HsaINT0044252 @ hg38
Intron Retention
Gene
ENSG00000108242 | CYP2C18
Description
cytochrome P450 family 2 subfamily C member 18 [Source:HGNC Symbol;Acc:HGNC:2620]
Coordinates
chr10:94694917-94706960:+
Coord C1 exon
chr10:94694917-94695077
Coord A exon
chr10:94695078-94706783
Coord C2 exon
chr10:94706784-94706960
Length
11706 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGA
5' ss Score
9.22
3' ss Seq
AATTTTTAAAAATCTTTAAGGTC
3' ss Score
6.07
Exon sequences
Seq C1 exon
CCTCACCCTGTGATCCCACTTTCATCCTGGGCTGTGCTCCCTGCAATGTGATCTGCTCTGTTATTTTCCATGATCGATTTGATTATAAAGATCAGAGGTTTCTTAACTTGATGGAAAAATTCAATGAAAACCTCAGGATTCTGAGCTCTCCATGGATCCAG
Seq A exon
GTGAGATCAAGAGCTTCTCTTCCTGAGATATTATTTTTGTTATTTTATCAGACAGTCCAATTTTTTTAATTTTTTAAAATTATACTTTAAGTTCTGGGATATGTGTGCAGAATGGGCAGGTTTGTCACATGGGTATACATGTGCCATGGTGGTTTGCTGCACCCATTAACCCGTCATCTATATTAGGTATTTCTCCTAATGCTATCCCTCCCTTTACCCCCAATCACCCAACAGGCCCTGGTGTGTGATGTTCCCCTCCCTGTGCCCATGTGTTCTCATTGTTCACCTCCCACTTAAGAGTGAAAACATGCAGTGTTTGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCGGCCAAGGACATGAACTCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCCCCTTCACTTATGAAGCTTAGTTTGGCTGGATGTGAAATGCTGGGTTGAGGCAGAAGACAGATGATTTCTGCATTTCCAACTGAGGTACTGGGTTCATCTCACTAGGCAGTGTCAAACAGTGGGTACAGGACAGTGGGTGCAGCACAATGAGCATGAGCCAAAGCAGGGTGAGGCATTGCCTCACCCGGGAAGCACAAGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGATGGCACCTGGAAAATCGGGTCACTCCCACCCTAATATGGTGCTTTTCCAATGATCTTAGCAAATGGCACACCAGGAGATTATATCCTTTGCATAGCTCAGAGGGTCCTACACCCATGAAACCTCACTCATTGATAGCACAGCAGTCTGAGATCAAACTGCAAGATGGCAATGAGGCTGGGGGAGGGGGGCCTGCCATTACTGAGGCTTGAGTAGGTAAACAAAGTGGCCGGGAAGCTGGAACTGGGTGGAGCCCACCGCAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGCAGGGCATAGCCAAACAAAAGGCAGCAGAAAACTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACACAGCTGGAGATCTGAGAACGGACAGACTGCGTCTTAAGTGGGTCCCTGACCCCCCAGTAGCCTAACTGGGAGGCACACCCCAGTAGGGGCAGACTGACACCTCACATGGCTGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGTAGCAACATTTGCTGTTCACCAATATCTGCTATTCTGCAACCTCTGCTGCTGATACCTGGGCAAACAGGTCTGGAGTGGATCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGTCTTGACTGTTAGAAGGAAAACTAACAAATAGAAAGGACATCCACACCAAAACCCCATCTGTACGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCCGAAAAACTGGAAACTCTAAAAATCAGAGTGCCTCTCCTCCCCCAAAGGAATGCAGCTCCTCACCAGCAACAGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTGAGAGAAGAAGACTTCAGACGATCAAACTACTCCAAGCTAAAGCAGGAAGTTCAAACCCATGGCAAAGAAGTTAAAAACCTTGAAAAAAAATTAGATGAATGGCTAACTAGAATAACCAATGCAGAAAAGTCCTTAAAGGACCTGATGGAGCTGAAAACCACGGCCCGAGAATTATGTGATGAATGCACAAGCCTCAGTAGCCGATTTGATCAACTGGAAGAAAGGGTATCAGTGGTGGAAGATCAAATTAATGAAATGAAGTGAGAAGAGAAGTTTAGCAAAAAAAGAATAAGAAGAAATGAACAAAGCCTCCAAGAAATATAGGACTATGTGAAAAGACCAAATCTATGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCACGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAATATTCAAATTCAGGAAATACAGAGAATGCCACAAAGATACTCCTCGGGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCGAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGCTTGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCTGATCTCTCAGCAGAAACTCTACAAGCTAGAAGAGAATGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCATTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCACGCCTGCCCTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAAACAGTACCAGCCACTGCAAAAACATACCAAATTGTAAAGACCATCGAGGCTGGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAACTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGTTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGATCCATCAGTGTGCTGTATTCAGGAGAACAATCTCATGTACAGAGACATACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAGGAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAACAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACGATCCTAAATATATATGCACCCAATACAGGAGCATCCAGATTCATAAAGCAAGTCCTTAGAGACCTACGAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAAGGAGACAGAAGGTTAACAAGGATATCCAGGAACTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTGCAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACTTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAGAGAACAGAAATTATAACAAACTGTCTCTCAGACCATGGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCCCTCAACTACATGGAAACTGAACAAACTGCTCCTGAATGACTACTGGTACATAATGAAATGAAGGCAGAAATAAAAATGTTCTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGACATATTCAAAGCAGTGTGTAGAGGGAAATGTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAAATGACATGCTAACATCACAATTTAAAAAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAGAGATGCAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTTAAAAGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAGAAAAGAGAAGAATCAGTTAGATGCAATAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAACACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATACACTAGAAAATCTAGAAGAAAAGAATAAATTCCTCGACACATACACCCTCCCAAAAATAAACCAGGAAGAAGTTGAATCCCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAATAGTTAATAACTTACCAACCAAAAAAAGTTCAGGACCAGATGGACTCACAGCTGAATTCTATCATAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAATGCATTTGGTGAGGCCAGCATCATACTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAACTTTAGACCAATATCCCTGATGAACATCGATGCAAAAATCCTCAACAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACTATGATGAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACACAAATCAATAAACGTAATCCAGCATATAAATAGAACCAAAGACAAAAACCACATGATTACCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTTTCAATAAATTAGGTATTGATGGGATGTATCTGAAAATAATAAGAGCTATCTATGACAAACCCAAAGCTGATCATACCGAATGGGCACAAACTGGAAGCATTCCCTTTGAAAACAGGCACAAGACAGGGATGCCCTCTCTCATCACTCCTATTCAACTAGTGTTGGAGGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAAAATATTCAATTAGTAAAGGAGGAAGTAAAATTTTCCCTGTTTGCAGATGACATGATTGTATATTTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGACAAGCAACTTCAGCAAGGTCTCAGGATACAAAATAAATGTGCAAAATTCACAAGCATTCTTATACACCAATAACAGAGAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCAAAATTGCTTCAAAGAGAATAAAACACCTAGGAATCCAACTTCCAAGGGATGTGAAGGACCTCTTCAAGGAGAACCAGAAACCACTCCTCAATGAAATAAAAGAGGACACAAACAAATGGAGGAACATTTCTTGCTCATGGGTAGGAAGAATCAATATCATGAAGACGGCCATACTGCCCAAGGTAATTTATAGATTCAATGTCATTTCCATCAATCTACCAATGACTTTCTGCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCGAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAAGCAAAACAGCATGGTACTGCTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAGAGGATTCCCTATTTAATAAATGGTGCTGGTAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATGCCTTCCTTACACCTTATAGAACAATTCAAGATGGATTCAATACTTAAATGTTAGACCTAAAACCATAAAAACCGTAGAAGAAAACCTAGGCAATACCATTCAGGACAGAGGCATGGGCAAGGACTTCATGTCTGGAATACCAAAAGCAATGGCAACAAAAGCCAAATTTGACAAATGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAACAAACCACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACTCATCTGACAAAAGGCTAATATCCAGAATCTACAATGAACTCAAACTAATTTACAAGAAAAAAAGAACCCCATCAAAAAGTGGGCAAAGGTTATGAACAGACACTTCTCAAAAGAAGACAGTTATGCAGCCAAAGGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAACCACAATGAGATACCATCTCACACCAATTAGAATGGTGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATATGGAGAAATAGGTACAGTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGATGATTCCTCAGTGATCTAGAAATAGAAGTACCATTTGACCCAGCCTTCCCATTACTGGGTATATACCCAAAGGATTATAAAACATGCTACTATAAAGACACATGCACACATATGTTTATTGTGGCATTATTCACAATAGCAAAGACTTGGAACCACACCAAATATCCAACAATGATAGATTGGATTAAGAAAATATGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAAGGACATGGATGAAGCTGGAAACCATAATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACTGCATGTTCTCACTTATAGGTGGGAATTGAACAGTGAGAACACACGGACACGGGAAGGGGAACATCACACACTGGGGCCTGTTGTGGGGCGGGGAAAGGGGGAGGGATAGCATTAGGAGATACACCTAATGTTAAATGAAGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAATAATTAAAAAAAGAAATTCCTCTCCACCTCTACCACACAGTCTCAGAGTGTACACAGTTGTTCCCAGTTTCCCATGATTGGGAAGGACTCAAACACTATGATGGCAGGTCAACTTTCTGTCATCTTGTCCAAGGGAAAAGCACACTAAGCTGGGAGTGAATGAGCCTGACCTAAACAGCAGCAGAGAGAATGAGGTGGAGAGGAGAAGGAAGAGGATAGTTAGGAGAAGTCTGAAGCCTATAGCTTAGAGAGTGTCTTCCTCATGAAAAATTGCACTCACTGGGCAGTGGCATTACAGAAACAGGCTTAATTTGGATTAATCTTTCTGTAAATCTGTATTGAGAATTGTTTCATAAAACAATGTCACTGGTAAAAAAAAAATAAAAAAGAAATTCTTGGTTGAAAATTCTTTTCTTTAAAAATGTTGAATAGTGGCCCCCACTCTCTTCTGGCTTGTCTGGTGTCTGCACAGAGATCTGCTGTTAGTCTAATGGGCTTCCCTTTGTGGGCAACCTAACCTTTCTCTCTGGCTGCCCTCAATATTTTTTCCGTCATTTCAACCTTGGTGCATATGATGATTGTGTGTCTTGGGGTTGCTATTCTCGAGGAGTATCTTTGTGATGTTCCTGTATTTCCTGAATTTGAATGTTGGCCTGTCTTGCTAGGTTGGGGAAGTTCTCCTGGATAGTATCCTGAAGCGTGTTTTCCAACTTGGTTCCATTCTCCCCGTCACTTTCAGATACACCAATCAAACATATGTTTGGTCTTTTCACTTAGTCCCATATTTCCTGGAGGCTTTGTTCGCTCCTTTTCATTCTTTTTTCTCTAATCTTGTATTCTCACTTTATTTCATTAAGTTGATCTTCAATGTCTGTTATCCTTTCTTCTGCTTGATCAATTTGGCTATTGATAGTTGTGTATGCTTCATGAAGTTCTTGTGCTTTGTTTTTCAACTCCATCAGGTCATTTATGTTCTTCTTGAAACTGGTTATTCTAGTTAGCAATTCCTCTTTTTATCAAGGTTCTTAGTTCCCTTGCATTGAGTTAGAACATACTCCTTGAGCTTGGAGGAGTTTGTTATTACACATCTTCTGAAGCCTACTTCTGTCAGTTTGTCAAACTCATTCTCCATCCAGTTTTGTTCCCTTGCTGTTGAGGAGTTGTGATCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTTAGTCTTTTTGTGCTGGTTTTTCCTCATCTTCATGGATTTATCTACCTTTGGTCTTTGCTGTTGGTGACCTTCGGATGGAGTTTTTGCATGGTCGTCCATTTTGTTGATTTTGATGTTATTGCTTTCTGTTTGTTAGTTTTCCTCCTAACAGTCAGGCCCCTCTTCTGCAGGTCTGCTGGAGTTTGCTGGGGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCAGCAGCGGCTGCAGAACAGCAAAGATTGCTGCCTGCTCCTTCCTCTGGAAGCTTCATCCTGGTGGGGCACCAGCCAGATGCCACCCAGAGTTCTCCTGTATGACATATCTGTCAAACCGTGCTGGGAGGTGTCTCCCTCTCAGGAGGCTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGTCCCTTAGCAGAGCTTGAGGGCTAGGCTGGGAGATCTGCTGCTCTCTTCAGGGCCATCAGGCAGAAACGTTTAAGTCTGCTGAAGCTGGGCCCACAGCCACCCCTTCCTCCAGGTGCTCTGTCCTAGGAAGAGGTGGTTTTATCTATAGTCCCCTACTGGGGCTGCTGCCTTTATTTCACAGATGCCATGCCCAGAGAGGAGGAGTCTAGAGAGACAGTCTGGCTACAGGGGCTTTGTGGTGCTGCGGTGGGCACTGCCCAGACTCATCTTCCCAGAGGTTTTGTTTACACTGTGAGGGGAAAACCGCCTACTCACACCTCAGTAATGGTGGACTCCCCTCCCTCCCATCAAGCTTGAGCATCCGAGGTCGACTTCAGACTGCTGTGCTGGCAGTGAGAATTTCAAGCTAGTGGATCTTAGCTTGCTGGGCCCCATGAGGGTGGGATCCTGTGAGCTAGACCACTTGGCTCCCTGGCTTCAGCCCCCTTTCCAGGGGAGTGAATGGTTCTGTCTCACTGGAATTCAGGTGCCACTGGGGTATGAAAAAAAGACTTTTGTAGCTAGCTTGGTGTCTGGCCAAGTGGCCACCCAGTTTTGTGCTTGAAACCCAGGGCCCTTGTGGTGTAGGCATCTGAAGGAATCTCCTAGTTTGTGGGTTGCGACAGGTTGCGAAGACCGTGGGAAAATTGTAGTATCTGGGCTGGATAGCACTGTCCCTCATGGCTTCCCTTGGCTAGGGGAGGGAGTTCCCCAACCCGTTGTGCTTCCTGGGTGAGCCAATTCCCTACCCTGCTTCTGTTTGCCATCCGTGGGCTGCACCCACTGTCTAACTAGTCCCAGTGAGATGAACCGGGCACCTCAGTTGGAAATGCAGAAATCACGGGCCTTCTGCATTGGTCTCGTTGGGAACCACAGACTGGAGCTGTTCTTATTTGGCCATCTTGCCCCAATCCCAGTCCAGAACTTTGTATGTACCAAGCTGTGAAGTGAATGTTTGAAAACTGGAAATTTTGGATACTCTTATATAGTAGCTCTGGAAATCAGAGTCTTTCCTCTCTTTAGGGTGTTTTGTTGCCTGCTATAGTTTTTATTTTTTTTCTTCTGAAGGCTATAGCTTCCTTTAGTGACTTTTCAAAACTATTTTTGCAAGTCATGTGTGGTTTCTGAAGTCTTTTCTTTAGCGTATGTTCAGCTAATTTTGACAGAAATTTTCTTGAATGTGGAGAGGCAAAAAAGAGACATAGAAAAAATATATGTATTTATATATATAAATAGCAGAAGAAAGATGGAAGGAAGTAAGGAAAGGAAGGAAGGAGGAAAGGAATGAAGGAAGAAAGGAAGGAAGGAAGGTCTTTCAGATTGGCTGGAGCACTCCTTGTCATAGCCTTCACTTACTGCTTAAGTTGAGCCTGGATATCAGCCAGAGGTGAAAGTTCAGGATCTTCTCACATTTTTCTAACTAGCCTGTCCCGCTCTGGGCATGTTGATAACTTTCTAAATTTCTTAGTATACATAGGCACTTTTGAACATCCCATTTTCCAAAGAAACTGTCTCCCAGCTTTTATTCTCAGGATTTTAGTGCTCTACTGTGTGCCTTAACTATAATCGTTTGCCCTAGGTAGCTTTGGGTTGTTCATTTGTCTTAGGAGATTTTTGAGAAATGTCCATTGCTTTTCCATCCTGAGTGAGTTTTGAATCAGGTGAAACAAAGATGACTGCCTCGTGTTAGCCCGTGTTAGTCCTCAGACAGGTGAGAAAGAGAAACATAATTTTTTGCAAGTAAGGTCTTCTGTGGTCCCTCTGTAAATAGGAACCAGGGCCTTCCACTGCGAGCAGGGCTGCCCTTGACAAGATCACTGCCAAGCTGATGAGGGAGGTGGTACAAGTGCAAATAAACATACCACAAAGCTTACATATGCATCATGGAATACTATGTAGCCATAAAAAGGAATGAGATTATGTCCTTTGCAGGGACACAGATGGAGCTGGAAGCCATTATCATCAGCAAACTAATGCAGGAGCAGAAAACCAAGCACCACATGTTCTCATTCATAAGTGGGAGCTGAACAAGGAGAACACATGGACCCAGGGAGGGGAACAACACACACTAGGGCCTGTCCGGGGTGTTGGTGGAGGGAGAGCATTAGGAAAAATAGCTAATGTGTGCGGGGCTTAATACCTAGGTGAAGAGTTTATAGGTGCAGTAAACCACCATGGCACACATTTACCTATGTAACAAACCTGCACATCCTGCACGTGCACCTTGGAGCTTAAAATAAAAATAAAAACCCACAAAGCTTTTCTACTGTTTTTAAGTTGCCATTTTTTTTATTCAGTTCTCCCTTGTTTGCTATAAACCTTTGACTGATTTCCAGAGTTCTGTTAGAGTTGATTCTGACTTTTTTGTTTGAATTTTTGGGTGTTTTTATGGAGAGATGGGCCCATGGAACTGTCTATTGTGCCAATTTTGCGGGCATTATTCTGTGAAGTGAGTGGTTGAACACTACAGCTTGCCCATATCTTAGCATTGTGGCATTAACATCTGGGAAAGATAGATGATTTCTTTATTTTACAGATGAGAAAAGAAATGCCTGAATATAGAGCTGGAATTCAAGCCCATTAGCTGGTGGTTTTTCCCACCAAACCCCCAAATCCAGTTTCTGGCAGTACTTTGGTGACTGCCCAAAAGCACACACTCAATGGAAATCCAAGTCCCTTGTTGAAAAGCTGGCATTACTCACAGGCTTTTCCTCTAATTCACACCTAGAGACCTCTTCATCACATTATTTGGCAAAAGGGGAGGAGGTTTTGGAGAACAGATGCTACCAGGAAGTTCTGAATAGGATAGGGGTGTTTGCTGCTTCAGCAAGGTAATTAAGGTTAAGATGACAAAATGATTGGATTTTGGGGTGTATGAACCATTAAAAAATTACAGTTTTGGCTGTGCTGAGCTAGCATGTCCTGAACTCTGTCTAAAGGATAATTGTGTGATTATCTCAACTACTCACGGAAGTATCTTAACTACTCTGGTGTATGGGTACTTATCCATAAAATGCTGAGTTACATTTTATGGTATCTTTGTACCCCTCCCAGTTATAAAAGAGTGATTCTATTTCTGAGGCTTCCTGCTAGGAGTAGAAATAGCAGGGAATGGCTTTGTGATCTATTTCATGTTGTTCAAATTTCCTTACCCTCTGTTCTTATCTGTAAAATGGGAATTAAAGCAATTCATGGCATTCTATATTTCAAGGCTATGGAGAAGAATTAATGTACAAAAATGAGATAATTGACATGAAGCTATTTTAATATTCTGAAAATAATATATGAGTATAGAAAATTATCATCTTTGATCCCTTGTTCAGAATTTTCTAACTTAAATCTTTCTATCAGTATAGAGGACTACTTTGTACGTATAATCAAATGCTCCTCTTACAGAGGGAGATAATTTTTAAAAATTCACTCCAGTTTTAAACCAGCAGTTGACTTATGGCATATGTCTTCAATACATGTGTTTAATTTAATTAATTTTTAAAAATCTTTAAG
Seq C2 exon
GTCTGCAATAATTTCCCTGCTCTCATCGATTATCTCCCAGGAAGTCATAATAAAATAGCTGAAAATTTTGCTTACATTAAAAGTTATGTATTGGAGAGAATAAAAGAACATCAAGAATCCCTGGACATGAACAGTGCTCGGGACTTTATTGATTGTTTCCTGATCAAAATGGAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000108242:ENST00000285979:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0006717=p450=FE(28.5=100),PF0006717=p450=PU(0.5=1.9)
A:
NA
C2:
PF0006717=p450=FE(12.7=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains