HsaINT0187675 @ hg38
Intron Retention
Gene
ENSG00000196357 | ZNF565
Description
zinc finger protein 565 [Source:HGNC Symbol;Acc:HGNC:26726]
Coordinates
chr19:36182294-36194328:-
Coord C1 exon
chr19:36194233-36194328
Coord A exon
chr19:36183734-36194232
Coord C2 exon
chr19:36182294-36183733
Length
10499 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGC
5' ss Score
9.88
3' ss Seq
ATCTTTTTCTTATTTTTCAGACT
3' ss Score
10.83
Exon sequences
Seq C1 exon
GACTCTCCATTTCTAAGCCTGATGTCGTCTCCTTATTGGAGCAAGGGAAAGAGCCCTGGATGATTGCAAATGATGTGACAGGACCATGGTGCCCAG
Seq A exon
GTAAGCGAGGGCCGATTTCGACAGGGGAAGGTCCCTGGATGAGTCGACTGACAGGAGTAACTTGAGTTACTGTGGGAAGTTCCCTCAAAGCCCTACTGTGGAAGAAAGGCCTGAAACGTGAAGATGTGGCGAGTAAAGACTTTATTAGCGTCAGCTTCCAAGAGAACCTTGGCCTACTCCCATTAATTCCTCTCTGGTCTCTGTTCTCTCACATTTTCCTTTCTTTTTAAAAAGAGATGTACCTATTTCTTCCCCAGTGGCCAACTTTTTACCTGTACTTTGTATCCTTTTTCTTTAAGAGACAGGATCTCACTCTGTCACCCATGCTGGAGTGCAGTGGCGTGATCATAGCTCACTGCAGCCTCCATCTCTTGGGCTTAAGCGATCCTCCCACTTTGGGAGGCCAAAGTGAGATTACAGGTGTGAACCATGGTACCTAGCCAGATCCTTTTTTCTACAAGTGTCTTCATCCCTTAGAAAAACTTATTTTTGGCCGGGCGCAGTGGCTCTACGCCTGTAATCCCAGGACTTTGGAAGGCCAAGGCGGGCGGATCACGAGGTGAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCACATCTCTACTAAAAATACAAAAAAATTAGCCGGGTGTGGTGGTAGGCGCCTGTAGTTCCAGCTACTCGGGAGGCTGAGGCAGGAGTATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAGAAAAAAGAAAAACTTATTTTCTTGGCCAGGTATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGCAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCACCCTGGCCAACACGGTGAAGCCCCGTCTCTACTAAAAATACAAAAATTGGCCAGACGTGGTGGCTCACACCTGTAATCCCTGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCTGGGTGCGGTGGCAGACGCCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATCACACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAACAAACAAACAAACAAACAAAAAACTTAGCTGAGCATGGTTGTGGGTGCCTGTAATTCCAGCCACTCGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCATGAGGTGGAGATTGCAGTAAACCGAGATCATGCCATTGCACTCCAGCCTGAGCGACAAAAGTGAACGTCTATCTCAAAAAACAAACCAAAAAAAAAACCATTTTATTGGCTGGGCACAGTGGCCCATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGTGGGAAGATCACTTGAAGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGTAAAACCCCATCTCTACTAAAACCTCCGCCTCCCAGATTCAAGTAATTCTCCTGTCTCAGCCTCCTGAGTAGCTAGGATTACAGGTGCACGCTACCACACCTGGATAATTTTTGTATTTTCAGTAGATACAGGGTTTCACTATGTTGGCCAGGCTGGTCTCAAACTCCTGAGCTCAAGTGACCTGCCCACCTCAACCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCAGCCAGCTGATCCTCTTAATGAGTATTTTTTTGTAGATTGTCTCTCACTTTACGTTTGTCTAATGTTTTCTCACAGTGAGATTCTGCATTTTAGCAAGAATATCACAGAAGTGATGTTATGTTCTTCTCTGTATATCACATATCAGACATCAACATGGCTTATTACTGGTGCTGTTCAGTTTGATCACTTGGTAAGATAGGTGCTGTTCACACTTTGGGAGGCCAAGGCGGGCGAATCACAAGGTCAGCAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCGTCTCTACTGAAAATATAAAAATTAGCTGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGGGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAAAAAAAAAAAAAAAAGATAGGTGCTGTTCAGTTTGATCACTTGGTAAGATAGGGCCTGTCTTGTTTCTCCCCTGTGAAGTTTCCATCCGTAATTGATAAATATCTTATGGCGAAATACTTTCACACTAGGCAAATGTGCTGCTTTTCCTCCTCCCACTCCGATTTTGGCATCCATCACTGGACCTTGTCTGCACCAGTTATTACTCTGTCACTTGTCTAATGTTGATTTTCTGTGTCCCTTATTCCTTCACCATTTATTAATTGGAATTCTTCAATAAGGAAGAACTGTCCCTAGCCCTCTTCCATTCACTTGTTCATTCAATGATTTCTTTATATCACGATGAGTTCGTGGGTATTTATTTTATTCTATGGGCTGTAGTCACTACTTTCATTGTTTATTTCATTGCTCGAATCGTTCAGGCTTTGGCCCTTGAAAACTCGTTAAGCTTGGCTCCTGGGTTCTCTCAACACACCCACATTCTCTTTTATATACTTCCACATTTTCTGGTACCACAGCATGTTCCATGGTTATTTCAGATTTTTCCTGCCTCAGCCCTGAAATCAGCCAGTTCTCAAAAGAATGCTGGTTCCTTTTATTGAAAAATGGTTCAGGAGGCAGAGGTAGCTGAGAGCCGAGATTGCCCCACTGCACTCCAGCCTGGGCAACAGGAGTGAGACTCCATCTCGGGAAAAAAAAAAAAAAAAAAGAAAGAAAAATGGTAGGAAATCGATCATATCTTTGAACTTTTTCTGAGCAAAGCAAGACCTTAACATCTTTACCATACCATCTTTTACTTCCCTGTGCCCTAGACCAGGGGTCGGCAAACTGCAATCTGTGGGTCAAATGCAGTCCATAACCAGTTTTTCATACAGCCCTAGAGCCAAGAACAGTTTTGATATTTTGAAAGTGTTAAAAAAAAAAAAAGAATATGCTGTAGAGACTTTATGTGTTCAACAAACCCTAAAACATTTACCATTGGGCCCTTCACAGAAAAAGTTTGTTTTTATGTGTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCATTGCAACCTCAGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAATACAGGAGTGCGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGATTTCGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACCCACCTAGGCCTCCCAAAACTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCTGGCCTTCCCACTTTCACTTCCAAGGACCCTTGTGAATACATTGTGTCCACCCAGATAAACTGGGATAATCTCGCCATCTTGTGGTGGTCAACTGATTAGCCTTTTTTTTTTTTTAATTTTTTTTTTTTGAGATGGAGTTTCGCCCTTGTTGTCCAGACTGGAGTGCAATGGCGAGATCTCCGCTCATCGCAACTTCCGCCTCCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTGTATTTTTAGTAGAGGCGGGGTTTCTCCATGTTGGTCAGACTGGTCTCAAACTCCCGACCTCAGGTGATCCACCCTCCTCGGCCTCACAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCTGCCCTGATTAGCAATCTGAATTCCAACTCCCCTTGCTGTGTGACAACATTCATAGGTTCCAGGAATAAAGACACAGACATCTTTGAGTGCCGTTATCCCACCTACCACATTCTGTATGTATTTTTTTTAGCAAAGTTAATTGAATATGCATAAATTAACAATGTATGGACGGGCGCGGTGGCACACACCTGTAATCCCAGCACTTTGGGAGACCAGTAGGTGGATCACTTGAGGTCAGGAGTTCGAAACCAGTCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCATGTGTGGTGGCAGGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGACAAGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAAGGAACCAAGATCGATCGCGCATCTTTATTCCAGCCTTGGCAACAGAACAAGACTCCATCTCAAAAACAAAACAAAACAAAATAAAACAAAAACAACTTTATGGGTACGACTCTACTGTAATTCCGTATTAAAATATTAAGCCTATTGCTGTTGATTCCATAAAAGTGTTCTTGTCTTTCACAGAATATTTGGTTGGTGTGTTTTCTAATTTCTTGCAGTTCTGAAAAATAATAATCTTTTATTTATTAGATTTTTAAAAATTGTGATAAAATATACATTACATAAGGGGCCGGGTACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGATCAGGAGTTCCAGGCCAGCCTGGCCAACATGGTGAAACCCCATCTCTATGAAAAGTACAAAAAAAAAAAATTAGCCGGGCATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAAAATTGTTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCACACCACTGCGCTCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAATTACATAATATTTATTTATTTATTTTTGTGAGACAGGTTCTGGCTCTGTTGCCCAGGCTGGAGTGTAGTAGCACGATCTCGGCTCACTGCAACCTCTGCCTCCCAGTTTCAAGCCATCCTCCCACCTCAGGTTCCCAAGTGGCTGGTGCTACAGGCACATGCCACCATGCCTGGCTAAGTAGATAATTCAGTGGCATTTAGTTCATTCACAGCATTATACACTCTGCTTCCAGAGCTTATGCATCATCCCAAACAGAAACTCTGTACCCATTAAACAATAACTCTATTTTCCTTCCTCCAGTCCCTGGTCACCTCTGTTCTACTTTTTGTCTGTATGAATTTGCCTATTCTAGGTATCTCATGTAAATCATCCAGTATGTGGCCTTTTGTATCTGGCTTATTTCACTAAGGATAATGTTTTATCCAAGTTGTAGAATGTCTCTGAATTTTATTCTTTTTATGGCTGAATAATATTCCATTGTATGTGTGTATGTAGATGTATACATGTATAAATACTAATATACATGTGTACATATTATATACACACTTTGTTTATTCACTCATCTGTTTTTTGTTGTTGTTGTTGTTTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTTGCCCAGGCTGGAATGTAGTGGCATGATCTCAGCTCACTGCAACCTCCACCTCCCAGATGCAAGAGATTCTCCTGCCTCAGCCTCTTGAGTAGCTGGGACTACAGGCACCCGCCACCATGCCTGGCTGATTTTAGCATTTTTAGTAGAGACGGGGTTTCGCCACATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAACTGACCTGCACGCCTCAGCCTCCCAAAGTGCTGGGGTTACAGGCATGACCTACCACATGCGGCCCCCTCATCTGTTCTTGGAGTTGTTTGTTTTTTGTTTTTAATTTTTTTTTCTCTCTCTCTTTTATTTTTCCTTGAAGCCCTTGAGTCTCACTTTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACAACACCATGCCAGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTGTTAGCCAGGCTGGGCTCGAACTCCTGACCTCATGATCCATCTGTCTTGGCTTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTACGCCTGGCCCCTAAATTTATATTCTTTATAAATTTTTATCATCTTGGCCTATTTCTGAGAAAGGTGAATTGAAATCTCCAAGATGACGATTTTGTTAATTTCTTCTTGTGTGTCTTTTGAATTTTGCATTATATGTTTGGAGGCTGGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCATGAGGTCAGGAGATCAAGAAAATCCTGGCTAACACAGTGAAACCCCTTCTCTACTAAAAGATACAAAAAATCAGCCAGGCGTGGTGGCACACGGCTGTAGCCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGCCAGAGGTTGCAGTGAGCCAAGATTATGCCACTGCACTCCAGCCTAGGCGACAGAGCAAGACTCTGTCTCGGCCGGGCACCATGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGAGCACAAGGTCAGGAGATCGAGACCATCCTGGTCAGTGAAACCCCATCTCTACCAAAAATACAAAAAATTAGCCAGGCGTGGTGACGGGCGCCTGTGGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATGGCGTGAATCCGGGAGGCAGAGCTTGCAATGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAGAAAAAAAAAAGAGACTCTGTCTCAAAAAATAAATAAAAATAAATATATATATTAGGAGGCTATTAGGTGTATATAACTTTAGAAACATAAATCTTCCTGCTGAATGGAATTACTTTCTTGATTATAGAGCTACCCTGCTTAACCCAAAATGATGATTTCTGTTTTTAAAGTCTATTTTTTTTTTTTTGAGATGGAGTTTCGCTCCTGTTTCCCAGGCCGGAGTGTAATAGCACGATATTGGCTCACCGCAACCTCCGCCCCCTGGGTTCAAGCAATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGCATGTGCCACCATGCCCAGATAATTTTGTATTTTTAATAGAGACAGGGTTTCTCCATGTTGGTCAGGCTGATCTCAAACTCCCAACCTCAGGTGATCCACCCATCTCAGCCTCCCAAAGTGCTGGGGTTGCAGGCATGAGTCACCGCACCCGGCCACACCTTTTATTTTCAAACACCTTAGGTCTTCATGTCTTAAAGTGTGTTACTTGTTACTACTGTGCACCTAGATTTTGGTATTTTATCCAATCTGACAAATGCCGTCTTGTCTTTTTTTTTTAAACAAGTTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACTATTCTCGGCTCACTGAACCTCTGTCCCTGGGCTCAAGCCATCCTCCCACCTCAGCCTTCTGAATACCTGGAAACACAGGTGCCTGCCACCATGCCCAGCTAATTTTTTGTGTTTTTGGTAGAGATGGGGTTGCACCATGTTGCCCAGTCTGGTTTCGAACTCCTGAGCTCAAGTGACCCACCTGCCTCAGCCTCCTAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCCAGCTGGGTTGGTTTCAATGGTTAGTGAAAAAGGCAGTATTTCCATCTTTGGGGAAGATTCAGGAACAAGAAAACAAACAGAACAGCAGATGAATATGTAAATGAAAATCTAATTACAACAAAAGTGTTACAGAGTACAAGAAATGGGAGAAAGGATAAAGGCGTGTGTTTAGGGCTGTCAGGCTGAGAGCTTTCTTGAAAGTGTGAGTTTTTGCCGGGCATGGTGGCTGACGCCTGTAATCCCAATACTTTTAGAAGCCAAGGCGGCTGGATCACGTGACGTCAGGAGTTCAGGAGACCAGCCTAGCTAACATGGTGAAACCTTGTCTCTAATAAAAATACAAAAATTGGCCGGGCGTGGCAGCACATGCCTGTAATCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCCAGAGGCAGAGGTTGTGGTGAGCTGAGATCGCACCACTGTACTCCAGCCTGGGAGACAGAGCAAGACCCCATGTCAAATATTAAAAAAAAAAGACAAGCCAGGCACAGTGGCAAACGCCCGTAATCCCAGCACTTTGAGAGGCCGAGGTGGGCGGATTACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACTCCATCTCTACTAAAAAAGCAAAAATTACCCAGGCATGGTGGCAGGCACCTATAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCGCCTGGGGGACAGAGTAAGACTCTGTCTCAAAAAAAAAAAAAAAAAATAGAGAGTGAGTTTTCATCTGAGACCTTAAGGATGAGAAAAGCAGCAAAAAGCCCAGGACAGGATTCTTGATAGATGGAAGAACCTGATGAGAGATCTGAGATGGAAAAGGCCTAGATTTATTTTACATGCTCATAGATGGCTGGTGGTTTTGTACACTGGGAGGAAAGGGGAGAATGTTCAATGTGAAGAGGCCCTGCTCTTGCTGAGACACAGTGGTGACAAAAACAAGCAGGGATCTGCTTTGCCAAGAGCCCTGTGAGCCATGGCAGTGAGTTTGTAATTCTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACCACAACCTCTGCCTCCCGGATTCAAGTGATTCTCCTGCCTCAGCCTCCCAGGTAGTTAGGATTACAGGCATGTGCCACCACGGCCGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTTCATGTTGGTCAGGCTGATCTCGAACACCCGACCTCAGGTGATCCACCCACCTCAGTCTCCCAAAGTGCTGTGATTACAGACATGAGCCACTGCACCCAGCCCTTTTTTTTTTTTCTGAGATGGACTCTCACTCTGTCTTCCAGGCTGGAGTGCAGTAGTGCCATCTTGGCTCACTGCAACCTCTGCCTCCTAGGTTCAAGTGATTCTTGTGTCTCGGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCATGCCTGCTAATTTTTGTATTTTTTAGTAGAGACAGGGTTTCTCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGCGATCCATTTGCCTTGGACTCCCAAAGTGCTGGGATTAAGGCATAAGCCACCTCGCCTGGCCTTTGGAATTAATTCTTAATGCACCGAAATGGGAAGGCAGTGAAATGTTTAAGCAGAGATTTTCATTTTGATGGACATCAACTTTATGTGGTGGGAAGTGTTGAAAATATAGATGCCTTATTTACATGAAATGTCCAGAATAGGCAAATTTATAGAGACAGAATTAGTAGCTCTGTGCCAGTAATGGTTGCCAGGGGCTGGAGGGAATAGGGAATGGGGAGTGACTGCTTAATGGGTGGGGGGGTTTCTATTTGGAGTGATAAAAATGTTCTCAGCCAGGCGAGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAGGGCGGGTGGATTGTTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAATATGGTGAAACCCCATCTTTACTAAAAATACAAAAATTAGCTGGGTGTGGTAGCAGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAAGAGGCGGAGGTTGCGTGAGCCAAGATTGTACCACTGCATTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAGCAAAAAACAAATTTAGAACCCCTGGCTTAATTTGTCTTCTTGCTCCCTTCTGGCACCATGTGAGCTCTTCACATGGTGTGCTTTCATCTGCTTTTTTGAAATTGCATAATATTTGAGATGTATATAAGGCATTCACTTTTTATGGTTATTTATTTTTGTCTCCCTGTTCTACTATAGTTTTTTTTTTTTTTTTTTTTTTTTATGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCGACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAACCTCCCTAGTAGCTGGGATTACAGGTGCCTGCCACCAAGTGTGGCTAATTTTTGTATTTTTAATAGAGACAGGGTTTCACCATCTTGGCCAGGTGAACTCCCGACCTTGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGATGTGAGCCACCGTGCCTGGCCTCTACTATAGAATTTTTTATTTCTCATAGAGAAGGATCACAGCTTGTATTTATCTTTTTCTTATTTTTCAG
Seq C2 exon
ACTTGGAGTCCAGGTGTGAGAAATTTCTACAAAAAGACATTTTTGAAATCGGGGCATTCAACTGGGAGATAATGGAAAGCCTTAAATGCAGTGACCTGGAGGGCTCCGATTTTAGAGCTGACTGGGAATGCGAAGGCCAGTTTGAGAGACAAGTCAATGAAGAGTGCTATTTTAAGCAAGTGAACGTCACCTATGGACATATGCCCGTGTTCCAGCATCACACGTCTCACACTGTACGTCAGAGCAGGGAGACTGGTGAGAAACTGATGGAATGTCATGAATGTGGGAAAGCATTTAGCCGTGGCTCACACCTTATTCAACATCAGAAAATTCACACTGGTGAAAAACCCTTTGGATGTAAGGAATGTGGGAAGGCCTTCAGCCGTGCCTCACACCTTGTTCAGCATCAGAGAATTCACACGGGTGAGAAACCTTATGACTGTAAGGACTGTGGGAAGGCCTTTGGTCGTACATCAGAACTTATTCTACATCAGAGACTTCATACTGGTGTCAAACCTTATGAATGTAAAGAATGTGGGAAGACCTTTAGGCAGCATTCACAGCTGATTCTGCATCAAAGAACTCACACAGGCGAGAAACCCTACGTATGTAAAGACTGTGGCAAGGCTTTCATTCGTGGCTCCCAACTCACTGTGCATCGGAGAATCCACACAGGGGCCAGACCCTATGAGTGTAAAGAATGCGGGAAAGCCTTTAGACAGCACTCACAGCTGACTGTACACCAGCGAATCCACACTGGTGAGAAACCCTACGAGTGTAAGGAATGCGGAAAGGGCTTTATTCACAGCTCAGAAGTTACTCGACATCAAAGAATTCATTCTGGGGAGAAACCCTATGAGTGTAAGGAATGTGGGAAGGCCTTCAGACAGCACGCACAGCTCACACGACATCAGAGAGTCCATACTGGCGACAGACCCTATGAATGTAAGGACTGCGGGAAGGCATTTAGTCGTAGCTCATACCTCATTCAACATCAAAGAATTCATACAGGTGACAAACCCTACGAATGTAAGGAATGTGGGAAGGCCTTTATTCGTGTTTCACAACTGACTCATCATCAGCGAATTCACACTTGTGAGAAACCCTATGAATGCAGGGAGTGTGGAATGGCCTTTATTCGTAGTTCACAACTTACCGAACATCAGAGAATTCATCCTGGTATCAAACCTTACGAATGTAGAGAGTGTGGGCAGGCATTTATTCTTGGCTCACAACTCATTGAACACTACAGAATTCATACTGGTTAGAAAGCCTTGAGTGTAAGGGATAAAGATAAGCCTTTATGTGGAGTTCACATCTGGCTCAGTACTAGGTAATTTTTAATGTAGTGTAATTAATGTCAGAAAACACCTGTCACTTCCATCATAGAACATCAGAAAACTCACACCCAAAGAAAATTAAATAAATGTGGGAATTCTT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000196357:ENST00000392173:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.048
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains