HsaINT0186867 @ hg19

Intron Retention

Gene

ENSG00000249471 | ZNF324B

Description

zinc finger protein 324B [Source:HGNC Symbol;Acc:33107]

Coordinates

chr19:58965063-58965711:+

Coord C1 exon

chr19:58965063-58965189

Coord A exon

chr19:58965190-58965594

Coord C2 exon

chr19:58965595-58965711

Length

405 bp

Sequences

Splice sites

5' ss Seq

TTGGTAAGG

5' ss Score

8.92

3' ss Seq

TCACCTGCTCCTCCTCACAGGAC

3' ss Score

11.69

Exon sequences

Seq C1 exon

GACCTGATGACCTTCGAGGATGTGGCCGTGTACTTCTCCCAGGAGGAGTGGGGGCTCCTGGACACAGCGCAGAGGGCCCTGTACCGCCACGTGATGCTGGAAAACTTCACACTTGTGACCTCACTTG

Seq A exon

GTAAGGCCCTGGGTGCTCCATGAAAAGTGCACTTGGTGACAATCAGGACTGCCTCTTCACTTCCCTCCTGGTTGATGAGCAGGATCAAATCTGGCCAGGGCCACGTGGAACAAGGGTCTGGTCCTGTAGACACAAAGTTTGGTTGGGTCAGCCACTCCTTGCCGCCCTGTCCAGCTGTGGCCTCTCTCATGCCTGGGCTCAGTCCCGTTGCTTTGGTGCTCTGGGCACAGTTGCTGCTCTGGGGACACATGAGCTATTCCTATGAGCCCCTTGCCCTGTGCTATCTTTAGATTCTCCCAGTTGCACAGATTACTGTCTATTTCCATGAAGCCCTGACTCCTGCTCTCTGTTGGGAGGTGGGTTGTCTTGACCTGGGGCTGGGCTCTCACCTGCTCCTCCTCACAG

Seq C2 exon

GACTCTCTACCTCCCGACCTCGTGTGGTCATTCAACTTGAGCGTGGCGAGGAGCCCTGGGTTCCCAGTGGAAAGGACATGACCCTGGCCAGGAACACCTACGGGAGGCTCAACTCTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000249471-ZNF324B:NM_207395:2

Average complexity

IR-S

Mappability confidence:

NA

Protein Impact

ORF disruption upon sequence inclusion (1st CDS intron)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=NA C2=0.150

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.9),PF097235=Zn-ribbon_8=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9)

Main Inclusion Isoform:

NA

Main Skipping Isoform:

ENSP00000337473