Special

ENSG00000133256 @ hg19

Biotype
protein_coding
Gene Symbol
PDE6B
Description
phosphodiesterase 6B, cGMP-specific, rod, beta [Source:HGNC Symbol;Acc:8786]
Coordinates
chr4:619373-664571:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
20.41
49.31
0
Alternative 5'ss
65
chr4:661731-661795
+
79.59
49.31
0
Exon Skipping
67
chr4:649729-649795
+
95.34
17.5
0
Exon Skipping
48
chr4:650034-650081
+
92.25
14.45
0
Exon Skipping
147
chr4:654256-654402
+
97.07
10.52
0
Exon Skipping
151
chr4:661645-661795
+
80.64
63.64
0
Intron Retention
1457
chr4:651284-652740
+
33.94
85.41
0
Intron Retention
1449
chr4:652807-654255
+
47.84
96.36
0
Intron Retention
1520
chr4:654403-655922
+
53.8
96.06
0
Intron Retention
267
chr4:656031-656297
+
64.16
99.72
0
Intron Retention
481
chr4:656408-656888
+
58.8
99.77
0
Intron Retention
582
chr4:656977-657558
+
65.22
99.19
0
Intron Retention
243
chr4:657660-657902
+
41.38
79.48
0
Intron Retention
87
chr4:647782-647868
+
23.27
88.91
0
Intron Retention
669
chr4:647944-648612
+
37.38
77.99
0
Intron Retention
1051
chr4:648678-649728
+
24.6
91.34
0
Intron Retention
238
chr4:649796-650033
+
69.38
98.29
0
Intron Retention
581
chr4:650082-650662
+
59.64
98.25
0
Intron Retention
327
chr4:650813-651139
+
36.35
98.58
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000029491 Pde6b 1-to-1
Mouse mm9 ENSMUSG00000029491 Pde6b 1-to-1
Rat rn6 ENSRNOG00000000065 Pde6b 1-to-1
Cow bosTau6 ENSBTAG00000017480 PDE6B 1-to-1
Chicken galGal4 ENSGALG00000015373 PDE6B 1-to-1
Chicken galGal3 ENSGALG00000015373 Q802E5_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000011671 pde6b 1-to-1
Fruitfly dm6 FBgn0038237 Pde6 6-to-1