Special

ENSG00000133256 @ hg38

Biotype
protein_coding
Gene Symbol
PDE6B
Description
phosphodiesterase 6B [Source:HGNC Symbol;Acc:HGNC:8786]
Coordinates
chr4:625584-670782:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
19.93
50.39
0
Alternative 5'ss
65
chr4:667942-668006
+
80.02
50.39
0
Exon Skipping
67
chr4:655940-656006
+
90.18
31.78
0
Exon Skipping
48
chr4:656245-656292
+
91.02
19.31
0
Exon Skipping
151
chr4:667856-668006
+
81.18
63.64
0
Exon Skipping
65
chr4:654824-654888
+
94.43
16.33
0
Exon Skipping
58
chr4:652496-652553
+
7.85
51.81
0
Intron Retention
1457
chr4:657495-658951
+
26.67
86.96
0
Intron Retention
1449
chr4:659018-660466
+
38.9
97.13
0
Intron Retention
1520
chr4:660614-662133
+
47.85
97.21
0
Intron Retention
267
chr4:662242-662508
+
54.73
100
0
Intron Retention
481
chr4:662619-663099
+
48.62
100
0
Intron Retention
582
chr4:663188-663769
+
47.49
100
0
Intron Retention
243
chr4:663871-664113
+
33.53
88.06
0
Intron Retention
659
chr4:664222-664880
+
14.75
40.26
0
Intron Retention
87
chr4:653993-654079
+
8.02
23.48
0
Intron Retention
669
chr4:654155-654823
+
33.02
95.74
0
Intron Retention
1051
chr4:654889-655939
+
15.37
91.58
0
Intron Retention
238
chr4:656007-656244
+
60.3
99.73
0
Intron Retention
581
chr4:656293-656873
+
51.7
99.1
0
Intron Retention
327
chr4:657024-657350
+
30.08
98.58
0
Intron Retention
2042
chr4:668007-670048
+
67.75
93.22
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000029491 Pde6b 1-to-1
Mouse mm9 ENSMUSG00000029491 Pde6b 1-to-1
Rat rn6 ENSRNOG00000000065 Pde6b 1-to-1
Cow bosTau6 ENSBTAG00000017480 PDE6B 1-to-1
Chicken galGal4 ENSGALG00000015373 PDE6B 1-to-1
Chicken galGal3 ENSGALG00000015373 Q802E5_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000011671 pde6b 1-to-1
Fruitfly dm6 FBgn0038237 Pde6 6-to-1