HsaINT0114197 @ hg19
Intron Retention
Gene
ENSG00000157064 | NMNAT2
Description
nicotinamide nucleotide adenylyltransferase 2 [Source:HGNC Symbol;Acc:16789]
Coordinates
chr1:183217379-183230204:-
Coord C1 exon
chr1:183230137-183230204
Coord A exon
chr1:183221879-183230136
Coord C2 exon
chr1:183217379-183221878
Length
8258 bp
Sequences
Splice sites
5' ss Seq
CAGGTATGT
5' ss Score
9.8
3' ss Seq
TGTCATCTCTTCTTGTGCAGGCT
3' ss Score
10.04
Exon sequences
Seq C1 exon
AACAACATCATGGTGGTGAAGGATGACATCAACCATCCCATGTCTGTTGTCAGCTCAACCAAGAGCAG
Seq A exon
GTATGTTTGACAAATGGCCAGAGAGACTTTAGTCAAACTGTCTTATAAGTCTCCACATAAATTTCCTCCATCAAAGATGACCCTAAGATTCAGGCAGACATCTGCTGCCCTGGTGTTTAGCTTCCTGTTTGGACCTCATTTGTTCACAGCCATTTTACATTTTTTTTTTTTTTTTTTTTTTTGAGACAGCGTCTCACTCTTGTTGCCCAGGCTGGAGTTCAATGGCGCAATCTCAGCTCACTGCAACCCCCGCCTCCTGGGTTCAAGCAATTCTCCTACCTCTGCCTCCCGAGTAGCTGGGATTATAGGCACATGCTACTATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGATTTCACCATTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGAGAATACAGGTGTGAGCCACTGTGCCCGGCCCCAGCCATTTACTTTTAAAAGGGAGGACAGTCCATTAGCTAGTCTTAGATGCTTTAAAGGGGAGAACAGGGTGTTTTCAGTTGTGGACTCTAGTTGGAGGTACTTATGGAATAATATTTGACAAGGGTACAGGCTAAGCTGCCAAAACAAAAAAAATTCCAATATTCAGAATTTTAAATGTTAGATGTTTAGTTCCCTCTTACTGAAGTCAAAGATGGAATCTATGGCCTCATCCATATGAAGCTTCCATCTCTGGGTGCACAGCTGCTGCAACAGTGGCTCTTCTCAGCCAGTGGAAAAAGGCAAAGTGAAGCCCATGGCAAGAAGCTTTGTCTTTAAGGTGACCCAGAGTTGCGCATACCACTTCCCTTTGCATCACACTGGCTCAAGGGTGGAGGACGGCTGGGAAATAGACTTTGTAGCTAGGCAGCCACATGCCCAGATAAAACTCAGGATGCTCTATTACTAACCCAAAGAAGGAAAGAATGGGTATTAGGGGCCAGTTACCAGTTTCTACCACAAACCCAAAGTGGAAATGTTGAGTGGAATGGTGAAATACACGGAATATAGAGGCTTAGAAGTGTAAAACTGAAAGCCACGAACACGTAAGTGTCAGTTAAAATTCTAGGTGTGGACAGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGTCCGAGGCAGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCCACTAAAAATACAAAAAATCAGCCGGGCGTGGTGGCAGCCGCCTGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTTCAGCCTGGGTGACAGAGTGAGACCCCATCACACACACACACAAAAAAATTATAGGTGTGGACAAGCTCACAGAAAGAGTCAAGAAGAGAAGACTATGGGGAACATTGCAAACATTTTAGCATTTAATAGAAAGTTAAAAGGCAGTTAGAAACCACTGGACCACCGGCAGTGGTGGCCCAGAAGCCAAGGTGAGAGAGGGGACAAAGATGGAGAGCATTGCCATCTGTGTCACATCTTTCAGAGAAATCAAATGAGACCAGGACTTTAAAAAGTAATTGCCTTCTTCCCTGGAAGGCAATTACAGAGACACTCACAAGGGTAACATCCACTGTGAGGTGAGGGCAGAAGCAATGGGCAATAAGCGGAGAGGGGCAGCATGTGGTTCCAAACATGGCTGCACATTAGAGTCGCCATGCAGAGTTACACAACAGTACAAATTCCTGTGTCCTGCCCAGTCCCACTGAGTCAGAATATATGGGGGGTGGGCTTAGGAATCTGCTTCAGAGCCACAGGTATACACACTTTTTCAAAAACTATGTGAGGAGGCACTTAGGGACCTAGCTTGCAAGGTCAGGGTGTAACCACCCAAGGGGTTCACCTTGCTCGCTGCCTAGACAGAGCAGATTCATCAAGACAGGGGAATTGCAATAGAGAAAGAGTAATTCACGCAGAGCCGGCTGTGCGGGAGACCAGAGTTTTATTGTTATCAAATCAGTCTCCCTGAGCATTTCGGGAGCAGAGTTTTTAAGGAAAACTTCATGGGTTGGGGAAGCCAGTGAGCCAGGAGTGCGGATTGGTCAGAGATGAAATCACAGGGAGTCGAAGCTGTCTTCTTGCACTGAGTCAGTTCCTGGGTGGGGGGCCGCAAATTCAAATAAGCCAGTTTATTGATCTGGGTGGTGCCAGCTGGTCCATCAAGTGCAGGGTCTACAAAATATTGCAAACACTGATCTTAGGAGCAGTTTAGGGAGGGTCAGATCTTGTAGCCTTCAGCTGCATGACTCCTAAACCGTAATTTCTAACCTTGTGGCTAATGTTAGTCCTACAAAGTCAATCTAGTCCCTAGGCAAGAAGGAGGTCTGCTTTGGGAAAGGGCTGTTGTCCTCTTTTTTAAACTATAAACTAAGTTTCTCCCAAACTATAAACTATAAACTAAGTTTCTCCTGAAGTTAGTTCAGCCTACACCAGGAACAAGGACAGCTTGGAGGTTAGAAGCAAGATGGAGTCGGTTAAGTTAGATCTCTTTCACTGCCTCAGTCATAATTTTGCAAAGGTGGTTTCAAGGGCAGTGCATGCATTGAAAGGCAGTGAGCTGGTCTCCAGTGAGATCTCACAGGCAGGGCTCAGATGCCTTTTAGAATCTACGTATGTGGAGGCGTATATGAATTTTTACAAATAGTTCGTTTGGGTCTGACACCTAGACTATTGTGTTAGGAGAGAACAGGAAGTAGGCAGACCAAGGCTGGAAAAAAACTGTGCAGAAGCCAAAATGTGTCACTGGAGTCCTTTATACCTGTTGGTGCCTCTCCTCCATGGGCTCCTGTAGGAAGGAAAAGATGCAGTGAATCCCAAAAATCCCTGGAAGAGAATTCATACTCTTGAGGCCAGCATGCAGAGGAACCCAAAAGGATAAACTAAGGATAGTTCTAAGAGGAAAGCTTCTAACAATAATTGCTCCCATTAAAACAGAAGAAAGACCCCAAATAAATTGCCTAGCATTATGCCTTAAGGAACTAGAAAAAGAAGAACAAACTAAACCCAAAGGAAGGAAATAATAAAGATTAGAGCAAAACTAAATAGAGAATAGAAAAACCATAGAAAAAATTAATAAAATGAAGAGTTGGTTTTTTGAAAAAAAAAAACAAAATTGACAAACCTTTATCTAGACTGAAAAAAAGACTCAAATATATAAAATCAGAAATGAAAGTGTAGACATTATAACAGATGTCTCAGAAATAAGATGGATCATAAGGAATTATTATGAACAATTATATGCAAACAAATTTGGTAACCTAGAGGGCAGGGATAAATTCCTTTAAAAAGATAATCTGGCAAGATTGAATCAGGAATAGCCTGAACAGACCAATAACAAATAGATTGAAGTAGTAATTAAAAACTTCCCAACAAAGAAAAGCCCAGGACCAGATGACTTCAGAGCTGAATTCTACCAAATTTTCAAAGAATAATTAATACCAATACTTCTTTTTTTAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATAGCGTGATCTTGGCTCACTGCAACCTCCGCGTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCTGCCACCACACCCAGCTAATTTTTGTATTTTTGGTAGAGACAGGGTTTTACTATGTTGGCCAGGCTGGTCTTGAACTCCTGAGCTTGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGTATTACAGGCATGAACCACTACGCCTGGCCTATACATTTTAAACTCTTCAAAGAAATACAGCTGGAAGGAATACCTCCTAGCACATTCTACGAGGCCAGCATCGCCTTTGATACCTAAGCCAGATAAAGACACCAAAGAGGCCAGGCACAGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCAGATCGATCACTTGAGGTCAGGAGTTCAAGATGAGTCTGGCTAATATGGTTAAACCCCATCTCTACTAAAAATACAAAAATTATCCAGGCATGGTGGCACGTGACTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCACTTGAACCCAGAAGGCAGAGGTTGCAGTGAACTGAGATCATGCGCTGCTGCACTCCAGCCTGGGCAACAGAAAAAAAAAGACACCACAAGAAAAGAAAACTGTAGGCCAATATTTCTGATGAGCATTGATGTAAAAGTCCTCAATAAAACATTAGCAAATTGAATTCAACAACACAACATGAAGCTTATACATGATGATCAAGTAGGATTTATCCCTGGCACACAAGGCTGGTTTAACATATGCAAATCAGTCAGTGTGATACATCACATAAATAGACTGAAAGATAAAACCACATGACCATATCAATTGATGCAGATAAAGCATTGGACAAAGTTCAACATCCTTTCTTGATAAAGATTCTTAACAGTTTAAATATAGAAGGAAAGTTTCTCAACATAACGAAGGCCATTTTTTAAATTTTTTAATTTTTTTATTATTTTTTTTGAGATGGAGTCTGGTTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCTGCTCACTGCAACCTCCGCCTCCTGGGTTCACGTGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGCACACACTACCATGCCCAGCTAATTTTTTGTGTATTTTTGGTAGAGACAGGGTTTCGCTATGTTGGCCAGACTGGGCTCGAACGCCTGACCTCGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACACGCGTGAGCCACCACTCCCGGCAAGGCAATTTATTTTATTTTTTTTAAAAAACCCACAGCTAACATTATAATCAATGGGGAGAAAATGAAAGCTTTTCCTCTAAGACCTGATATAAAGCAAGAATGCCCACTATTCCCACTTCCATTCAGCAAAGTACTGAAAGTACTATCAATAGCAGTTAGACAGCCAGGCACGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCGGAGGCAGGTGGATCACTTGAGGTTAGGAGTTAGAGACCAGTCTGGCCAATATGGTGAAACCCTGTCTCTAACAGAAATACAAAAATTAGCTGGGCATTGTGGCTTGTGCCTGTAATCCGAGCTACTCGGGAGGCCGAGGTAGGAGAATCACTTGAACCCAGGAGGCTGAGGTTGCAGTGAGTCAAGATCACACCATTGCATGCCTGCCTGGGTGACAGAGTGAGACTCTGTCTGAAAAAAAAAAAAAAAAAAACCCTTAGGAATAAATTTAACAAAGGAAGTGAAAAATCTGTACACTGGAGTATATATAAAACATGGACAAAAGAAATTGAAGACAACACAAATAAATGAAAAGTATTTCATGCTCATGGATCAGAAAAGTTAATATTGCTAAAATGTCCATGCTACCTAAAGAAATATAAAGATTTAATGAAATACCTATCAAAATCCCAATGGCAGCATTCATACTTCACAGAAATAGAAAAATCAACCCTAAAATGTGCTCAGAACTGCAAAAGACCCTGAATAGCCAAAGCAATTATGAGAAAAAAAAAGTTGGAGGCATCACACTTCTTCATTTAAAATTATATTACAAAGCTGTAGTAATCAAAACAGTATGGTACTGGCATAAAAGCAGACACATAGAGCAGTGGAACCGAATAGTGAGCCCAGAAATAAATTCAAACATATATGGTCAACTGATTTTTGACAAAGGTACCAAAAAAGCACAATAAAGAGAGGACAGTCTCTTCAATAGATGGTGCTGGAAAAACTGGATTTCTACAGGCAAAAGAATGAAATTGGACCTTATCTCACACCAGTCACAAAAATCAGCTCAAAATGGATAAAGAACCTAAGTGTAAGATCTGAAACAGTAAACAAAAACAGAAGAAAACATAAAGGAAAATCTCCTTGACATTGGTCTTGGCAATTATGTCTTGGATGCCACACTGAAAGCACAGGCTACAAAAGCAAATAAATAAATAAATGGGACTTCAAACTAAAAAGCTTCTGTACAGCAAAGGAAACAACCAACAAAATGAAAAGGCAACCTAGGGATTGAGAAAAAATATTTTCAAATCATATATCAGATAGGGATTAATATCCAAGATTTATAAAGAACTTACACAACTCAAAATAGCAAGAAAACATATTACTCAACTAAAAACTGGGCAAAGGGGCACAGTGTGATGGCTCATACCTATAATCCCAGCACGCTGGGAGGCTGAGGTGGAAAGATTGCCTGAGGCCAGGAGTTCCAGACATAGTGAGACCCTGTCTCTATCCTTACCCCTTCCCACCAAAAAAAAATTAGCCAGGCATGGTAGCATGTGCCTGAAGTCTTAGCTGCTTGAGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCTCCAGTGAGCCATGACTCACTACTGCACTCCAGCCTGGGCAACAGAGTGAGACCCTGTCTCTCTCAAAAAGCAAACAAACAAACAAACAAACAAACAAAACACCAGAAGATTTGAGTAGACATCTCTCCAGAGATGACATAAAAATTGCTAACAGGTGCATAAAAAGATGCGCAACATTACTAATCACCAGGGAAATAAAAATTAAAGGCATTATGAGATTCTACCTCACACCTATTAGAATAGCTATTATCAAAAAGATAAGAGATAACAAATGTCGATGAGGGTGTGGAGAAAGGGAACCCTTGTACACTGTTGGTGGGAATGTAGATTGGTACAACCGTTATAGAAAACAGAATAGAGGTTCCTAAAGAGATTAAAAACGGAACTGTCATATGACCCAGCAATCCCTCTTCTGGGTATATACCCAAAGAAAATGAAATCACCACCTTGTAAAGGTATCTGCATTTCCAAGTTCATTGTAGCATTATTCACAGTAGCCAAGATGTGGAAACAACCTAGACGTCCATCAATGGATGAATAGATAAAGAAAATGTGTTCTTACACACACACATACACACACACACACACACACACACACACACACACACACACGGAAGTGGAACATTATTCGACTTAAAAAAGGAGATCCTACCACTTGCCACAACTTGGCTAGACCTGGAAGACATTCTGCCAAGTGACATAAGCCAGACACAGAAATAAAAATATTGCATGATTTCACTTATATGTGGAATCTTAAATACACAGATAGAGAATAAAACAATGATTACCAGGGTCAAGTGTGGAGGGCTGAAAGTGGGGAGATATAGATCAAAGGATACAAAGCAGCAAATATGTAGGAATATATATGGAATCTTAAACATACAGATAGAGAATAAAACATGATTACCAGGGTCAAGTGTGGAGGGCAGAAAGTGGTGAGATACAGGTCAAAGGATACAAAGTAGCAAATATGTAGGACAAACAAGTTGAAAGATCTAATGTGTGACATGAGGATGACAGCTAATAATAGTGTATTATATTTAGGGTTTTTGCTAAATTAGTAGATTATAGCTATTCTCGCCACAAGAAGAACAAATACATATCTGAGTGAGATGATGGATATATGAATATTAATTTGGTCCACTACAGTAACCATTAAACTATATTATATAAATAATATAATATTAACACTTATATAAATAATATAATATAATATAATATTAACACTATTATATAAATAATATAATATAGTATAATATATAAATTATAAAATATATAATAAATATGTAATATAACATAGATATACTATATTATATGATGATAATATATGTGTATCTTACAACATCAGATTGTATGACTTAAATATACACAATACAATTTATTTGAGAAAAAAGAATAGTGAATACATTAGATGCCCACTGTGTGTCTGGCACTCTTCTAAGTGCTTTGCATAATGACTCATTTAATCCTTTGAATAACTAAATGAGAGGGGCCCAGATATTACCCTCATTTTACAGGAAAAAAACTGAAGAACAGAGGGGCTTAAATAACTTTCCCAAGGCCTCTCACCTAGGAAGTGGCAGAACCACGATGAATGATGTCACCAAGGTGGGGAAGGAGTTGTGGAGGCAAGAGGGCCTTTCCTAATACAGAACTATTTACTCAACCTGAGAAAAGGCTACAAATGGGGTGCTGGGGAGACAGGGGCATGCCAGTCCTCCTGACTTGCTTTGGGTGTGGATGTCCATCTGATTGTCATCTCTTCTTGTGCAG
Seq C2 exon
GCTGGCCCTGCAGCATGGGGACGGCCATGTTGTGGATTACCTGTCCCAGCCGGTCATCGACTACATCCTCAAAAGCCAGCTGTACATCAATGCCTCCGGCTAGCAGCCCCTCGTCCTCCGGCAACACAATGGCCCCTCCATCTTTGTCAGCCCCCTGTTTCTCTCCTGCCTCTCTGTTTCTCCATCTCCTCGTCTTGACTGTTTTCCCTACTTGCTGACTTAACCCCCCATAGTGTGGGGGACCTGCAGAGAACCATGGCATTCCCTATTCCACAGTCATCTTTGGACAGACTTTCCTCTAGTCTCCGGGTTGGGGGTGGGTGAGGGAATGGGGTGGGAGTCGGGGGAAGTGCAGTCCTTGGAGATGTACTGGTGTCCGTCTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCATCCTCCCAGCACGCTCTGGGGAGGCGGCTCTGGTGCCCATCCTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCCTCCTCCCAGCATGCTCTGGGGAGGCGGCTCTGGCTCTTGCCTTCCCAGCATGCCCTTTACTACAAAGGGCTATTTTTCTTTTCTTTCTTTTGTTTATTTATTTTTCTTTGTTCACTCCCTGTAGAACTTGGATGAAATCAGTGTCCATGGTTCTTTATGTTTGTAGTCTTGATGTGCTCCTGTGGTATTACTTCCCCTCTGATAGGACATTGTAGCCAGCCTCAGCACTCAGTGAGTTCATCAGGGCCACACCCAGTAGAGAAGGCCAAGCAACCTCCACTTCTTCAGCACCACACACACGCACACACACACACACGCACACATGCGTGTGCACCCGCGCACGCACATACACACACACATATAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAACCTTTGATCAGGAGTGAGATTTTCGGGTTCTGAAACCTGGGACACGAGTCTGTGAATAGTCGGTTTTCTCAGAATAATTTGAATCTGTTTTCTTAGTTTCAAATGACCATTTCCCTGATGCTCTGAGCTTATGATCACACAGAGCCAGTCCATCCTCATTTCCTGGTGGCATCTGTTCATTTACCTTTGTGGACTGTAGCTGATGGCACAGTGCGGGTTCCCTACCAGCCAGGGGTTTCCAAGGGACCTTTGGAGGCCATGCTTAGACACATTCCTGTACCTGAGAACAACCACATAGGCAGGACCAGATCCACATCGTGCAGTCGTGTCATAAAAAAACAAAACAAAACAAAAAAACACTAGGAGTCCACTCAACCCTGGAGGTCTTTGCTAATTGGAATTATGTATTGTCTGTTGGGCTGGGAAATGTCTCTTTCATATTGTAAGTCCAGGATGAACTAGGAGAAAGCAATTTGTTGCCCTGATGATAACTGATGATTTTCACCCTCTCTAGCTGAGGTAACTCAGACAGTGCATGAGGTCAGTTTCTTCTTGAGAAGCAGTGCCTTGGTCTTGTTTCTGTGGTTGGTTCTAGCCCCTGCAGAGCCTGGGAGCTGCAGGAACTGTCTGAGAAAATCTCCCTAATAGGGGAGTGGGTTCCCAGAAGGGAGATCTGGGAGGGGTCAGGAGCCACTAAGTTGCTTCACTCCTTTTTTCTCTAATTTTCTACCTTCCTCTCTGTTCCTGCAGACAGTTTTGCCAGCTTTGCTTCTGGTTACTAGGGTCTCATGCGTGTCCTGCTTGGAGAGCCATAAGGAAATTGCTGTCTTGTGCTTTGTGTCTCTCATCCAGTCTCTGGCTCTTGGGATTCTGGTCTTTGAGAAATAGTCCCTGAGTATTAGGATACTTTTATCAAAATCTAGTACCAGCTACGGCCAGAAAGGGCCAGGTGGGACCTGAAAGCAAAGACAATGTTCTTTACCACACGTTTCACATCTGCAACATCCTTCAATTGCGGGAAAAGGAACTTGATTTAACAGAAGAACATGGTAGAGCAGCATCCAGAAAGTCTGTTATTCCTCTTGGATTTTTTGAAATAATCTTCAGAGGAAGGAAGGAAAATCCTATTTTGGGGTATCAGTGTTTGACTAGGGATCATGAAATAATAAACTGAAAAAAACTTTAGAGTTCAGTTGATCCAACACTTTCCTTTAAAAGTTGAGGGAGCAGAGGCCCATGGGATTAAATGGCTGGTCCAGGTCAGCCAGCAGGTGTAGGGCCTGACAAGAACATATTGTTTCCCTGACCCCTAGGCCGTCACACCACACCCTCCATTTCCTCATGTTGCTGACCAGGTGCCCATATGATTTCTACACTTCCCAAGCCTTACCCTGGCATCTTTCTTTTAAATTATATCTGTCCCAGGTGCTCTCCACACATAGGATGGTAATGCCAGTCCCAGGGGAGGGTGTGATAGTAAGGAAGGCCACTGTTAGGTTTCCTTTAGAAATAAAGAGATCTCAGCAGCTTGGAAGAAATCCCAGAAGCGGACTCCATCAATCCAAGAAAGAGTTGCTTTGTGGAAGGTGAAGGAAGACCCACAGAGTGCTCAGGATGATGCTATTGCTGGAGAGCGAAAGATGGAACAGCCTTGTCCAGGCAGAACAGTCATAAGCCAGGAAATGAAACAAAGGAAAACAGGTGCCTGAATTTCCTGGGGAAACATGGCTTGTTTAAGGACTTGGAGTTATGGATGGAATTTATGGGACCCACGTGAGCAGACCTGAGGAAGGCTCGATTTCTTTTGTTTCTTGGTCCACTCTGTCACTCTGCTCTGGTCAAGCCCCATTTGGTCTACAGCCCATGAGAAGGAATGAGGCTGGTTCTGCACTCTCAGCATGCAGTCCGAAAGCATGTGGGAGTGGGGAGGGAAAGTGAGATGAATTAAGACAAAGAACAGGTGCCATAGAAGTAGATTTCTAGGAATGAAGTGGGGCAGATCTTATCTTTGTGGATTACAGGCACTGTACTAAAAACAGGTTTCCTATTTAATATAAAAAGAAAGTGAATCTTCTTTTGGATAGAATCATCCATTCCCATCGCCGCACCCCCTACCCCCCAAACACACACACACACACACACACACACACACACACACACACACACACACACGCCCTACTCTTCATTTGCTAGGGGAAGGTCACAGCACAACTAAATCCAGGACAGGACATTGTGACCATGACCCAGCCACAGTCAATACCAGAAAGATGATTCAGAGTCTGAAGTGGTGCCCCAGGTGCCAACAGGATAACCTCTACCCCCCGACTTTGTCTCTGGGGTCCTGTTCCTTCCTGCAAAGCCCAATCCAAGACTGGCATGGCTCAGAGGTTGTGAGAAAGGCATGGACTGGAACAATCATGTCCAGAGGGGTCTGGAGCTTTGTTTCCTGTTCACCAGCAAAAAATGTCTCTCCCATTTTTCTGAAAGTGGCTGATGTAAGAACAGGCAGAAGGAAAACCCTTTTTGTCAATAACTCTGTCCTTAAGGAATGGTCCTCTGGGAGGGCTGTGCTGCTAGTGGGTACCTCAGTCACACACCCCCAACCCCAGGCAGCCTCTAGAGCCTTCTTGCTTTCATTTTCCTTGAATGTACATAGGAACAAGGGGGAAAGTCTCTTACTGAAGTGCCTGAAACCCAAAGCTAGAGCTTCTAGAGACGCCGTTCTTCCTGTCTCAGCTTGGCCAGCCTTTCAACAATGTTCTCTAGTTTCAAGCTCCAGCTTCTCAGAAAGAATTAAAGAACTTGCTGTTCAAATTAAGTAGAAAGTGAGACTCAATAATAACTGAACTACAGCAAAAGGCAGAGAATTACAGGGAGAAAAAACTTGTACTTACCAGCCCAATTCTACTCTCCTCAAACTGACACACACACACACACACACACACACACACACACACACACACTCTTTTAGGGGACTAAGAGAGAGAAGCATGTTATTACATTTTACTCATCCAAACAGTAATGCAAAAATAAAACGGTAGAATATGAAAAGCTCAGGATCTCTCCCAAGGCTACCTACTGCAGGAGGGCCAACAGGTGAGATGGGAAGAATGGAAACAGGGACCGATTTTGTAGCTCATACAATTAGGACACCTTAGGAATAGCATTGTAGTAATGGTGATGAATATGCTCTGCCAAATTCATCCAGTCTGCACCATCTTATAGCTGCCCAGCACACTCGACTGTTCATGTGGTCTCTTTGTAGTGTGAGTTTGGAGTGTCCTATTAGCCTGTTCTGGTTAGGAATGAGTTAACGGCTCTTTCCCTCAACCTTAGTCTAGTCCCAGGGCTGAGGATTCAGCTGGATCCACATGGTCTTGAGGGTTGGCATGAGGAGGGGGAAGCTTTTTTGAATCGCTTTTTGATCACATAATCTGCCATTTTAAGAGTAAGATTTGCTTTATGGAAATCAATTCATTAATAAAAAATGATATTCAAGTTGCAATACCATTTCACAGTGAAATATTTTGAGTACAATTTTGTTGCTAGAATAGTCATGGGCAAGAGTTTTATGCAAAATGTTTCAATTATGTTAATAAATAAGACAATGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000157064-NMNAT2:NM_170706:10
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0146721=CTP_transf_2=FE(8.3=100)
A:
NA
C2:
PF0146721=CTP_transf_2=PD(0.8=5.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)