HsaINT0101658 @ hg19
Intron Retention
Gene
ENSG00000160563 | MED27
Description
mediator complex subunit 27 [Source:HGNC Symbol;Acc:2377]
Coordinates
chr9:134738450-134759486:-
Coord C1 exon
chr9:134759445-134759486
Coord A exon
chr9:134738528-134759444
Coord C2 exon
chr9:134738450-134738527
Length
20917 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAGT
5' ss Score
11
3' ss Seq
TCTTTGTCCTTCACTCTCAGGTG
3' ss Score
10.86
Exon sequences
Seq C1 exon
CTTGATATATGGTCCAAATCCAACTATCAAGTATTCCAGAAG
Seq A exon
GTAAGTTTTACTTTTTGCTTCTTACTCAAGCGGCATTAGGAAAACGTGAATGCTTTGAGGTTTAAACATTGGTCTCAAATCAGAGGCTTTTGAAAAAGTGAAAAAAGCCAGACAGAAAAGGATGCTCACTGTCTGATTCCATATGTATGACATTCTGGAAAAAAACAAAACCTTAGGGACAGAAATCAGATCCGTGGTTGCCTAAGGGTGGGTACAGGGACTTGGCCCCAAAGGGGCACAAGGGAGTGTGGGGTGGTGGGAATATTCTTTATCTTAATTGTGGCGGTGTTACACAGCCGTACATGTTTGTCAAAACTCAGGACTATATTACTACAAAGGGGCAGTCATATTGTATGTAAATTATACCTTAGGAAAACCATAGGTTTTTGAGATGTTCCAAAAACTGTATTCTGAAAACCTAGTTTTAAAACTCGGTTTCTCAGAGCCCTAGCGGTCTCCACTGGTGCCCAAGGGATGGGCCAAGGGAAGCAGGCTGGCACTCCCTCACCCTGCCCCTTCCCCACTTTGTGCTCTGGGGACACTGTATCTTTTTCAGATATTGGGCTTCCTTATGAAAAACTGTTATGGGAAATGTCAGACGAAATGAAAAGTGACCAGAGAAAATTCATTTCCCCAGCTCCTGACAGTGCAGGGCCCCTTCCCTGGACTAACTCAGGCCCTGTGGCTGATGAGGATTCTGTCCCCACCGCCACACCCCCACCAGTCCCCACAGTACTCAGGGCCAGCTCCCTGCAGGGCAGCAGCCGGCTTCTTCTGTTCTCATCCATCTTCTGTCTCTGGTCTCATCCAGTAGTGAAATAAGAGAGTTGGCCATCATCTCATTCATTCCCTCATCCAGCTCAACAACAGGTGTCCACTCCCCAGCACTTTGGGAGGCCAAGGTAGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTAGCCAATATGGCAAAACCCTGTCTGTACTAAAAATATAAAATTAGCCGGGCATGGTGGCGGGCGCCTATAATCCTAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTAAACCTGGGAGACAGAGGTTGCAGTGAGCCCAGATTGTGCCATTGCACTCCAGCCTGGGTGACAGATGAGACTCCATCTCAAAAAAAAAAAAAAAAGTATCCACTGAGCCCCTTTGCTCTGTGCCAGGCACTGTTAGGTGCCAGGGCCACAGAGGAAACTCCAACAGGCAAGGAAGCCTAACAAATGACTCCAGGTGATTAACTGGGGGCTGTGGCCAGGAAACACAAGGGGGCCTCCTTCTGATTAGGCTAGTCAGAGGAAGCCTTTGTAGGGGAAACTGAGGCAGGCAGTGTGAGGAGGAGGAGCCAGCCCCGTGAAGTGGGGATGAAGTGGAGGTAGAAGGCAGGGCTCAGGTCAGGGAGGTGCCTCTAGGCCCTGGTGCAGAATTCGGATTTTATCCTTAATTCAGTGAGAAACCACTGACGGGATTTACACAGAGGGGGATGTGATTTTGAAAGCTTGGTCCGAGTTATCCCCACGATGAAGAATGGTTGTGTCCACAGTGTGCCAGGAAGCACAGGACTCTTTTGTAGATCAAGGTGAAATTCACATAACTTGAAATTAACCGTTTTAAAGTGAATGCTCCTTGGCTTGATGTGCCTTCACAATAGTGTACATCCACTACCTCTGTCTGGTTCTAAAACATTTCCTTACCCCACAAGAAAATCTGGTGTGCATTGAGCAGTGAGCATAGGACTTAGTGGATCAGAGGGGCGTCATGGACCACCCTCTAGAGGTGTTTACTGTACATAATCCACAGTGCCCCCTGGGCCCCTTTTTGGTGATAAGGGCTAGGCAGAGGACAGGCGTCTAGGATTAGGGGAGTAGTCTGAGGCTGAAAACCACACATTTAGGGAACCTATATAAGCATTACAGATTCATGATCTGATCACAGCTAAATGCAATGTGCTACCCTGGATTGGATCCTGAAACAGAAAGAGGTTACTAATGGGGCCGGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTCAGGTGGGTGGATTACAAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACACAAATCAGCCAGGCGTGGTGGCGGGCGCCTGTAATCCCAGCTACGCGGGAGGTTGCAGTGAGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTACATCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGGAAGGGAGGGAGGGAAGGAGGGAGGGAGGGGTTACTAATGGAAAAACTGGTGAAATCCAAATAAAGGTTGGAGTTCAGTTATTAGTGAGTAACCAGTGTTGGTTTCTTTGTTGTGACAAATGTACCGTAGTAATGGAAGATGTTAACAATGGGGAAACGGGGTGAGGGACATGGGAACTGTCTATTGCATCTTTGCAGCTTTTCTGTAAATCTAAAACTGCTCTAAAATAAAGTTTTAACAAAGAAAATCATAGCTTGATTCTTCTAACACCCTTTACCCAACTGAGCTCCCTGGAAATGTAATGAAGAAAATAGCCTCCCTCCTTTCCTCCCTCCCTCCTTCCTTCCCTCCCTTCCTCCCACTCTCTCTTCCTCCCTGGTCCCTGGGTCTGAAGCATAAAGGAAGGAAGGGTGTGGTTACGCACAGGCTTTAGTGCAGGGAAGCACATTTCTCATCTTAGTGTTCTTACCTAAGTCACCATACCAGAGGTATTTACTTGTTTCGCATGCAAAAAGTCTCAGCCTTCAATGCTAACGTTTTCCGTGCTGACTGTCCTTGTCATTTTTCCCCCAGTGGCTGGTTGAAAAATATTCTGAGGAGAAAGAATGCTGCTCATTATCCTTGTCTTGCTTTGCTTTAATAGTGAAGAACATTAAAATGGTCAGCTTTTCCCCTCAATCTGGTCCTTATCTTCATGTCCTCTGTGGTATTGCAATGAGTTCCCTCCTCCAGTCTCCACAAAAGGCCAATGATGACTTCTTGAGGGCTGTAAGCATTGCAGCTTGTAACTTGGTATTTAACAATGGTCCATTTCCATTCCAATACCCTTGATGAGGGAGGGGCTTGCACATGCTCACTTTTGCATGTTTTTTTTTTTTAATGTTCTTGTAGTATTAAGTATTTTTTAATGCAAGCAGAAAGTGTATTAGGAAGTTGTAAAATGTATAAAACACAGATTTGGTGAAGCATAGATTTAGAAAGACAGTACTGTATTTTTATCCTACCTCCCTTGAAAATAACCTGCCAGGCACTCTTTGTATTTATTTAAAATTACAAACACACTCTGAAGCAGAAGTGTTTAAAATTTGATATTAGTCTAGTTGGAGAGATTTAGGAGCATCCGCCAATTCCTTCCTTCCAGTCTGTGTAACACGTTTCAAGTAGTAAAAATTGATGAATTCTAAGGGATGGGAATTTTATCTCACTGGTGAGTGGCATATCATGTGTATTTGTGCAGAAGCCTTTCTGAGATTCCTTTATCATCGCTCCTTTCACCTATTATTAACTAAGTGGACTTAACCTCTGATATTGACCTGTACCAGATTAAAGAACCACAATTGGGAGAGGTGGTAGTGCCTTCTGATTACAACTAAAGGCAGATAACATTGAAGTCCTTTTTTTTCAGGGACAAGTAAGAATTAAATTAGTGAGTCCTCTCTCTTCCTAACTAAAATGTCTTCCATTTGCTGTCAAATGAAGGAAACATATTGGAAAATAATGTACAGAATTAAGCTTAATCCTTTATCAATAAAGCCTTCAACTAATCATCATCACACAGAATGAGTTTGGGATCTTGTTAGAAAAAAAAAAAGCCTGTTTCTGTATCACTGAGCTTGTGGGAGATGGCGGTAGAAAGCACGAAGCATGCGCGGTGTAGCCTCCATCCCAGGGCGGTGACTGGCGTGCCTATTTCGTCGTGTTCATCTCAGTGGCCAGCAGGTAGACCTCCCTGTGCCACTGCCAGGCCCTGCACTACGTGCAGAGGTGGGACCACGTTGTCCTTTGCAGATTCAGAGACCTGGCACAGTTTATGGGGTGACGTTAAGTATTTCAAACCTAAATCACCAAAAGAGAAGGATTCGGTGGCAACGTTTCTAAACTCCGCTTTTTAGGATTTGCTATTCCTCAAGATTCTATTTTCCTCCTGTCCACCCACTTATATATGGGGTGTCATGATTGATGTTGCTTGTAGTGTTTCCCAGAAAGACGCTGTTTGGGAGCACTGCGGCAGACATCTTCCACCTGCTCTGCCTGTTTGCACCCAGCCAAGTCGACTGGCGAGGGTGGGGTTCGTTCCCAGCATCATCCAGAAAAGCTCAGCCTGCAGCAGTGGCATGAAGTGCATTGGGGAGCAGCATGACATGCTGGAGGATGCTCCTTGGTCATCAAGAAGAGGAGATTGCTCAGGCTGAAGATAGTACCCAGATGTCCTGACAGTGGTGGGAGGTGCCACAGCTATGCCCACCTCTGAGATGGGAGTTCTGGGCCACCAGCAGCAGCTCACATGGCATTAATGGAGGAATTCTCCTCCTGCTCTAGCTGAGGTAGAACCGCAGAGCTCCCTCTCCTAGGCCTTCATTATGTGGTTGCAGTCACTGTGTTAGGCCTGTTTTCTTGCCCACAAGAAGCAGCTGTGGCCAGCCCAGAACGAGGGAAAGCAGAACTCGGAAAGCAGGAAGCCACGCCCCCCACCCGTGCCCACCCTGAGGTCTCCTTCAGTGTGACAGGGTAGGGGGATTGCCTTGCAGAGCCAAACCAAGCTAACACTCACCTTTTTATTTCTGGCAAACAATGTCAGGAGGTAGGAGAATGGAAGCATGCCCTTGTCACATTCTCTCAGGCCCGTGCCTGACCCGCTGGCTTACAGCCTGAGCACCTGAGCTTCTGTAGCAAATCCCACCACAGGAAGCAAAATTCTGCCTTCCTTTTGTCTGCAGATGTTCATGCCATCAGCAAGCCCTTTTCACTCTTCCTCATTAGACCCCTTACCCAAGTGTGGAAGTAGCAGAGGGCTGGGGACAGCTTGCTATGGGTCTATGGCTGCTAACAGGTTCCCATCATTTACTGTGGTCCCTGGAGGCTCCTTGCACTTGGTCCTAGGGTGAAGAAGCTTTTTATAGCCAGCAAGTCTCCAGCAGAGTAGATTCAGAGAATGGGACTTAGAAATGGGCGGGGTGGGGGCGGGTGACCATCTGAAAGGGCAGAATCACAAAGAGCCAGGAAAGGTTTCAAGCGTGTTCATATTTTTCTGACATTTAAACTCTGCAGGGGCAGCCACTGTTTTGTTCTTTAACCCCCTCATTTCAAAACTCTGTGCATTTTCATCCAGCAATTTAGGGAGAGTAAGAGCAGACCGACAGCTACTCACTGCATTGTCTTGCTAGGGTGGCTGGAGAGAGAGGTGGAGTGTGTGTACCACCCAGGTTAGGCAGGGGACATCAAGAGAGAGGCCAAGAGGGACCCACACACACTTTGCAGCTTTCTCATCAGAGGTAAGGGACAGCATGAAAGTAGCCCGCAGATGTCCAGCTCTCCATCCACAGTCATTGCAGAGGGATGAGTAACCCTTTCAGTTCTGCACCGTCTGAACTTTTAGCTGTGAGCAAATGGATTGTGCATGGTGGGTCATGTTCTGGGCAGGGTGCCGCTTGCTTCTTCATTCCTTTGTTCATTTATTAGTTGATTATTTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTGTAATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTAATCTCAGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCCCTAAGTAGTTGGGATTACAGGCATGCGCTACCATACCCAGCTAATTTTTGTATTTTTGTAGAGACGGGGTTTCACCGTGTTGGCCAGGCTGGTCTTGAACTCCTGATCTCAGGTAATCCACCTGCCTCGGCCTCCCAAAGTGTTGGGATTATAGGCATGAGCCACCGCGCCCGGCCTGTTCATTCTTTTTAATATGCAAGACTGGCCCCTAACTGAGGCAGACTTGATCAAGGTCTGTTTACTCGGTGGCCACCAGGTGCTTTTCAGTAAAAGAGATTGAGTCAGCCCTAGAAGACTCAGTTCTCTGAAAAGTGGGTGGACACCTGATATTGCGTTGGTGGGTACGTGGAGTACCTAGCGTAAATTGACTACCAACCCCAATAGTATTCAAAAATCCTAACCTATCGCTCATTCCAACTCCTAGGGAAGGAAACTGTTTCAACATGGGATCATTCCCCAGGGATTGGAACCGTCACCCTCCTCTGAGTCAGGTTGTGCTGCACACCTTAGTTGGGTGTGTGGTGCCGCTGCAGTGTTTCACACCACTAAAGAGGCTCCATAAACAGTCATTACATTGTTTTATTTATTTATTTGAGACGGGGTCCCACTCTGTCGCCCAGACTAGAGTGCAGTGGTGTGGTCTCGGCTCACTGCAACTTCCACCTCCCAAGTTCAAGCAATTCTCCTGCCTCAGCCTCTCGAGTAGCTGAGACTATAGGTGTGCACTGCCACACCCAGCTAATTTGTGTGTGTGTGTGTATTTTTAGTAGAGACAGATTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAATGATCCACCTGTCTCAGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACTGTGCCCAGCCGCGTTATTTTCAGTTTCTAACATTTCCTCCTACCAGCCTCCTCTACATTTCCTTCCCAAAGCCTCTCTTCAAATGCCACAGATGAAGGCCTGGAAGAGGCCATGGTTGTGACAAAAGTTCTAAGACCTCAGGCCAGATCTCAGTCCCATTCCCTGTTCGGTGCCCTGCACAGGTGAGACCCCCACACTCAGAGGGACTCCACAGCTGGGAGCTGCCTCCCAGAGTCGTTGAAGGCCCTTCTGTCTTTTATAGATCTCAGCCCTCTGACCATCTCCCCGCCTCTTAAATGGTGATTAACTTTTTCCAACAGGGAGAACTTATGTTGTAAGGACAGAATGTGGTGTCATTTTCATCTGTTTCTGTGCGTTCTGTTGCTGCCTCACAAGTGTGTCCCAAACAGATAGAACTGAGGGGACAGCTTTCATCCTTGCAAAGGGAAATGGGCCGCTTCATGTAGCAAGACAAAGTTCTGTCCATGACTCCGATGAGTGGTATGCCCAAGAGATTTGTGCGTGAGCCCGCTAGTGGGCTGGCGACAGGCTTCAGGGAAGGAGCGGCGGCAGACGGTCCCAGGGCATCCCTGAGGGCAGCCCTTCCCTCAGCTGACAGCTGGACTGTATTGACCAGGTCGCCAAGCAGAAGCATCGGCGCGGGGCTCTGGGAGCTGAGAGCCGCAGGGAGGGTCGTTAGGCTTAATCCAACAGTCGAAAACCCTTTTACCGCCACCTTCTCTCTTAATGGTCTTGTTTGAATATTCATAAGCATCTAAACTAAACTCAGGACAGATTTGATCATTTGTTCTCCTCTTACGCCGCCCCAGTACCTTTCCTGCACAAGGCTCCCTCAGCCCCTGCTGAGTGTGAGCATGGCCCAGGAGCTCACATGAACCCAGTTTTATGGCTAAAATTGAACCAGGAAAGCCTGGGCCATCCTGTTGACTTTCTGAGGGCACGCTGCGTTGCCCTGGAAGTGGTCTGTGGCTTTCTGCCATTAGAGGAGTCACAGAGTAGTCATCTGTCATCTGTATAGCTTGTTTCTTCCTGAAGGGTTGTGCGGGCTGCAGTGTACTCAGGTCAAAATCTGAAAACTGCTTCTGGAAAGACTGCCCACCTTCCCATTCCCCAGGTCTCCGTCCTCAGCCCATAGGGCTGTAAACTCCATGCATGGGCTGCCAGCATGGCAGGACGGCCCCCACCCATCCGCTCTCTAAGCCCAGGCTGACCTCCCACCACATTCCCCACAGCGACCATCCCAGAGAGAGACCACATAGCAGAGTGGCTAAGAGCCATTCGCCGTGTCATCAGGTCCCGGCTCCCCTACTGTTTCCTGTGTGGATTCACTTGCCTCAGTTTCCTCATCTGTAAAACAGAGACGCAGCCGGGCGCGTGGGTCATGCCTGTAATCCCAGCACTCTGGGAGGCCGAGGCAGAGGATCATGATCCTAGGAGTTTGAGACAAGCCTGGGCAACATGGCAAAACCCCATCTCCCCAAAAAAATAAAAATTAGCTGGGTGTGGTGGCATGTGCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATGGTTTGGGTGTGGGAGGTTAAGGCTGCAGTGAGCCATGAGAGTAGCTGCCCCACAGACTTGGTGTGAAGTTGAATTCGTAGGTATGAAGTGTAAGGTGAATGTCTTGTCTACCACCTGGTCAACTTCTCTGAAGTGCCTGTCAATGGTGACACTCTCTTGTCCTGAGAAAGTTCTCCCTCCATCCCCTGTGGGCAGGCTTCCTCCCGCAGGCCTCTTCCTCAGTGACCACCCCTTCCATCTGTGCTTCCCATATCTCCACAGTGGACACGGTGGCTCAGGGTATAGGCTGGAGTCAGACAGACCTGGGTTTGTGCCCAGCTGTCGTGTGTAAAGTCAACCCAAGACCCAGCTGCTATGACAGACCTACCCATTCCCACCAAAGCATTGTCTGCCTTCTCATTTTTTCAGGCATGTTATCTGCTCTTCTGGTCACAAAGTGAGCTGAAGATCCTGTAAGACACCACAGTTACAGCCGCGCAGCAGTGCCCTGTGGGCAGCCCTGATATGCTGATGTAGGCAGGATCCTGGGTCCAGGAACTGGATCAGTCCCTAGGGTCCTGGGAGGGCCAGTGGCGCAACCAGTGATCTCCAGAAGGCACCCGAGATTGAGATGTTGTGCCCCAATTTCCCGTTTCCCCCACTGAGCAGGGGTGGCTGGGGCGCCTGGCACCTTGGCGGCTGAGCTGCCTCTTGGCGGGGTCTCTCTCCCAGCTCTGCAGTCTGCATTCTTCTCCAGTCATTGCCTCAAGTTTGATGGAGAAGTAGGTGGTATTGTCTGTGTTTTCCTGGGAGCCCAGATGTCTTTGGATGTTTCTCTGACTGCAGGGCCGTTCCTACAGAAAATAATATCACACCAAGTGGGTGCAGAACAATTCAGGTGTCTTTGGGCTTGGACTCTCCTGGCAGCCAGTGACAGAAACTGACGTTTTACCATCTGGAAAGCACTGAACTTTTTTCTTTTCATCTAAATGAAAAGCCTTAATTCCTTAATCCTGAGAAAGGTCAAAGACCCAGCGCGTCTCCTCGCAGCTACGCACAGGGCCTTCGGCAGACGCCGAAGGCGGTCAGGACCCTGGAAAGTTCCCTCGTGTCTATCCTGGGGTTTCCCTGTTTGCCCAGGCCCCACCTTCCAGGCAGTGTCCACCTCTGCTTCTCCACCCCATCCCTTCCCTCTCACTCCGCTCCCCTTTCCCCAGTGGCTGAAAATCAATACATACACTCCTGTCCACTTTCTCTCCCATTCACTCAGGCTCCTGCAAGGTGAGCCGTACCCAGTGCTGAGCCACAGTCCTCTCGGAGGCCCTGAGCTAGGCCCAGGGAGGATGGAGATGTGGCAGGTGTGGCCTCAAGGAGAGCACAGCTTGGGGGACAGGGGCATCTGGTCATAGGTCTGGCAAGTGCCCGGCGGGGGTGTGCAGAGGATGCTGCTGAGAGTACAGGCAAGGCTGGGATGGGGAAGACCCTGAGCTGAGTCCTGAGGGGTGAGAAGGGCTTAGCCTGACAGGAACATTCCAGGCAGAGGGGCCACTTGAGCACAGACGTGCGCCAGGAAAACGTGTTGGGGCGGGAGGCGGATTCCTCCAGGAGCCGGCATTGCTGCCATGGAAGGTGGGGGCTGAAGGGAAATGCGGCTGAGACCCAGGTCCGCAAGGCCTCCTTTGCTCCACCAGGGCTTTCAGAAGGATCCTGTAGGTGGCTGTGGAGTGGCCAGCGGGGGTACATCACCCCTAAAGGCTGTCTGCAGCCAGTCTGCACTCAAGGGTCCAGGGAGTTGGGGGCTTCCCTTTCAGGCGTCAGTGGCACCCTGGCTGGGACTTTAAAGAGGATAAGGTTGGAACCCCCAAACCAAACCACATCTGATATGTAGAGGCCCTGGTGTGTGCCAGAGATCTTGCTGAGTACATCCACAGGCTCGCCCCTCTCAGACACAGAGCTTGATCTCTAAAGTGTCAGCAGGGATTTCGGACAAGATGGAGCAGCAATGTCTGCCTTCACCTCTCCAGTTCCAGCTCAGGCAGCCTTGCCTCTGGTCTCATCCCAGAGCAGCATGCCTGGCTCTGGTGGACAGTTATAAGCCCTTCAGAGCCCATGCAAATGGCTCCTTCATTAAGCAGAGGAGGAAATATTGATCCCATCCAAGTAATCCCAAGTCCCTGTGGGCTTCGATGTTTCCTCTCCAGGCTGCTAGGCCCGCTGAACCTGTGGCATACAAATCCGAGGTACAGATTAGAGACGAGAGCTGCATAATAAAAAATAAATCCCCTGCTTCCGCTCTACTGTACTTTCATCCCCATTTGAGAAGCTCGTCTCTGCGCACTCCCCATCGCCCCCTAACATCACTGTCAGGGCTGACTTCATAGCATTCCAGTTTCGAAATAATGATGGCTCCTCTTTTCATGGAATGAGTACTTCTGGGACTGTTTTAAATATTCTTCATCGAACCAGCACACATCCTTAGAGCAACACTGCTGGCAGGGATTGCTGTCTCTTTAAACATTTAACACACTTGGTTCATGTCTTTGCCCACAGGACCCACAAAGAGTTTTCTCCTTCCAAGAGATTCCTACTGTCCCTCTCCTTACTGGTGGGTCTGTCCTTGGCAAAACTCTTAGTAGAGACCCAAACTCTTGGGCTGATCTCCTTGTGTAACATTAAAATACATCTACCCAATGAAAGTCCATTCTGATCTCTGCATCGTGGGAACTGCCTGGGCACCTGTGCCTAGCACACGTTTGGCTTTGCTGCCTGCTACTTGAGTGCTCCAAAGTCTGGCTGAGCGGCACAGAGGCTTCCCACACAGAGGACAGTGCTGTGCAGGTGGCCTCCCTGGTTCCAAGCTGAATCCTCAAGCTCTTTGAACTGGCCTGGAATCTGAGGCCCACCTGAGGGTGCCATCGCATCAGGGCAGCAGGTGGGTTCCTGGATTGGGGCAGGAACTTCAGGGCACAGTGTGCACATGCTGCCAGGAGATAACTAGGACAGCTCAGGCTCTGCAGCAGCATCTGCTGAAAACCTAGACCTAGAGGGGCCTGCAGAATCACCCAGCCCCACCCCAGCCTCCCCACGCTCTTCTACCGAGGGCCAGCAGGGAAGAGGCCCCCCAGGCCATTCGCCACTAAGCTAGGGTCAAACCCCGGTCTCCTTACGGTTCCCCTCTGTCTGCCTTTTTGTCACTTTCACCCAGATCTAAGAGAATCTTCTCTTCACAGTACGTAGAAGCCGATATTGGCTGGAGGGAAGCCACAGTCTGGGTCCCTACCAGGCTTCTCTTTTAAATAAGCAACTTCTAAACACTTGAGTACTTAACTTTCCCTGTTTACTAATCTTGTGAGGAAATACTCCGAATAGTAGAGGCGCCCGCTCTTCTAGCTTGGCCTCGGGGGCTGTGTGCTGGCAGATAATGCCCTCAGCAGGTGCGTTAGGAAGAGCGTCTCTGTTCAAGCTCAGCTCCCCCAGGCGCTGCTCGGCCACAGTCCTGTCCCCTGGTGGTGGGAAGCAGGCAGTGGCCCGCAGCGGCCCTTGAACCTGCACCCAAAATCATCTCAGGGAGCCTGTGAACTCCTGGGTCCTGGTCCCCAGCCTGGTCCACCAGCCAGGAGCTGGAAGGCGGTTCCCAGCAGTCAGCCTCCAGCGTCTGTTCCTCACCTGCATGCTGCGTCGCCAGCCTCCACTCCGGCCCAGGAGCATGCCCCCTGGGGCCAGATGATGCCCATGACCTTTGGGCACTCGGGAGCCCCTGAGGACAATCCCTGGATCACTGAGAAATACAAGGGCCCCTGTTTTAGAATGCCTGGCAGGAACTGTAAGTTTCCATTTAAATCAAATCAAATACCCCAAGTTGAAAGTATTCAGAAAATTCGGAGGAAAAAAGATAGGAAAGAGGTGCAAGGTTGGCCCATAACCCCAGCACTTTGGGAGGCAGGAGGATCATTTGAGCCTAGGAGTTCAAGACCAGCTTGGACAACATGGCAAGACCTCGTCTTTACTAAAAATTAAAAAACTAGCCAGGCGTGGGGGTGTGTGTCTGTAGTCCCAGCTATTTGAGAGACTGAGGCAGGAGGATCACTTGCGCCCAGGAGTTCGAGGCTGCGGTGTGCTGTGATCAGACCACCACACTCCAGCATGGGTGACAAGTACAAGGTCACCCCTGAAACAGAGGACAAGGGTCTTGCTGTGAATGGTGCCGTTGTTCCTGTACCAGGCTGGTGACTGGCATTGCCATCTTCTTAACTTTTCCCCTTCAAGGAGCCCAACAGGCCCTTGCTTTTTAAAGAGGAAACTGCTGAGGACAATAGTGTATTAAGAGGGTTTTTCTCCCCAGTCCTTTCTGTGTCATTACAGTGTCCTTTATTCTTCCCTTACTGCTACAGAACAAACCTCTATCTGGTCAACATAAAACCTGGAATCTGGGAGTTAAGCTTAAGTGAGAAATCATCTTGCTAGGCCTAAACCTGTTATCTTTGCCCCCACCGCAGGAGAGGGCCTGAGTAGGAAAAAGCGTGTGGGTGCTGCATACCGAATGTGGGGTGTATGGTAGGGTGAGCACCGAATCCGGGGCGTACAGCAGGACGCACACCTGGATCCAGGGCTCACAGTAGGATGCACACTGAATCCCGGGCACACAGTGGGATGCACACTGAATCTGGGGTCCACAGTAGGACCATCCCACTCTCCCCGCCCTGCACCTTTTCTCACACTACACTTTTTCATTCCCTCGATGAATGTGTGGGCATGCCCACCTGATGCAGCCGCCTTGTATTTGCCCGATTTCCCCTTCTTTGTCCACAGCAGGGAGACTCATTCAATCTGGAGGTCTTCTTGAGGGCCCACCGGTGTCTCTGTCAGACCGTTTGGAGGGTTGGGGCCAGCACATAGCAGGGAGCCAGACAGGTTGAAGCTTCTGGCTGAGAGGTGGAAGGAACATTGTATAAGTGACAGGAACTGGGGTGTAAGTGAGGAGACTTGTTATCCAATCCCATCTCCACCCTCAAAGTGCTGAGGTCCAGTCCCTTCTGGGGAGGAGAGGGCCTGGAAATGGCACTTTTCTTCATCCCCCCACAACCCCTGTCCACCCCAAGAGGCCTGGAGTGGGGGGCCCATGAGGCTTGGGGCATAGAGTCTGGGCACTCAAGCTGGGGTTCAGAAGGTCGGAACAAACTCCTGCTGTGCCACCTAGCAGCTCCTTGGCTTGGGCAAGTCACTTAACCTCCCTGTGACTTAGCCCCCTGACTTAGAAGTCCCAAACGTGAGAGTACCTCTGTCATAAGGTCATCGTGGGGATTCAGCGGGCTAAAACCACGAGGGGACACATTTGGCGGGCGCTTGCCATGCGTCGTACACTTGAGGTCTGTATGTCAGTGCACTGTCCCTGCATCGGCCCATTTAATCCTCGCCCAAGGTCACACAGCTCACAAGGGACAGATCCAGAGGCTGGGCTCCTGTTGGAGGAGCCACACACCCTGAGCTGTGCAGCGTAGACCAGCTCTTGCACAGGATTAGTGCTCAGTAAATGGCGATGTGGGTTGTTGCTGTTATTGCAAGCAGTGCCACTCTGGGTTTAGCTAAAATAACTCATGATCTCCAAAGCACCCTCCAGCTCTGATTGTAGGAGGGGGGCTGTCAGGAGCTCCATGCACACAATATGGCAGAGGAGCTTTGGGAGACTGTTTTGACTGGCATCTCCTTTTCCAGCACGTTGACTGGCAGCTGTTTCAAGGTCTCTTGAAAGAGTCCCTACTCCCTCCCTAAGCTCCATTCTCTCCTGGGTTTGGATATGCTGAGAGAGGGTAGGGAAAACTGAAAGGAACATTGATCAAGTGGACTGGATCTGTTGGCAGGCAATGGAGATGTCACCCTTCTCAAAGTAAATCACTGCAGGTCACCATTGAGACGGGACACACCCCAAATGAGGCATCTGAGACTTCTCTGCCTTGGGGTGAACCAGGCGCCTCCCAGTGAAACCCCTCCCTGCATCACCCTCTGCCCCTCTTTGTGAGGCCTGTCTCCCCATCCCCGCATTCCTCTTGCTTCAGGGACCCCTGCCTCACTGGTTTATTGCTACCCTCCTGCCTTCTCCTCCCTCCCTTTCCTTGGGCTTGCATCCCTTTGATGTTTTTACAAGCCTTTTTTCAAACCTGCACTCACTGGTGGGTGAATCGCCTCCCTCTCCTTGGGAGCATTAGTGCCCTTCCTGGCCTCCGCCAAGGGGGAGGGCGGCTTTTATCTCCCAGCGGAATCTCATTAGCTTTGCCGCACAATGGGACCGAACCTCGGCTGCCACAGAGTGGATTTAAATTAGTTAATAGCAGATTTTTTTTTTTTTTTTGCCCCAGGCCTGTTTTTTCCAAGTCTTGGATGCTGAGCAAAAAAACAACTTTGTTGTTGAAAAATGTAAAACAAAAAAATATTGAAGGTGGAGTGCTTTGACAAGACGGAAGATCACTGTAGGTGAAGTTCTCCTGTGCTCCACAGCCACCCAGAGGAATTCCAAAACCAGCAGTGGAGGACTTGGGGAGGACAGGAGGGAAAACATGGCGAGTTCATCAGCTCTGTTTCCTTTATTAAAATATTTCTGTAATTGGTGGTGGGAAATTGAAGAAATCAAGTGATTGCATCAGCGCTGGAAAAAGCTGCCAGCACTTGGCAGTGGAAGAGAATATATGCTTTATACTGGACTTTTTGAAAAAGAGGCTGAGTTTGGCCAGATTGCCGACCAGCAATGGAAAAACTAATTAGGTGCCTTGCCTGTGAGCCAGACGCCCAGCAGGGCTGTGGCGCATGGCTCCCGCCGCCTCTGAAGAGGACACTTTCTAGTGAATTCAGTTCGTGCTACCCTTGAGCAGCCTGTGCTACAGCAGGCACATTTGTGAATCTCCCAGCCTGTGCCTGGCGTCGGAACTGTAGCTTCCCAAAGACTTACCTGCCCTGGGAGATGGCGGGCAGCTGCTGGCCACAGCCCTGGGCCTGCACCTTTATCTGCAAACTGGGAGAGCGGGGATGGGAGTCAGTGGGTAGGAGGTGGGCAGAGGCCTGGGCCTCCCAGTGTTCGGGCTCCCACACTGCTGCCCTCACCCACTATGTGCATCTTCCCAACTTCTGGACATCCTCACTCCTCCTCTGTCCAATGTAAATCAGAATAGTGGGCCGGGCGCAGTGGCGCACGCCTGTAATCCCAGCACTTTGTCAGGCTGAGGCAGAAGAATCACTTGAGCCAGGAGTTGGAAACCAGCCTGGGCAATACAGTGAGACCCTGATTCTACAAAAATAAAAAATTAGCTGGGCGGGGTGGCGTGAGCCTATAGTCCCAGCAACTCAGGAGGCTGAGGTGGGAGGATTGCTTGAGTCCAGGAGGTCAAGGCTGCACTGAGCTAAGATTGGGCCACTGCCCTCCAGCCTAGGCGACAGAGCAATACCCTGTCTCAAAAGAAAAGAAGAAAAAGAAAAGCACCTATCTCCAAGTTAGTGTGGGAATTAAATGAGAGGGGCACATAGGACTTGGCACATAATAAGCTCTTATTAATAATAGCTACTATAAGTTAATAAAATATCCGATGGATCTTTTAAAAAAAGCACTTTTCAGAAATAAGGAAAAACCCCCACTCCACAAGCACCCGTTGTGAAAACCCTCCACCCTGGCACCCCACAGTGCCCACTGTGAAACTGGTACCATTCATTTTGATTCATGAGAAGACAGACTGTCCTTCTGATTTGTATTTCTTTGTTTCATGGCCCAGAATCAAATGCCCAGCCCTCTGGGGGCCATTCTCCTGTAGTGCCTGGGATATGCCCCAGCCTTGCCACTCAAAGCCCAGTCCCTAACCAGCAGTGTGGGCACCCCTGGGAGTCAGCTGGCAGTGCCAACGCTCCACCCCTCCCCGAGCTCCTAGATGAGAATCTGACAAAAGACCCCCAGTGATTGTGTGTTCACCAGCCTCGCATTCTCATGCATTTTAGCATCCCTAGGAATAGCCTGGAGGGGCTGACTTAGTGTCTGGGCCCCACCCAGGAGATTCCAATGCTGTGGCTAGAGAGGGGCCCAAGAGGGCAGATTTCTAACCAACTCCTAGATGGTGCCAGCACCGCTGGTCCCCAAACATTTCAAGCAGCACCATTCTTAAGGGGAAAATTCCTTGGCCGCAGCTCGAACTTGCTGTGCCACCACTGTAATGGGATTGGGAGACCTGGCCAACATGGTGGCCCATTTCCTAGATGTGCAGTGAATATCCAAGGAGGCAGATTGGTCTGCAGAGAGGAGGAGGATGCTGAGTGACAAACCTCCTGTAGTTCTGCACAACTCAAGCTCATTTCTTCCTCACATTACATATCCATCCTGAGTTTTGACGGGGCTGTGTCACTCAAGGATGAGTGACCGCTGGTAACTTCTACCACAGAGGGCAAGTCCAAGATGCCCCAGCACCTTAGAGGTAGACCAGAGCCCAGGTCCTCAGCTCCTGTCCCGCAGTCCCCACTCCTTTCAGGCCCCTGGCTCCACCCACCTCATCTGAGCCACTCTCCCCGCAGAGAGTCAGAATGGCGGTCCTTCTCACCGTCTGCACACATGACCTGAGGACCTCTGCATCAGGCACTAGACTGACATGGGCTCAAGGTAGGGAAATTGACACGAAACAAACATGGCAAAAAATACCAAGTTCAGATATGAGGATTGAGATGGGAGAAGAGAGCCAGGCAAGGAGACAAGCCCCATCGGGGGAGCCTGGGGGGCTTCCCTCAACACGCGAAGGAGAGGGGGAAAGGACAGAGGCCCGTGCTGAGGGGAGGACTCAGGGAGGACAGAGATGGGCATTTGAGGAGCTGAGGGACCCGAGGAAAGGAGGCAGACACCGGGTGCTGCAGGGTTTCACATGGAGTTCACAGTTCGCATTTCATCCTGAGTGCAGGGAAAGCCATGAGAGCGTTTTAGGGGAGTGACATACTTGGGTTTCTAGTTGAACGATGGCAATCACTCATGTTTTCTGACCAGCACACGCTTCTGCCCACTACTTCACCCTCACTGTCATCCCCTGTGGTAGGCACTCTGTCATTATCCCCATTTTCCAGATGGGAAAACTGTAGCTAATAAAGATGAAGTGCCTCGCCCAAGGCGTCACTGCTAGAAGGGATGGAGCCCACGCTCTTTCCCTCTTTGCTGCAGAATGTTCCCTCTGAGCCGTGTTGAGACAGGCAAGATGGGAAGAAGTAGAAGGATTTGAGATAGATAACTTGGAACCACGAGGCTGCTTGGGTATGAGGCAGGGGGAAGAGAGGCGACAGGGCAGGGCCCAGGTTTCTGGCTCAGGCCTCTGGGTCAAAGGCCATTTAGCAAAAATGCTGGAGGAGGTGCAGGTCTGGAAGACCACTTGAGATGTTCCTGTAATTTGCACGACGCCTTGCCTGGAGAGAGCACCTTGCAGTTATCAGTACTGAGTTGTCTTGGAATGCTTGGAGAACTCAAGTTCAGCCAGAGGAGGTCAAGTCCAGAGGTCAGCTGAGGAAGGGAGGAGGAGATGGGCACAGATCTGTCAGGCCAGGGAAGATGAGCTCAAATAAAGATCAGGAAGCCAGGCCAGGTACCCAGGGAACAGCAGGCTGGGGAGGGTTTGGGGAACCTGGGAGTGCAGGGTCTTGTTGGTTTGGTTAGAGGCTCTAAACTCCAAAGGCCACAGGGCCCCTGATGAGTGGAGTAGGCTGGATCCAAGACCCTAGGGTGCTCAGGCAAACTGCACGTGTCACCGCTCCTCAGCTGCTGCAGCTGGTGGCCACGTGGCAGTGCCAGGGTCACACTCACAGAGATGAGGAGAAGCTGGGCCCCCTTTGATCTTCACAGTAGCCTATGAGATGGTCCCCAGATCCTCCGATGCTTCAAGAGGAGCTGGGCACCACAGTTAAGTGAAGTTTCCTAAATTTTAAGTGTTGGTCATTTGTGTTTAAAAATGTGAAAACAAAAGAAATAAAAGTGCAGCCAGACAAAGCCTCTCTGCCTGCACATGGCTGCTGAAAGGCTGAAATGGATGGAGGTGGTCTCACCCAGGGGATCCCAGGGACTGACGTTCCTATCGCAGGGAAGGTGTCACACACGGAGCTACGGAACAGCAGGGCCGGAGCAAACAAAGCCAGCCCAGCTGCCTCGGCTATTCCAACAGGGGCTACACTGGAGACATTTTAAAAATAAAGGGGGTGAGGGGAAAGAATTCTCCAGAAACTTTGGTTCTTCTGTAATGGCAAGTATAATTGCAAAAAACATCTTGTCAGCCTGTAAAATGACACTTTCACAGGTTTTCTTAGCAAGGGAGCTAGATGGGCAAGAACCAAGCGTTCAAGTTCGGGGACCGTTCGAGCCCAGTTTGCTTTGCTGTGTTTCGTAGCCATTAATGTCCCCCCGCCAATTACCACCAGTCATTTTGCAAAGTTATCATTACTACTGTTTAAAAGAAAAAAAAACATTGCTCATTTTAGAAAGCTGTCTGTCAAAAATGCTTAAAATAAAAGCAGTCTTGGCATTCGAAGGAATAAGTACCATTTATCTTGAAAGCCACTTGGGTAAGAATTTCTCAACAGTGTTGGCTACAAGAACCGTTGATGTATTTGCAAGAAAGCGCAGGTGTTTATGGTACATGGCCTTTGGTGGGTGGGCGTTTTTAAGTTTACTTCTTTATTCAGCAAATATGTATTGGGCACCTGCTGTATGCAGGGTAATATCCTAAGGCCTTGGGGATGCAGTATGGGGCAGGCCGTGAAAGTCCAGTGGGAAATAGGGCAAGTCCAGGGCCCAGGCAGAGCAGAAGAGGAGACTGGGCAGGCGGGGCTGGTGGCATTGCCAGAGAGTGAGTGCTTCCCACGCCTGGCCTCACTCTGTCCTCTCACGAGCCTTACTCAGTATGCAGTACAGTCTCCATTTTATGGAAGGGGAAACTGAGGCTTAGAGAGGCCCCCATAAGAGGCCAGGGGCCGGGCCCCGGCTTGCCTGGCTGCAGAGCCGGCGTCCTCACGTTTTGTGGGGCAGCCTCTCCAGCTGCAGGTGTGGACACACATCACCGTGCGGGGCGCGGACCCTGGTCTCCACCTGCCCAGCTTGCTCTGCGCCTGCATGGGTTCAGCCACATACACAGTGTTCATTGGGGGTTAGAAAATGAACACGTCTACACAAGTTAGACCTATGTTCATTCTTCTCAAAGCTAAGGATTTTCTCTGGAGTTTTTTGGGTTTTTTATTTTAGGTGTGGTTTTTTCATTTTGTTTTGTTTGAGACAGGTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAGTCACAGTTCACTGTAGCCTCAACTTCCCAGGCTCGGATGATCCTCCCATCTCAGCCTCCTGAGTAGCTGGGACTATAGGTGTGTGGCATCACAGCCAGCTAATTTTTTGTATTTTCTATAGAGGCGGGGTCTTGCTCTATTGTCCAGGCTGGTCTTGAACTCCTGGGCCCAAGTGATCCCCCCTGACTCAGCCTCCCAAAGGTCTGGGATTACAGGCATGAGGCACCGCACCTGGCCTGTTTTGTTTTTAATGATGACATGTGCGATGTCAAGAATCCCTAATGAGGACAATCATGTAAACCATTACTTTGAACATAACTATCAAATTAGGTATAATCTACTCATATGCTGATTGACGGCGGGCATTAACAATTCACAGTGTCATCCAGTTTCAGAACCACCAGGGTTCTGAGGCCAGCCCCTTTGCTCCTTGGAAGGGGCATGGAGACGCAGAGAGGATAAGGAGCTGGATCCAGGTCAGGGGGTGGTGCTGGAGCTTAAACCCTGTGCTCTGTCCATCTGGTCACCTGATGCCTTCACTGGACTTCAAGCAGCCTTGCCCTTGGCCTTGCTGATAAACTTCTCCTGAGGAGTCAGGAGACAATAGGCACAGACCCCTAAGGTGCTGACCATAGGCCACAGCCTTCAGAGAGCTGGTGAGGGGACCACACCAGGCGCGCCGGGCTCCTGCGAAGGGCCATCCTAGCAACGGTGAGGCCCAACAGAACAGCCTCAGAAACTGCCAGGCTCCCCATCATAAATCCTGTGTGGCTCAGAAACTGCCAGGCTCCCCATCATAAATCCTGTGTGGCTACAAATGGTGACAGAATGAGAATTCAAGGAAATGGAAAGAGACCAATTGCCCTGTTGGGAAAACCATCGCAGGAGGAAGAGGAAGTGTGCGTACCGGGCGGAAGTGCTCCTTGTCGTATGTGCTGTGTGTGCCGCGCCTTGCTGAGCAGGGAGGCTTGGGATCCCCTCTGGGATCTGCCCCCACTGGCCTCTGGCCGCTCCCTCTGCCAGTGCTCCAGCCTGGCCAGGCTTTCCGTTGCTGGAATCTTCCACACGCCCCCTGCCTCCAGGCCTGCATCCTTTCTGCCGACAGCATGCCTCTTCTCCCCCTCTGGGTCCCCAACTCTGCTAACTAATTTTTCTACAGAGATTTTATTTTAGATGCCCTTTCCTCCACGAGATACTCAGATCTGTTTTCACACAGAAGGCGTGCATTTGTCCTGCTTGTTTTCTCTATGCCAGCTTGGAGTGGCCGCTAACTCGTCTTTGTCCTTCACTCTCAG
Seq C2 exon
GTGACAGACCATGCCACCACTGCCCTGCTCCACTATCAGCTGCCCCAGATGCCGGATGTCGTGGTCCGATCCTTCATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000160563-MED27:NM_004269:6
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF115713=Med27=FE(14.9=100)
A:
NA
C2:
PF115713=Med27=FE(28.7=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)