGCTCCCTCTTGGGGGAGGGATGGCTTTAACAGATATTTTACTGTTACTTATATATTTTACTATTTAGATATTTACTCATTTATTTTACTGTTTAGATATTTACTAACATATTGTAAGTAATAGGATATCCTATTACTTAGATATTTACTAAAATATCGTAATAAGATATCCTATTACTTAGATATTTACTAAAATATCGTAATAGGATATCCTATTACTTAGATATTTACTAAAATATCGAATAGGATATCCTATTACTTAGATATTTACTAAAATATCGTAAGTAATAGGATACCTATTACCTAGATATTTACTAAAATATAGCAATAAGATATCGTATTACTTAGATATTTTACTATTGCTTATATTTTATTATTACTTTTAACAGATATTTCACTGTATTTTACTGTTTGCCTTTTAACAGGTGTTTTGCTATTAAGGCCAAACAGTTTTTCTGTTCTATCATTGTTTTTTTTGTTTTCTCTCTTTGATGGAGAGGAGATGAAATGAGCTGCTGTTTAGCCTGAGTACACCATTGTGCTTTATATCTATCAGCACCAGAAATACCCCTGAGAGCTGAACCGTAGAAAGCTTTCTAGAAACAAATGAACTTATGAAGCATTTTAAGCTACAGGTTTTCCCACTGCAGTGCATCATGGGGAGAGGTAAAAGCGTGGAGGATCTGGCTTCAGGCAGACCTTAGCTTAAAGCCCATTAAGGCCACCAGGCTGCACATCTCCTGGGGGCCCCCTTCACAGCAGACTCAGTGTGCAGGGCACCTCTGGAGTAGTGGCTGCATGGATGACCCAGCCATGTGCAGCAGCCTTGAATCCCGTTTCCCTCACTGACTAGCTGTGTGGCCTTGGACAGGTATTTGAACTCTCTAAGCGCTGGTTGCCTCATCTAATACAGCATTAATAAATATTTATTATATTTTAGTCCGGTTGTGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTAAGGCAGGTGGATTACCTGAAGTCAGGAGTTCAAGACCAGCCTGGCCAAAACGGTGAAACCCCGTCTCTATTAAAAATACAAAAATTAGCTGGGCGTGATGGTGGATGCCTGTAATACCAGCTACTAAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAGGCAGAGGTTGCAGTGAGCCAAGATTGCGCCACTGTACTCCAGCCTGGGCAACAAGAGCGAAACTCCATCTCAAAAAAAAAGAAAAAGAAAAGAAACCTAGGCTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACATTGGGAGGCTGAGGCGGGCAGATCACCTGGTCAGGAGTTCGAGACCAGCCTGACCAACATGACAAAACCCCAAACAAACCTCAGGAAACTAGTAATAGAAGGAATCCTCCTTAATCTAATAAAGGATATTTACAAAAACCCCCAACACCTAACATAAACACTTAATGGTGAACAACTAAATGCTTTCCCCCAAAGTTCAAGAACAAGGCAAGGATATCCTACTTAACATAATACTACTCAGTAATTTTTTTTTTGGAACATAGACTCACAGCAGAGACAAGTGAACATTTATTTTTGTGCCTTTCTTCCTATGTGTATTTCAAGTCTTTTTCAAACAAAGGCCCCAGGAATCTCCAGATTCAATTATGTCCCTGGGGTTGGTCGACTGCTACAGGAGTCTTAGGGAGCCTTGGACAAATGCTAGAGTTACTCATTTACCACCATTAAACTCTAGGATAGAAGATGCAGCAAAGCAGGACTCCTTCCTCCATGGAATGTGCTGATTTCAGACGAGGCGGCAGCCAATGTAGAAAACGCTGGAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGTACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGGTCGAGACCATCCTGGCCAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAAAATTAGCTGGGCATGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGACTGAGGTGGGAGAACTGGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGACTGTGCCACTGCACTTCCAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAACAAAAAAAGAAAACACTGGAATTTTTTCCTTGGAACTGGACTGTGATGAGAGGTGCTTGCCATGAACATAAGCTACTGTCTTTTCTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTGAGACAGAGTTTTGCTCTTATTGCCCAGGCTGGAGTGCAATGGCGCAATCTTGGCTCACCGCAACCTCCACCTCCAGGGTTCTAGCAATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAAGCATGTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCAGCTACTGTCTTTTCTTTGACCCTTCCTTTCCATTTTTTGAAGATAAAGCAGGAAATAATCTTCTCTGAAGATACTTGATAAAAATTCCCCAAAATACAAAAACACATGCTTCCACTTCATTGATAAAAATTTACTGCAGTTTGGCACCTGGGTCTAGTTCAGCTGGCAGATGAGCTGATTGATGCATTCACCCTGATAGCCAGGTATGCCCATCTCCTTGAGGAAGCCCACTCTATTTTTGGTAGCATGACGGGCCACTGAGAGGTGGAAAGGGCACAAGAACCACGAGATCTCCTGGAAATGCTTCTCCAGGTGCTCCTCAATCACTGTGTTGTCTGTCAGAGGGATGGTCTTATTCGTGACCTTGACTTGTCCACGTTTCAAAATGAGTTCCCAGACAGACTTCAGATTTGGAAATCCCTAGGTCACATAAGTTTCCACTATACGCAGCATTTTTAGGTTCTGGGGGGTGACTTTTACAAAGACACCACTAAAAATTTTCTTTGGGCAAAGTCTCGCAATGGTTCTCTGCACCAGTAAACTCACGCCATCAATCCTTTCGATGCGTACAACAAAGGCCAAGGAATGTTTATCTGGCAATTCCAAGGTGTGGTTTCACTTCTAGTCGTCTGAGACGTACCTTGTCACGTTTCTGTCACCAGGAATCTTGTAGGAATGATTCCAGTTGTTTAAACCTGAGCCCTTTTCTTTTTCTCTGCTCCTTCTTTGCCAAAAGTGCCTGCTTTGCCTGGGTGGCTTTGAGGGCTTGATAAGCTGTCCTCATTTTCAGGAGATTTTCTGGAACCAAAGGGATTTATCTTTGCTCTTGCTCTGCCATCTTTCTAGTGTTGCAGCTACTACTACTCAGTAATTAAGGCAAGGAAAAGCAGTCAAAGTTATTCAGATTGGAAAGGAAGAAATAAAACGCTCCACTTGCAAATGACATAATTGTCTATGTAGAAAATCTACAGAAAAGATCCCAAAATTAAGTGAGGTAAGCCAGGTCACAGGACATACGGTCAAAATGCAAAAGTAGATTGTATATTTAGATACTAACAATGAACGACTGGAATTTTAAAAATTAAATGACTTTTTTTTTTTTTTTTTGAGATACAGTCTAGCTCTGTCATCCAGAGCCAAGCTCTGTCATCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCCGCCCCCAAGTTCAAGCGGTTCTCCTACCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCATCATGCCCGGCTAATTTTTGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGATCATGAACTCCTGACTTCAGGTGATCCACCCGCCTTGGCCTGCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCCCCTGGCCTATTTAGGTATAAATCTAACTAAATATGTGCAATGCCTGTAAGCCTAAAACTGCAAAACACTAACAAAACAACAACAACAAAAAATCAAGACCTAAGTAAATGGAGACATAAATAATATTCCTGGGCCAGGAGAATCTATATTATGATGCCAGTTCTCACCAAACTAATCTGTATATTCAAATCAATCACAATTAAAATCTTGGCAGGATATCTTATAGATAGCCACAAGCAGATTCAAAAATTTGCCTAAAGCTATAATAACCAAGACAGTGTGATATTGTCAAAAAGACAGATGCACAGGGCCGGGCGCCGTGGCTCACACCTGTAGTCCCAGCATTTTGGGAGGCCAAGGTGGCTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATAGTGAAACCCTGTCTCTACTAAAAACACAAAAATTAGCCGGGCGTGGTGGCACATGCCTATAATCCCAGCTACTTGGGAGGCTGAAGCATGAGAATTACTTGAACCTGGGAGGTGGAAGTTGCAGTGAGACGAGATCCCACCACTGCACTCCAGCCTGGGCGATAGAGTGAGACTCTGTCTCGAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAGACAGATACACAGATCAGTGAAACAGAACAGTCCAGAATGGACCCATGCACATACACAGTTAACTACATTTTGACAAATGTACAAAGGAAGTTCCGTGGATAATGTTTAGTCTTCTCCACAAAAGGTGCTGACAATTGGACACTCACATGCAAAAGAAAATGAACTTCAACCCATTCCTGCACCTTTATAAAAGATTAATGGAAAATGGATCTTAGACTTAAGTCGAGGCTGGTGGGCCACGAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATCAGCTGGGCATGGTGGTGTGCACCTGTAGTCTCAGCTACTCGGGAGCCTGAGCCAGGGGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGACTGTGCGACTGCACTCCAGCCTGGCGACAGAGCAAGACTCTGTCTCAAAAAACAAACAAACAAAAAACTACAAAATTTCTAGCAGAAAGCATACGAGAAAATCTTCGTGACCCTGTGTTAAGCAAAGATTTCTTAGATATGACACAATCCATAAACAATAAAACTGATAAAATGAACTTTTAGAATTTCTGACTTGTGAAAGACATTAGTAAAAGGAAAAAAAGACTGAGAGAAGATGTTTGTAAATCAAATATTTGACAAACCACTTTTATTCAGAATGTATAAAGAACTCTAAAAACTCAGTAAGAAAACAAACAACTTGATTAAACATTATGCACTTCACCAGATAAGATACATGGATGGCAGATAAACACATGAAGATATTCATGATTAGTCATTAGGAAAATGCATATTAAAAAGCACAATGAATCTGGGCTCAATGGCTCATACCTGTAATTCCTACACTTTGGGAGGTGAGGCAGGAGAATTGCTTGAGCCTAGGGGTTCAAGACCAGTCTGGGCAACATAGGCAGACTTCATTTCTACAAAGCAAAACAATTAGCCGGGTGTGGTGGTATACACCTGTGGTCCCAGCTACTTGGGAGCCTGAGGCAGGAGCAGAAGGATCACTTGAGCCCAGGAGGTTGAGGCTGTAGTGAATCATGATGTCACCATAGCACTCCAGCCTGGGAAAAAGAACAAGATCCTGTCTCAAATTAAAAAAACAAAACAAAACAAAAAACAAACATGAAGAATCTAAATGCATTGCTAAGTAAAGAAGTCAGAATTGAAATGTTATGTTGATTCCATTTACATGACATTCTAGAAAAGCTGAAATTATAGAAACAGAACAAATCAGGGATTTCCAAGGGCTGGAAATGCAGGAGGGGTTGATTACAAAAGGGCAGCACCTGGGAAATATTTTGGGCAAAAAAACTGTTTTGGCATCTTAATGCCTGCAGTTATTATACAGCTATTTGCATTAATAACTGTAAACCAAAGAGTGAATTTTATTGTAAGTAAATTTTTACGAAGTGCATAAAGTGGAATTGAAACAAACCACAAATGCTACTGTAAGTGAGTTCCCTCCAAGATCTCTGAGACTCAGACCTACCAATGATAGTAAGAGTCTCCTTAGCAGGAGACAAATTATTCCTAGGAAGGAGATTATATTTGTTCTTCGAAATTGGAAGAGGAGGAAGAAAAAAAGAGAAGCCCATGAGCACCAAGTAAACATGGTGAATACTTTATTATTGGGCTCTTAAATTGTCAGTTTCATATGCGTGATTTCCCATAAATATCATGCCATTGGCCGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCATGAGGTCAGGAGATCGAGAGCATCCTGGCTAACACGGTGAAACCCCGTCTCCACTAAAAAATACAAAAAAAATTAGCCGGGCGTGGTGGCGGGAACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAACATAAATAAATAAATAAATATCATGCCATTTTGTTATACTTCAGATTCTAGCTTTTTAAAGGCCCATACATCTTAAACTTTGTTTTTTGGGGATCAAGTCTCAAAAATGTTGTCTAAGATAGACAATGTTTCCTCTGGGGTGTGGAGTTCCATCATTTGTCAGGCATCATGCATATTTCAGTATTTTACCATCTAGTGACATCATCCATCTGCTGACTCCTGATGTTTTAATGACAAAGTTGGCATCACTGGGCTCCGGGAAGCGTCATGCTGGGCATGCCCTTCTAACTCTCTGAACTCCCGCATCCTTACTCACCTATCCACACGAGGGGCTGTAGAATAGAAAATTTTAATTTTCAGGTCAGATTTCCTATGATTCTGGACCCTAAAATCTTTGTAATAGAGTCCACTCTGCTGTGATTGGGTCATCCATACATCATCCTCTTGACCTTCACAGTCTGATCAATTCATGGTCAGGTTTATTTATCTGGATTCATCAGCCCCTGTAAAACATGCCATGTGATTTCATCCTTATGAAGAAAAATGTGTAAGCGCCTGGAGGCTAACGATATTAGGAATGCAATTTAAAATTATAATTGGGAGCTCCAAAAATAAATTCAGATTAAAACTTAAAAGAAAATGCTGGGAAAACATTTTTTTATTGGATACAAGTTCTAATGTGATCAAGAAGAATTCATGGAAAATGGATGTCTCATATTAACATAGCAGGTGGATGTTCATCTAAGCCTCTTGAGTGGTGTTTAAAATCACTTGTACCAGTTAGCATGTGATTTAAGTATCACTGGACCCACCCTCCTAGAATAAACTGAATTAGACACATCATTGCTTTTCTTTTGTTTGTTTGTTAAGAGAAAATAGGATGAAAAGATAGATCATGAATTAGTGGCGTTTGTTGTAGAGCCTCTTCATGGTGAGGCAGATACAGTAATTTTGGAAATATGTAACATGCAAAGTGTGTGGGCCTGGGTGAGATCAGAGGCCAGGCTGGCTCAAGGTGAATCCTGTACTGAGTCCCCAGTAGGGTCACGCAGTCCAACCGGGACAATTTCCTTTTCTTAATAAAACAGTGGCTTGGTAAAGCTAACAGAAACTTGAAGATTTCAAGATCTAATACATTGAACTTTCGGAATAAAATCACAGTGTACTAATTTCATGCAG
Seq C2 exon
GAATGGACAGACCACAAGTTACGCTGGAATCCTGATGATTATGGTGGGATCCATTCCATTAAAGTTCCATCAGAATCTCTGTGGCTTCCTGACATAGTTCTCTTTGAAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000147432-CHRNB3:NM_000749:3
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0293118=Neur_chan_LBD=FE(6.8=100)
A:
NO
C2:
PF0293118=Neur_chan_LBD=FE(17.6=100)
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)