HsaINT0122177 @ hg19
Intron Retention
Gene
ENSG00000133256 | PDE6B
Description
phosphodiesterase 6B, cGMP-specific, rod, beta [Source:HGNC Symbol;Acc:8786]
Coordinates
chr4:629669-647781:+
Coord C1 exon
chr4:629669-629758
Coord A exon
chr4:629759-647640
Coord C2 exon
chr4:647641-647781
Length
17882 bp
Sequences
Splice sites
5' ss Seq
CAGGTACCC
5' ss Score
8.63
3' ss Seq
AGGTGTGCCCCTCCCTCCAGGTG
3' ss Score
11.36
Exon sequences
Seq C1 exon
GTGTTCTTGAAGTACCTGAATTTTGCCACGTTGTACCTGAAGATCTATCACCTGAGCTACCTCCACAACTGCGAGACGCGCCGCGGCCAG
Seq A exon
GTACCCACACGCTGAGCACAGCTCTGCCCACGAGGGCCAGGGTCCCTCCGCCCATCTCGCTGCCTGCACAGAGGCGGGTGGTGGCAGGTGGTCTTGTGCTCACCTGGGTAGGTCCTGGGGTGGGCATTGCTCAGGGGAGAGGAGGGCTCCATGGCTTCTGTGGCTGTGCTGAGCTGCAATGGCCAGACCCATCTGCCACCTGCCTGCCATCTGGCCAGAGTGGGTGTGAGGCACCTGCAGAGGGGGAAAGGGGCACCTTTCCTAGAGGCTGCCCCCAACCTCCTTGGGAGAAGCCAGTATGAGTGACGAGTGAGCAGGGAGCAGAGGGGCTCCCTGGCAGGTCCAGCCCTGGTTGAGAGAGGGTGCAGGGGCAGGTCCGGCCCTGACTGAGAGAGGGTGTAGGGGCAGGTCCGGCCCTGGCTGAGAGAGGGTACGGGGGCAGGTCTGGCCCTGGCCGAGACGCTGGGGAGGGAGGCCTGAGGACCTTAAGGAGTCAGGTGTGCCGAGGTGCGTGGGAAAACGCAGGGGGATGACCTCCAGGGCAGGTGGTCCTCCCGTCTGAGACCCTGGCTCAGGGGAGACCTGGATGGATAGTGAGTGGGCTGGGGGAGGGAGGCTCTATGTTGGGGCTGGGAAGCCGTCCATGCAATGGCCTGGGGGCTGAGCCACAAAGGAGAACTGTGAAGACGGCGGTCACCTCCTGCCTTCTCCGTGTCTTGTTCTGCCTGCGGATGCTGCCTGGCCCTGGTCACCTGCTGCGAGCCTGCTGAACGTGGCGAGAGGCTGAGGTCTTTATCTCAGCATCTGGAGGAAGGCTGGGTTTAGGGGCCTCCTCCTGGCCCCAGGGCTGCCTCAGGGGCAGTCTGGAAAGGCGGTCAGGGCCCCTGGGGCATCCAGCCATCCAGCCAGTGGACACCTGTGAGAAAACCCCCCGGAGGGAAGTCTCAGCCCCAATCCAAGCAGGCCTCTCACGGCCAGGGCCGTGGGAACCAGGGACCAGGGAGAGCATCTGTGTAATGTATCTGGAATTCTTTTGCGTGAGAGATTTGTCTCTTCTCCTCATTTACTAATTTATTCAATCATTTATTTATGTCAGTGTGGACTTATGAGTATTGTATGCTTAGGTTATAATTCAATATGATTTTATTTATTTTCTTGCTCACGTGAGTCCAGCTTTGGCCACTGGAAGCTCTTTTACTTGGCTTCTGTGCCCTTTTTACGTGACCCCATCACTGTGGGGTTTTGCTTTGCTTTGTTTTTTGTTTTTTTTTTTATGTTTTTGGTTTTTGTTTTGTTTTGTTTTTGAGACAGGGTCCATCTGGGCTCGCTACAACCTCTGCCCCCCCGGTTCAAACGATTTCCTGCCTCAGCCTCCCGAGTAGCTGGGATCACAGACATGTGCCTCCAGGCCTGGCTAATTTTTGTATTTCTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCCAACTTCTGACCTCAAGTGATCTGCCCACCTCAGCCTCCCAGAGTGCTGGGATTACTGGTTTGAGGCACCGCACCGAGCCTGGCTTGGTTTTGAAATGGATGCCCCTGTCTCATTGTGTATTTCCTGCCCTGGTCTTGCCATCAGCCACTTCTCCAGGGAGCCTGGTTCCTTCTGTTGGAAAGCAGTAACAGGAGCCGCGGCCTGGGGGCCGGCTGTGCTTGTTGCCGGGGTCACTGCTTCCAGGCCCTCTCGTCCGGCACAGCGAGAGGCAGCCGTGCTCTGCCAGCCCTCGCTCGTCCCCTGCGTGTGCGCAGAGCTGCAAATGTTCCTGCACGTGACCATCGCGCTCGAGCTGACGTCTCCAACCCTGGTCCACGACAGCGCGACACATTCTGGCTTCTTCCTCTTGCTGCTGTGTGAATTCCCATGCAACAGTGGGATGCCTGGGAGCTGTCCTCCGCACAGGCACTTAATTGTCTGATACCAGCGCAGGGGAATAGCCGCGTCAGGACTGTTCACCCACACCCCGTGGAGAACAGTGTTATCAAGTAGAATACGGGGTTGATGAAGAGTTTCTTTTGCCTTCAGTCTTACTGAGGCCAGAAGGCGGCTTGCTCTGTTCCTTCCTGCCAGTGACGAGTGAGCGTTCCTGCTGCTCTGCACCCTCACCAGCGTTTGGTGGAACTGTAGTCTGATGGGTGTATGGTAGCATCTCATTATTGCTGTAATTTACAATCCCCTAATGACAGATGATGTCGCACGTCTATTCATTTACATATTTGCCATCTGTACATCTTAATCTTTGGTGAGGTGTCTGTTCAGATCTTTTGCCCTGTTTGATGGGGTTGTGTTCTTAGCATTTGAAGAGTTTTGTTTTTATTTTATTTATTTATTTATTGGAGACAGGGTCTTACTCTTGTCATTCAGGTGGAGTGCAATAGTGAAATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCAGCTAGTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAATGATCCTCCTGCCTCGGCCTCCTAAAGTGCTGTGATTACAAGTGTAAGCCACTGCACCCAACCAGAGTTTTTAAATATATTTTCAACACAAGTCCTTTATCAGATATGTTTGCTTTGAGAGCTTCTTGCTAAATTGGGGTCCCATTGAGGGCCCCAATGAGGGTCCCAGTAATGAGGGGTCCTCGTTACCCTAGCAGGTAATGAGGGGGGCTGGGCCTGGTGTTTATCCTGCACCTTTCACAGGATCTTCTTTCATTCAGTGGGCAGCCTCGTGCCTAATTATCCAGCCCTCAACCAGGGGCTCACTCACACAGGAAACTTGTTCATATTGGCAGGTGCCTGAGGCTTGTGTCTGACCCATGCCCAGGTCATGCCTACCTGGCCATCGCTCTGGCACAGGGAGCCCAACCCTCTGTTCCCTCCAGGGTCCCAGGGAAAAGCTGGCCTGGGGTAGCTCCTAGCTCTTCAGATGGAAGCACAAATTCAGTCCACCACTGTGATAGGAAACACGTGCAAAGATTTTTACTACAGGTCCTGGGCAGGAAAGGCACCGTGATTCTGGAGGGCAGTTTTGTTTTTTTGGGGGGTGTTTTTTTTTTTCTTGAGACAAGGCCTCACTCTGCTGCCCAGGCTGGAGTGCGGTGGTGCAATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAACAGATCCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGTGCACCCCACCACACCTGGGTAATTATTTTTTTTTTAGAGACAGGGTCTTGCTGTGTTGCCCAGGATGGCAGAAGGGCAGTTCTGTGATGTTTTTCTTGGGGTCCACAGTTCACAGGAGGCAGAAATGGCAAGTCAGGCAGAGCAGGGGCTCTGCTAGCAGCAAACATGAGGGAATAGAGAGCAGGTCCCTTAAGTTCATGGGCAAATGTCTGAACAGCCTTTTCTAAAGGAAAGGGGGAGAAGTGGGGAGCCCAGGCTTCTGGGCAGGAGAGATGCCTCTAAGTTCTTATGGCTGCCATCGGCTTGAGCCACTGAGGTGCAGAACTGGAAACTGTCAAGGGTGACTAAGCCCTGCTTCTGGCATGAGAAAGTTAAACTTGTATTCAAAAGTGATGCTGAGGCCGGGCACGGTGGCTCATGTCTGCAATCCCAGCACTTAGGGAGGCCGAGGCGGGCAGATCACCTGAGGTCAAGAGTTTGAGACCAGCCTGGGCAACACGGTGAAACCCTGTCTCTACTAAAATACAAAAAATTAGCCAGACATGGTGGCGCATGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGCTGGGTCTCCCCCTCAGGTCCTCCTCCCCAAGACCTGCAGTGAGCCGAGATCACCCCACTGTACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCCAAAAAAATAAAAAAAGTGATGCTGAGACCAGGAGCAGTGGCTCACCTCTACAGGCCCAGCACTTTGGAAGGCTGAGGTGGGAGAATCACTTGAGGCCAGGAATTTGAGATCAGCCTGGTCAATATAGTGAGACCCTATCTCTACAAAAAAAGAAGAGTGATTTGCAAATATTTTCTACCAAGATGTGGCTTGTCTTTTAACTCACTTTACACTGTATTTTGCAAAATAGTTTTAAATTTTATTATAATAAAGTCCAATTGGCCAGGCGTGGTGGCTCATGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCCAATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAGATGGTGAAACCCCATCTCTACTAAAAAAAATATGAAAATTAGCCAGGCATGGTGGCGGGCACCTGTAATCCCAGTTACTCAGGAGGCTGAGGCAAGAGAATCACTTGAACCTGGGAGACAGAGGTTGCAGTGAGCTGAGATCGCACCATTGCACCCCAGCCTGGACGACAGAGTGAGACTCCATCTTGGGAAAAAAAAAATCCAACTTAGCATTTTTTTTCCCTCATGGATTGTATTTTGTGTTGTATCTAAAAACTCATCACTAAACCCAAGGTCACCTACATTTTCTCTTATTGTCTGCTAGAGGTTGTATAGATTTGTATTTTACGTTAGATGTGTGATTCATTTTCTGAAAGGTGTGTAAGGACTGCATCTAGATTAATTTTTTGTGTTGTTGTTGGCATGTGGAAGTCCAGTTGATCCAGCACCATATGTAGAAAAAGCCTACCTTTTCTCCGTCGTATTGCTTTTGCTCTTTTGTCAAAGATCACCTGGCTCTGTTGGTGAGTCTATTCCTGAGCTCTTTATTCTGTTCCACTGTTGTATGTGTTTATTCATTCATGATACCAGACCATCTTGATCACTGTAGGTTTAGAGTAAGTCTTGAAGTTGGGAATGTCAGCGCTCTAGTTGTCTTTCTTCTGCAGTATTGTGCTAGCTATTCTGGGTTTGTTGCCTTTCCACATAAACCTTAAGAGTCAGTTTGTCAATATCCACAAAGTAGCTTACTGGTATTGTAATTGGGACTGTATTAAATCTGTAGATCAAGTTGGGAAAAATTGCCATCTTAGAAATAATGTATCTTCCAATTGATAAACACAGAATATCTCTTCATTTATTTAGATCTTTGATTCCTTTTATCAGAATTTTGCAGTTTCTGCATACAAATCCATAATTTTATTAGATTTGTACCTAAGTATTTCATTTTCCCATGGTAATGTAAGAGATATTGGGTTCTTAATTTCAAATTCCAATTCTTCATTGCTGTTATAAAGCAAAGCAATGGACCTTTGTATGTTAACTTTGTATCCTGGGCAGAGAAGAGGTGAGGGTGAGGCGGTCAGCGCAGGAGCCAGGTCAGGCTGGGCAGGGGGTCCCTGAGTGCCTGAGGCCTCACCTTCTCCTTGGTCATGTCCAGGGGGCTCACCAAGTACCGTCACAGCCACACTTTTAAAACCAAGGTCTATTGGGCTGTGCGGCAGGGGCAGGCCACCTAGGCGTCCCAGCTCCTGGGGGACCCATGAGGCCCTGACCACAGCCCCGCACACAGCCGTCAGAGACACACGTTTTTTGTTTTTTGTTTTTTGTTTTCTGAGACAGAGTCTCACTCTGTCACCCAAGCTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCGACTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGACTACTGATGTGCATCACCATGCCCACCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTAAACTCCTGACCTCAGGTGATCTGCCCACATCAGCCTCCCAAAGTGCTGGAATTACAGGCCTGAGCCACCATACCAAGCCAGGAGTTTTTTATTGATTATTGGTGTTTTTACCTAGACAATCATGTCATCTGCAAACAAAGATAGTTTTATTTCTTCCTTCTCAATCTATATACATTGTATTTCTTTTTCTTGCCTTATTGCACTAGCTAGGACTTCAAGTATAATGTTGAATGTGAGTGGTGAGAGGAGGGAGATATCTTTGCCTTATTCCCAATCTTAGGAGAAAGCATCCACTTTCTCACCATTAAGAATGACATCACCCAGCTGGGCATGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACCTGAGGTCGGGAGTTTGAGATCAGCCTGACCAACATGGAGAAAAACCCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGTGCATGCCTATAATTCCAGCTACTTGGGAGGCTGAGACAGGAAAATCGCTTGAACCTGGGAGGCAGAGGTTGTGGTGAGCCAAGATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGTAAACTCCGTCTGAAAAAAAACAAAACTAAACTAAAAAAAGAATGACATCACCCAGCATGGTGGCGCATGCCTATAATCCCAGCACTCCGGAAGGCTAAGGCAGGCAGATAGCTTGAGCCCAGGAGCTTGAGACCAGCCTGGGCAACATGGCGAAACACCATCTCTACAAAAAATGCAAAAAAGTTAGCCAGGTGTGGTGGTGTGTGCCAGCAGTCCCAGCAACTCGCCACTGCACTCCAACCTGGACAACAGACACTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAATGCCCTTAGCTCTAGGGTTTTTGTTGAATTTTTAAAATCCACTTGAGGAAGTTCTCTCTATTTCTAGTTTGCTAAGTGTTTTTATTCAGAATGAGTGTTGGATTTTTCAAATTTTTTTCTGCATTGATTGATAACATCATGTATTTTTTGAACAAATTGTGAACGAGCTTTGCATACCTGGAATAAATGCCACCTGGTCATGTAGTGTAATTATTATTTTCATACATTGTTAAATCGGTCTTGCCATGTTTTGTTAAGAATTTTGGCATCTATAAGCCGGGTGTGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGTTGAGGCGGGCGGATCACGAGGTCAAGAGATTGACACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATGCAAAAATTAGCTGGGTATGGTGGCAGACATCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAAGTGGAGGTTGCAGCGAGCCAAGATCATGCCACTGCACTCCAGCCAGGGAGACAGAGCGAGATTCCATCTCAAAAAAAGAAAAAAAAAAAGAATTTTTGCATCTATATTCATGAGCTACATTGGTCTGTAGTTTTTCTTTCTTATAATGTCTTTATCTGGTTTTGCTATTAGGATAATTTTGACCTCATTGAATGAGATAAGAGTGTTTCCTCTGCTTCTATTTTTTGGAAGGGATTGTAGTGAATTGACATAACATCTTTCCTAAATGTTTGGTCAGATTCACCAGTGAAACTATTAGGGACTGGTGCTTTCTTTTTGGATGATTATTAATTATTGATTCAATTTCTTTAATACTCAGAGAACTCTTCAGATTCTTCTAATTCTCCTGGTGTGAGTCTTGGTAGTTTGTGTCTTTCTAGTGATCAGTCTATTTCATCTAAGTTAAAATCAAATTTTGAGGCATAGAGTTGTCATAATATTTATTATTTATTTTCTTCTGCTTGCTTTAGGCTTAATTTGAAGTTCTTTTTCTAGTTTCTTAAGCTTTGAGTGTTGATTTAGATCTTTCTTCTTGTTTATTATGTGCATTCAATACTATAAATTTCCCTCCAAGCACTGCTTTCCCTGCACCTGACAAATTCTGACAGGTTGTATATTTTTATTCTTATTTAGTTCAAAATCTTTTTTTTTTTTTTTTTTTTTGAGGGAGTCTCGCTCTGTAGCCAGGCTGGAGTGCAGTGGTGGGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTACAGACACACACCACCACACCCAACTAATTTTTGCATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTCGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCCTAGTTCAAAATCTTTTAAAAGGTCTCTTCAGACTCTGGCCCATCTGTTATTTGGAAGTGTGTTGTTAAATCCATTTTAAATTTTTCAGCTATATTTCTGTTATTGATTTCTAATTTAATTGCACTATGGTATAAGAACATATTTTTCATTATTTTTATTTTCAAAATTTTGTTAAGATGTGTTTTATGGCCTAGAATGTGGTTTATCTTGCTGTATGCTCCACGTGACCTTGAGAAGAATGGGTATTGTGCTGTTGGTGGATGAGGTAAATTATAGATGTCAATTATGTCCATTCGAATAACAGTGTTTTTGTTTTTTTTATTTTTATTTTTTTGAGACAGATTCTTTCTCTGTTGCCCAGGCTGGAGCGCAGTGGTGTGATCTCAGCTCACTGCAACCTCCACCTCGTGGATTCAGGTGATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACACGCCACCACGCCCACCTACTTTTTATATTTTTAGTAGAGACGGGATTTCCCCATGTTGCCCAGGTTGGTCTCGAACTCCCAGCCTCAGATGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACCATGCCCGGCCCACAGTGTTGTTTAGTTCAGCAATGTCCTTACTGAGCCTCTGCCTGCTGGATGTGCTCATTCTGATAGAGGGTACTAAGTCTCCAACAGTAGTGGAGGATGCGTCTCTCCTTACAGCTCCATCAGCTTTTGCTTCATGTGTTTCGAAGCTTTGTTATTAGATGTGTGAACATGAATGATTTTTATGTCTTCATAGAGAAACAACCCCTTTATCATGTTGTCATGCCCCTTCCACCAACAATTTTCCTTGTTCTAAAGTACTCTTTGTCTAAATTAATATAGCTACCCCAGTGTCTTTGGATTATTATTAGCATAGCATATATTTCTTCATTCCTTACTTTTAAACTATGTGTGTCTTTATACTTACAGTGGGTTTTTTATAGACAACATATATAGGGTCAGGTCTTAGTTCTTTTTATCCGCTCTGAAAATCTGTCAAGTGGTGTATTTAGGCTAGTCACATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCACGTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAGGCTAGTCACATTTAAAGTGATTATTGATATAGTTGGATTAATATATACCATATTCTTAAACATTTTCTCTGTGTTGCACTTACTCTTTATTATTATCATCCCCTCTTTTTTTCTGCCTTCTCTGGTTTTAATTGAACGTCTTATCCCACACTCTCTCCTCTCTTAGCTTATCAGTTATACTTGTTTTTCCAAAAAATTTTAGCATTTCCCCAGAATTTGCAATAATCATTTATGACTACTCTAAGCCCTCTTCCAAATAGCATTATACTGCTTCACTTAGAGTGTGGCTATCTTACCACAATGTACCTACAACTTCTCACTTCCACCCTTATAAAATTTCTGCCATTTATTTTACTTATCCACGTGCTATAATCATGTAATACACTGTTACTATTATTACTTTGAACAAATAGCTATTATTAGAGAAATTAAGAAAAAGAAAATATGTTGCTTTCCTGTCATTTATTTATTTTCTGCTGCTCTTCCTTTTTTCACGCATATGCAAGTTTCTGATCTATCTCATTCTTCCTGTTTCCAAGGAACTTCTTTGAACATTTTCTGCTGGGCAAGTCCACTGGTAACACATTCCTCAGTTTCTGTTTATCTGAGAAAGTCTTTATTTCTCCTTCACTTCTTAAGGATAATTTTACTGTATACAGAATTATAAGTTAGCACATTTTTTTCTCAACACTTCCAATACTTCACTCTCCTCTTGCTCGCATCGTTTCTGATGAGATGTTTCCAACGTCTCGTTCCACTCTTGGTCAGATGTTCCCCCACCCCCAGCTTCCCTCGAGGTTTTCAGCTTGGTTGTCTGCAGTTTGAATATGACGTGCCTTAGGATCAGTTTTTTGGCATTTGTCTTTTTTGACAGTCACTGAGCATCCTAGACGCGCGGTTTGGTGTCTGTCAATACTTTTGGAAAATCTCAGCCATTATTACTTCCAACATGTCTTCTCCTTCGCTCTTTCTGCTCCTTCCGGCACCCGCCGCCCACTCGCACCTTCTGTATTTGTCTCTCTGCTCCGCTCGCTCCGCTCGTGGTTCCCTCTGCGTTTCTGTGTTCGCGCTCCCGGCCCCCTTCCTCAGACACGCGCAGCCTCCGGCCGGGCGGCGGCGCACTGCGTTTCCACCTCGCATTTCCTGTACTCCAGCGCGCCTTGTCCTTCCCAGAGCGTCCATCTCTTTGCTTATGTTACCATCTGCTCCGGTGCGCTGCCTCCGTTTTCTAGTAGCGCCTTTAGCATATTGATCATCATAATTTTCCTTTTTTTTTTTTGAGACATTGTCTTGCTCTGTGGCCCTGGCTGGAGTGCAGTGGCTCAATCTCGGCTCACTGCAGCCGCCGCTTCCTGGGTTCCAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCGCGGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGAGTGTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACTTCAGTTGAACTGCCCGCCTCAGCCTCCCAAAGCACTAGAATTACAGGCATGCGCCACCTCGCCTGGCCTGATCATAGTAATTTTAAATTCCCAGTCTGATAATTCCCAACTTCGTGTCACATCTGAGTCTGGTTCTGAGGCTTGCTTTGCCTTTTTGGACTGTTGCTTTTTCTTGCCTTTTAGCATGACTTATAATTTTTGGCCAAAGCAGGGACTGGGGCAAATCAGCCTTGAGTGTGGGATTTGGGGTCCATCTGGCCGGGAGCTGGGCTGTATTGAATGAACATTTGCTGCAGCTGAGGGTGACAGCAGCTTCCGCGCCCTTGTTTATGGTTTGTTTTTGCTTCTGTATTAGCTTGAGCTGCCATAACAAAATACCACACACCGAGCACCTGAGACAGTGGGCATTCGTTTCTGACACTTCTGGAGGCTGTGAAGTTCCAGATGAAGGTGCTGACCAGGTTCCATTTCTGGCGAGGGCTCTCTCCCTGGCTTGCTGTGTCCTCGTCCCATAAGGGCACGTCTCGTAGGGGCCCCAGGCTCGTGACCTCACCTAACCCTAATCATCCCCCAGGGCCCCACCTCCACTCACCATCGCATCTCGGGTGAGGGCTTCACAGATGCATGGGGGGAGGGGCACGCAATCTAGTACACAGCGGGAACCACCCAGCAACAGACCTCAGTTTTAAAAGTGTGGCTCTGGCCAGGTGTGATGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGCGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAAATGGTGAAACCCCATCTCTAGTAAAAAATACAAAAAATTAGCTGGGCGTGGTGGTGCATGCCTATAACCCCAGCTACTCAGGAGGCTGAGGCAGGAAAATTGCTTGAACCCGGGAGGCAGAGGTAGCAGTGAGCCAAGATCGCGCCACTGCACTTTAGCCTGGGCAACAAGAGCAAAACTCCATCTCGAAAAAAAAAAGAAAGAAAGAGCCAAGAGTCAGGCGTATTTGCCCGTTCTGTTGTCTGGTCACCCCAGCCCTAAACCAGGCAACAAGTGAATTACCAACACCTAGGAAACTCCTTGTTTCCAGCCTCTCAGTCTGCAGGCATGTGGAGACCAGCTCAAGGTTCTAACACGTGACCTTGTGTCTCCATGTGAGACTTTCGATTTTGCACCAGACATTGCCCAGTCCTAGGAAAAGCTGTTTCTGGGTCTTGCCCTCCGAACGGCATTTTTAGGCATCCTGACTTGCAGGAGGCACAGGCCTGCCTCACGGCTCTTTTTGAAAATAAAAGTTTGTGATGAGCAAAGATTGGCCCCCGCAGTCCGCCCAACGCCTGCACTTCGTCTGCCTCCTCCTTGAGCTGTGGAAGGAAAGCTGGTCACTGGGATTGAAGCAGCCTCTGGGCGCTCCCCCCTCCCTCTGTCCCGGGCCCTCACCTGGACAATCAGGAACTACCTTCTGTCCCAGGCACCCTCCAGCTGGAGGCCCCTGCCATTCCCTTTCTGAAAAGCCTCTCGGACACTCCCATCAGAGCCAACAGAGGCCGCAGGAAAGCCATGGGTTAGGCCCTACAGAGCTCAGGTTTCTCTCTGACCTGTCACGGCAGCTGCCTGTTCGGCTTAGTGGAGCAATTCTCACCGCCCAGCTGTCTGAGCTGCAGCAAAGCTGCATGAAAGGCCTGTGGGTGCAGGGCTGCAGCTCTCACCTTCAGGCCGGCCATGCGTCAGGACCCGGTGGCTCGCTGCAAGGGCGGAGGAGGTGCCCCGACTCAGGTCAGGCATGGGAGGAGCGGGGGAGCCTTCTGTCTCTGCAGGTCTGACTCCTGCCTCCTGTGAGGAAGCAGAGCCATTCAGAAGTGAGAGGCGGCCAGGAGGGGCGGGCGTGGTCTGTCCACACCGGGCAGTGGCGGGAGCCTGTTGAGCTGGCCAACTTCGGACTTAGGGCCCCACCATGATGAGCCAGATGGAGCTGTGGGGAGATCCACGCTGGCACAGCAGTCCGTCTGCCGTAGCGAAGCCCCGAGCACGGCCAACAGCGACCCACAGTGGGGCGGGGCGGGTGATCCTGGGTGTCTGTCGCCTTTCCTTTTAATACAGTGTTCTAGTTTATAGGTTACATGATTTAATTGACATAATGGCCATGATTGAATTGTCATAATGGCTATGTTTAATGGCTGGCTCTCAGAATGCCTGAGGATTCAACAACCAGCTCTGAGAAGCTCACCATGAGATGAAGCCCTCTGCCCTGATGCCAGGACACACACTAGATTTGTCAAGGCCCTGGGCCCAGGGGGAAACGTCTCCAGAAACAAGGCTCCTGGGGCTGGGGCTTCAGTAGGGCCGAGGCCCGTCCTAGCGACCAGGCCTCCAAGGGACGCTGGGGCCACCTGCTGCTGCTTTGAAAGTGAAGGAGCGCCATTCTTGGATTCCCCAGGCACTCGCTGGGGTCCCTTATGCTGACCACAGCCTGGGAAGACTGTTCACTGGTGGACCCACAAAGGCCTGGGAAGACTGTTCGCTGGTGGACCCACAGAGGCCTGGGAAGACTGTTCGCTGGTGGACCCACAAAGGCCTGGGGTTGGGACCGCGTAGGCCTGAGCGCTTGCCTCCCACCACAGCTATGGCCCAGGGCTCAGGGTCGGGGGGAGACTCTGGCCCTACTCCACTGGCTGGGCAGCCAGTGGGGATCCCATCTGCCCTGGCCCCTCAGGACCTCCTGGCCCCTCCTTCCCATAAGTAATGAGAGGGCCATGAGGCTGAGCAGCTCCCCTTCCAGGGCCATATGCGTCTCTGTGCCTTCTGCCCCCCATGTCAGTGGATCCCTCATTTCTGAGTACACGGGGTGGCCACCGCTGTCACCCTGGTTTCACCCTGGAGCATTAAACCTGACCCCAGTCAATGCAGGAGGGACACAACCTCAGCTTCCATGCAGCCCAGAAGCCCAGGCTGCTCGAACCATCCCCGGGGCCTTGTGGATGCAGCAGGTGTATCCTGTACCGGGGTGCTGGGACGCTGGGCACGGGCTTGGGGCAGGAGGGGCCCCCGCTCCCTGAGGAGGGGACAAGTCTGGAAAACTCCAGGGCGGGCCTCCAGCCACACCTTGAAAAGGGGGTAGGTCCCACCCAGCACTGGATGTTTGGCTTAACAAGTTCCCAACATTTTAAAGTCGAGACAATTCACGTAAGAATTAGGGTTTCTACATCTCTTGAAAGGCTGAGAGCTCAACACTGCTGGGTGTCCGGCCCCCCCTGTCCCCACTGCCCAGGACAGGCAGACCCCAGGTGCGAAGCCTCACAGCCTGCTTCCTCCACACAGGCAACAGCCTCCATCAGAGGCCTCAGGGCTCCCCTTCGATCTGGAGTTGGAATTGAGGGATGCTGCCCAGGAAGATGCCAGGGACACCTGCGTGGGCAGAGAGGGCCCAGGAAGGCCCCAAGCGTGGGGTCAGGGCACCGAGGGGACAGAGTGGAGGGGGTCCCCCAGCCCAGAACCACCCAGGCACCAAGACTCCCAGCAGTCAGGACAGAAACAGCTCCGACACCCACACACAGGGAGGGGGGCCGGCAGGGAGGGCTGGCGTCTGGAGGCTGCGGAGGCGAGAAGGCTGGTTGGGGAGGCTGCGTAGATGCCGTTTCAGAGCAGGCCAGGGTCGGAGGTTGGAAGAGCCATTCCGGAGGGCAGGGGGTGTTGACGGGGGCACAGAGGAATGCCCTGAGCCCGAGCCGGCAGCGAAAATCCACCCGCCACACGCTGAAGACGCCTGCACTTCAGTCAGTTGCTGTGTGCACCAGCAGGCTTTTAACCGGAAAATTAAAAATGAAAACAAGGAGGACGGCAGAAGCCTCAGGGTGGGGCTGCTGGGCTGGGACCACCTTGAACTCAGTGCCTCCCCTCACTGAGGTGCCGATGTCAACGGCAGTGGGGCTGTCACAGGCAGGACGGGCTGAGGCGGCGATGTCAACGGCAGTGGGGCTGTCACAGGCGGGGCAGGGGCTGAGGTGGCGATGTCAACAGCAGTGGGGCCGTCACAGGCAGGACAGGGCTGAGGCGCCGATGTCAACAGCAGTGGGGCCGTCACAGGCGGGGCAGGGGCTGAGGCGGCGATGTCAACGGCAGTGGGGCCGTCACAGGCGGGGCAGGGGCTGAGGCGGCGATGTCAACAGCAGTGGGGCCGTCACAGGCGGGGCAGGGGCTGACCCGTGGGGTCAGACTGAATGGGGAGTGGGGGCCCCAGGGGTTGGTGGGTCCTCAGGGGGGGCCTCCTGGAAAGGACTTGAGGCCAGGCCTTGGGAGGAGGAGGGCCTGGGATGAGGGCCTGGAGGCAGAGGCCAGAGCCCGTGCGAAGGCGCTGAGTTCGGCAGGAGACAGACTGAGTGTGGGAGGGACGCAGAGGGCGCAGAGGGTGGGGCCGGGCCTCCACCTGCGGCTCTGGGTGAACCAGTCACGCGAGGAGAATGCACCTGGCGATTCCACACATCTACAGCGAGTCTCCTGAGCCGCAGGCGCCGGGGCTGTGGAGAGCCGTCTCCATTCAGCAGGCGCCAGGGCTATGGGGAGCCGTCTCCATTCAGCAGGCTCTGGAGCTATGAAGAGCCGTCTCCATTCAGCAGGCGCCGGGGCTATGGGGAGCCGTCTCCATTCAGCAGGTGCCGGGGCTGTGGAGAGTGCTAGGGCGGTCGCCATCTGCACCTGCTGTTTTCCCAAGTCCTGTTCTGGACCCACTAACTCCAGTGACTGAGCTGACTTCTTCACACGGGCATGGGGCCAAAGCTCCTGACCAGTGCAGGGACACGGGGGGTGGGACATACTCAGATAGGGGCTGGGAAGGCTGGGAGCTTCTGCTGAGGGTGGCACCAGCAGCAGCTCCATGACTGTGACTGCGGCCAGGGCGGCTCCACGACGGTGACTGGGGTCAGGGCAGGAGAGTGTGGAGGCCAGTGAGGAGGGTCCACACCCATCGGTGAGGCAGGAGTCAGGGTAGGCTGCAGACCCGGGCGGAGATTGCGAGGCAGGGGTCAGGGTCACTGGAGAAACATGGCTCAGGAAAGGCTTCAGGGAGAAAAAGGTGTTGGACGAGAGAGGCTGGTGCTCAGGGGCTGCAGGGGGGCCGGGCCTCAGCAGGGAGGGAGGGAGGGACTCTGGGAACAGCAGAGCCGGCACTGAGGATGCTGCCAGGGAAGGGCACTGACGTGCATGGACCTGGAGGATGCCACTGGCCAAAAGCTAGGATCTCACTCACATGTGGGATCCGAAAACCCTGAATTCATGGAAACAGAGAGTGGAAAGGGGGTTGCAGGAGGCCGGGGCAGGAAGAGAGATAGAGAAAGCAGAGACGTTGGTGAAAGGGTGCAAAGCGTTCGTTAGCTGGAGCTGTGGGCTTCAAGGTCAGCCGCGCTGTGTGGCGGCCACCACTGCCGTTAACCACAGTACACAGGGTGCTCGGTAAGTGCAGTTCTGCTTCCGAGGATTTATGATGTGGGAAAAGTTTTAAATTAAAAATAAGAATAAGAATGTAAAACAATACAGTAGAACAGCCGTTTTCATGGCCTTGCCTTGCACTGGGTGCTAAGTCATCGGAGATGATTTGAAGTCCTGGGGGTGCGTGTGCAACCTCTGTACAAACTCTAGGCCATTTCACATCCGGGACTTGAACATCCTCGGATTTTGTTATCAGAGCGGCGTCCTGGAACCAATTTCCCTGAGGATGCCGAGGGATGACTGTATTGTATACCAAATTGCTAGAAAATAGACTTGTAATGTTCTCACCACAAAAAAAACAAGTTGGTGAGGTGATGGATATGTTGATTAGCTTAATTGAATCTTTCTGCAACAAATACTTACATCAGAACATCACGCCAAACCCCATAAAACATAAACCCCATCAATACACACAATTATTCAACTGAAGATAAACTAAAATCAGTAAAATCAATGTACTGGGAAATAAAGCTACGAACATCTCACTGCCCTTGGCAACAGGAGAGCCTGGTCCTGTTCCCACCATGAGCTGAGTGCCAGGGGGTGGAACTTCAGAGGGCCTGGCAGGGAGAGAGCTGGGCTAGGACACCGCAGCGGAGGAGAGGGAGCTGGCACCATGCGGTAGAAGACCCAGCGGCCGCCGCGAGTGTGAGGAGGCAGGGCCTGGTGGGGCCTGGGTCTGGGCCTTGACCAAGGAGGCAGAGAAAGGTGGCCCAAGGAGGGCCCTGGGGTGAGTCTGAGCCTGGTGGCAGCGCTGACCCAGCAACCAGGGGCCTGTGCAGCGGGATGTCCTGAGTGGGGTCTGGCCAGGACCTCGTGGAGTGCGTCAGCAATGCTTCACTCTCAGACGCTTGGCGGAGGCCACAGGCGGCCTGACGTGCGGAAACCACGGCCCGATGTTCTCAAAGCCCTGCTCGCCGCAGGTGGTTCTGGAGCAGCCGGGCGGAGGAAGGGCTGGTCGGATGTTTGCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCACTCCTGAGTGATCAGGGACACGACCGCAGCCTCGAGGCCTCACCGCCAGCCAGCTCCCGGGCCCCACAAGCTCAGATGAAACCTGGCCACGGAGCCACCAATCAGGGTCTGTGCCAGGCTCCACGGCTGGGCAGGTGGTCAGATCAGGGAGCGCACCTGTGTCAGGCTTGAGTTAAACCCCTGCTGCTGTGGTCAGACCGGCGTGAGGGTGGGAGTGGCCACAGGCCCACAGGTGTGCCCCTCCCTCCAG
Seq C2 exon
GTGCTGCTGTGGTCGGCCAACAAGGTGTTTGAGGAGCTGACGGACATCGAGAGGCAGTTCCACAAGGCCTTCTACACGGTGCGGGCCTACCTCAACTGCGAGCGGTACTCCGTGGGCCTCCTGGACATGACCAAGGAGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000133256-PDE6B:NM_001145291:3
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.044
Domain overlap (PFAM):
C1:
PF0159021=GAF=PD(7.4=36.7)
A:
NA
C2:
PF0159021=GAF=PU(18.0=68.1)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)