HsaINT0188380 @ hg19
Intron Retention
Gene
ENSG00000128000 | ZNF780B
Description
zinc finger protein 780B [Source:HGNC Symbol;Acc:33109]
Coordinates
chr19:40534167-40553377:-
Coord C1 exon
chr19:40553282-40553377
Coord A exon
chr19:40542534-40553281
Coord C2 exon
chr19:40534167-40542533
Length
10748 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGT
5' ss Score
10.86
3' ss Seq
GCCTTCTTCATTTCTTTCAGATT
3' ss Score
11.62
Exon sequences
Seq C1 exon
GAAGTTCCATTTCTAAGCCAGATGTGATTACATTACTAGAGCAAGAGAAAGAGCCCTGGATTGTTGTAAGTAAAGAAACAAGCAGATGGTATCCAG
Seq A exon
GTAAGTGAGAGTAAAGCAGGCAGGGGGAAGCCATCATTGTCCCGGACAGCCCATGTGCTCAGAGAGGAGTCACACCCCTGAGATGTGGTTTGGAAAACTTTCTTCAATAACCCAAGGTCCCCCACTGGACAAAAATGCCCAAGACCTGGGAAGGAAATAAGATCACTGTAGGAGCTGTCCCCAAGGAACTTCATCATTTACTAATCACCTAATTTCTGTTATTTTCTTCCTCTTTTAATGAAGTGAGCTTCCTCTTTCTTTCCCAGTGTAAACTTTAAACAGTTTTTAAAATTATTTTTTAAGAGGCAGCATCTTGCTATGTTGCCCCAGCTGATCTTGAACTCTTGGCCTCAAGTAGTCTTCCTGCCTCAACCTCCTAAGTAGCTGAAATTACAGGCATGAGCCAATGCTTCTGGCCCCCAGTGTAAACTTTTAACACGTATTTTGGATCCAGCTACTTTCCAACTCTGCTTTTGCATTTAGATTTCTACATGTGTTTTCACTAAGAAATGTATTCATGTTCAGTAAATATGTATAGAGTGCGCATTCCTAGAAGGCATATGCTTGGCTCTGGTCAATACTGTAATGTACAGGTAATGAACAAGACTGAGAAAGTCACTGCTGTCATGGACTTTACCAGCAGTTGGTGAGACATGCCTCAAACAAGTAAGCAAATGAATAGATAAGGAATACCAAATAATCATGCTATAGAGACAAGGAAATAGGAGTGATGGGGTGAGAATGGCAGCACTTGGGTGCTTAGGGTACCTGTCTGGAAGTGGGCTTGCTTGCATAGAGATGTGAAGTAAGTGTTCAAGTACTCTAGTCAGACTGAGCAGGAAACACAAAGGTGGAGTAAGTAATGGAACAGCGGGAAGAAAGGTCTGAGAGTTACGTCGGAGTCGTATCATACAGGGTTTTGACTGTCGTTGTGAGGAATGTGGGAAGTTCTTCAAGAGTTATTTATTCATTTTTAATTGATACCCAATATTTGTACATATTTATGGGATACATGTTATGTTTTGTTCCATGCATAGAAGGTGTAATGAACAAGTGTCAGGGTATTTGAGGTATCCATCAGATCCACCAGAGGAGGGTTTATCATTTCTTTCTGATAGGAACATTTCAAGTCTTCTAGCTATTTTGAAATATACAATACATTGTTGTTAATTAGAGTCACTCTACTCTGCTTATGAACATTAGAAGTCATTCCTCATATTTAACTGTATGTTTGTAACATTAACCAACTCCTCTTCATCCCCCACCCCTCACCCACACACCCTTCCCAGCCTCTGGTTTCTATCATTCTATTCTTTACCTCTGTGAGATCTTTTTTTAGCCTCCAGATATGAATGAGAACATATGATATTTGTCTTTCTTTTTTTTGAGTTGGAGTCTCATTCTTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCCCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTAGAGTAACTGGGATTACAGGTGCCTGCCACCACGCCTGGCTAATTTTTGTATTTTTAATAGAGACAGGGTTTCACCACATTGGCCAGGCTGGTCTCAAATTCCTGACCTCAGGTGATTCACCCACCTCGGCTTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCCAGTCTGATATTTGTCTTTCTGACCTCCGATTCCCTCCATGTTGCTGCAAATGACATGATTTCATTTTTTAAATGCCTGAATAGTATTCCATGTGTATATATCACATTTTCTTTATCTGTTTGTCTGTTGGGGGACACTTAGGTTGATTCCATACCTTTGGTATTTTGAATAATGCTACAGTAATCATACAAGTGCAGGTATCATTTTGATATACTGATTTTATCTTCCTTTGGATTAATACCCAGTAGTGGGATTGTTGGATCATATGGTAGTTCTATTTTCAGGTTTTTGAGAAATCTGCATGCTGTTTTCCATAGTGATTGTACTAATTTATATCCCACCAACAGTATATAAGAGTTCCCTTTTTCCCTCATCCTCTCAGGTATGTTTAAACCCAATGTTTCTTTGTTAATTTTCTCTCTAGATGATCTAATTCTGAGAGTGGCACAGTGACGTCCCCAGTGATTATTATACTGTAGTATCTCTCTCCCTTTTGCTCTAATAATATTTGCCTTATATATCTGGGTGTTCTGGTGTTGGTGTTATATGTTTAGAATTGTTATATTCTCTTGCTGAATTGATCCCTTTATCATTATATGATGACCTTCTTTGTCTCTTTTTGCTGTTTTTTACTTAAAATCTGTTTTTTTCTGATATAAACGTAGCTATTTCTACTCACTTTTGGTTTCCATTTGTATGGAATATCTTTTCCTGTTCTTTTACTTTCAATCCATATGTGTCTTTACCAGTGAGAAGAGTTTCTTGTAGGCAGCTTATAGTTGGATCATGTTTTTTCATCCATTCAGCCCGTCTGTATCTTTTAAATGAAGTTTAATCCATTGACGTTCAGTGTGATTACTGATATGTGAGGGCTGATTCTTATCATTTTATTAATTGATTTCTAGTTGTTTTGTTTATCCTTTGTTCCTTTCTCTTTTATTTTTTATCATTGTGGTTTGGTTGTTTTCTTTAGGGGTAACATTTGAGTCCTTTGTCCTTATTTGTATGTTTGCTGTGTCAGTAGGTTTTATACTTTTGTGTGTTTTCACAATGGTAGATATTGTCCTTTCACTTCTAGGTGTAGGACTCTTGAACATATCTTGTAGGGTTGGTCCAGTGGTGATGAATTCTGTCACCTTTTGCTGTCTGGGAAAGACTATTTCTTTTTCATTTTTGTAGAATACTTTGCTGAGGATAGTGTCCTTGACTGGTGATTTTTTTCTTTCAACACTGAATGTATAATCACATTCTCTCTCATTTCTCTCTGTTGAGAAATCTGCTGTTAGGCTGATGAGAGTTTCCTTGTAAGTGACTAGATGCTTTTCTCTTGCTGTTTTTAGTATTCTCTTTTGTCTTTGACTTTTATATTTTGACCATAATATGCCATGGAGAAGACCTTTTTGTATTGTATCTATTTGGGTATCTCTGAGCTTCCTGTATCAAGATGTCTGCATCTCTTACTAGAGTTGGAAAGTTTCCTGCTATTATTTCATTAAATAGATTTTCTATCCTTTATGTTTTCTCTTTGTCTCTAGGACCTCAAAAATTCAAATATTTTGTTGTTTTATGATGTCCCATATGTTACGGTGGCTTTATTCATTCATTCAGATGTTCTGAGGAAAACATTTATCCTAAGGCTTAAAAGATGAGTTAGAGGGGTGGAACCAAGATGGCCGAATAGGAACAGCTCCGGTGTACAGCTCCCAGCATGAGCGATGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGCATGCAGGACAGTGGGTGCAGCGCACTGTGTGCAAGCCAAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGTGCAAGGGGTCAGGGAGTTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGATGGCACCTGGAAAATCGGGTCACTCCCACTCTAATATTGTGCTTTTCCAATGGGCTTAAAAAACGGCACACCAGGAGATTATATCCCGCACATGGCTCGGAGGGTCCTATGCCCACAGAGTCTCACTGATTGCTAGCACAACTGTCTTGAGATCAAACTGCAAGGTGGCAGCAAGGCTGGAGGAGGGGCGCCTGCCATTGCCCAGGATTAGGTAAACAAAGCAGCCGGGGAGCTCAAACTGGGTGGAGCCCACCACAGCTCAAGGAGGACTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGGAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAAGTGTTTCCCTGACCCCCGAGCAGCCTAACTGGGAGGCAACCCCCAGTAGGGGCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCGGGTCACCAATATCCACTGTTCTACAGCCACCACTGTTCTGCAGCCACTGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCTAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAAACCCATCTGTACGTCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCAGAAAAACTGGAAACTCTAAAAAGCAGAGTGCCTCTCCTCCTCCAAAGGAATGCAGCTCCTCACCAGCAATGGAACAAAGCTGGACAGAGAATGACTTTGACAAGTTGAGAGAAGAAGTCTTCAGACAATCAAACTACTCCGAGCTACAGGAGGAAATTCAAACCAATGGCAAAAAAGTTAAAAACTATGAAAAAAAATTAGACGAATGGATAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGAGCTGATGGAGCTGAAAGCCAAGGCTCGAGAACTACATGAAGAATGCAGAAGCCTCAGGAGCTGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGACAAAATGAATGAAATGAAGTGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTCATTGGTGTACCTGAAAGTGACGGAGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCCAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAATGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAACGTTAAGGGCAGCCAGAGAGTAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAAACTAACAGCGGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTGAAAGAATTTTCAACCCAGAATTTCATTCCAGCCAAACTAAGTTTCATAAGTGAAGGAGAAATAAAATCCTTTATAGACAAGCAAATGTTGAGGGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTGCCAGCCACTGCAAAAACATGCCAAAATGTAAAGACCATCAAGGCTAGGAAGAAACTGCATCAAGTAATGAGCAAAATAACCAGCTAACATCATAATTACAGGACCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGGCTAAATTCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCACCTCACATGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGAAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGCGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTGCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATCAGACAGATCAACGAGACAGAAAGTTAACAAGGATACCCAGAAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGATATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGGGCAATCAAACCAGAACTCAGGATTAAGAAACTCACTCAAAACCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAGTGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACAAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTATGTAGAGGGAAATTTATGGTACTAAATGCTCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAACTAGAAAAGCAAGAGCAAGCACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTCTTTTGAAAAGATCAACAAAATTGAAAGACCATTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACACAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAAGATCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTAAAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTTTGAGGCCAGCATCATCCTGATACCAAAGCTGGGCAGAGACACAACGAAAAAAGAGAATTTTAGACGAATATCCTTCATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTTTCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAAAATTCATGCTAAAAACTCTCAATAAATGAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTGTTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTTTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACCAACAGAGAGCCAAATTATGAGTGAACTCCCATTCACAATTGCTTCAGAGAATAAAATACCTGGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCATGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCCGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGTTACCAAAACAGAGATATAGATCAATGGAACAGAGCAGAGCCCTCAGAAATAATGCTGCCTATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTGGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTTATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCCATCAAAAAGTGGGCGAAGGATGTGAACAGACGCTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGGCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGTGTATATACCTAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGTCTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATCATTCTCAGCAAACTATCACAAGGACAAAAAACCAAACACCACATGTTCTGACTCATAGGTGGGAATTGAACAATGAGAACATATGGACACAGGAAGGGGAACATCACACTCCGGGGAATGTTGTGGGGTGGGAGGAGGTGGGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAAAATTTAAAGTATAATAATAATAAAATTAAAAAAATATATATATATAAACAGAAAAAAAAAAAAGAGGAGTTGGATGTTTGTTACAAAGAGCAAAGCCAGACGATTCTTGGAAGATGAAGCAGTCTAAGCAAGCAAGAAGATAAGAGAAAGGTTATATCATGTTCTGGTTGCTAAAAGGAGGGAGTGGTTAGAGATCAGCCACAAAGGAGGACAGTGCCCTGATAGGAAGTTTTGTTCTCTGTGTTAAGGTTTTTGGATTTTGTGCTAAGACTAAAGATAAACCATTCAAAACCAGTTTTAAGTATGATCTGTAAACTTTGATCTGAATCAGAATCATCTGGTAGAGATATTAAAAATACAGCTTTGGCTGGGTGTGATGGCTCCCACTGGTGATCACAGCATGTTGGGAGATCAAGGCAGGAGGATTGCTTGATGCCAGGAGTTCAAGACCAGCTTGGGTAACATGGTGGGACACCATCTCTACAAAGTAAAAATAAAAATAAAGTAAAAATTAGCCAGACTTTGGACTGCAGGAAGACTAAAGAAAAAGAAATTGTCCAGACTTAGTGGCATGTGCCTGTAGCTGTAGCCACTTGGGAGGCTTAGGCAGGAGGATTGCTTGAGCCTGGGAGTTTGAGGCTGCAGTGAGCTGTGATCATGCCATTGCACTATAGCCTATGCAACAGAGAGAGACCCTGTCTCTTAAAAAAAAAAAAAAAAAATAGAGGCCAGGCACAATGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAGGGTGGGTGGATCACCTGATGTTAGGCATTCCAGACCAGCCTGGCCAACATTGTGAAACCTCGTCTCTACTAAAAATACCAAAATTAGCCAGGCACGGTGGCAGATGTTTGTAATCCCAGCTACTCTGGAGGCTGAGGCTGAGGCCAGAGAATCACTTGAACCCAGGAGGTAGAGGGTGCAGTGAGCTGAGATTGTGCCATTGCACTGCAGCCTGGGCGACAAGAGTGAAACTTCGTCTTAAAAAAAAAAAAAAAGCTTTCTTCACTAAAAATTCTGATTCTGTACATCTGAGTTGCTTGAATATCAATATATTTAATCTTACCAAATGGTTTTGATTCACACCTAAATTTGACAAAGTTAACCTGTTCCCTTATGCACACCACCATCTTACATAAATTCATTATTGGCACCCTTTTCCTTTTTCAGATCCCTTCCCTGAAAGTATTATATTTTATACTTAGGCCATTTGTTTAATGGATTTTGTATGCATGTATGTTATAGGAAAATAAAATAGGTTTGCCTTCTTCATTTCTTTCAG
Seq C2 exon
ATTTGGAGTCAAAATATGGACCTGAGAAAATATCTCCAGAAAATGATATTTTTGAAATAAATTTACCCAAACATGTTATAAAGCAAATAAGTAAAACACTTGGCCTCGAGGCCTTTTATTTTAGAAATGACTCAGAATATAGAAGTAGATTTGAGGGACGACAGGGACATCAAGAAGGATATATCAACCAGAAGATCATCAGCTATGAAGAAATGCCTGCTTATACTCATGCTTCTCCTATTCATAATACACATAAACCATATGAATGTAAGGAATGTGGGAAATACTTTAGTTGTGGTTCAAATCTTATTCAGCATCAGAGTATTCATACTGGAGAGAAACCCTATAAATGCAAAGAATGTGGGAAAGCCTTTCAACTTCACATACAACTTACTCGACATCAGAAATTTCATACTGGTGAGAAAACTTTTGAATGTAAGGAATGTGGAAAAGCCTTTAATCTTCCCACCCAGCTTAATCGCCATAAGAACATTCACACAGTTAAGAAACTGTTTGAATGTAAGGAATGTGGGAAGTCTTTTAATCGTAGCTCAAACCTTACTCAGCATCAAAGTATTCATGCTGGTGTAAAACCATATCAATGTAAGGAGTGTGGGAAAGCCTTTAATCGTGGTTCAAATCTTATTCAGCATCAAAAAATTCATTCCAATGAGAAACCCTTTGTATGTAGGGAATGTGAGATGGCCTTTCGATATCATTACCAACTCATTGAACATTGCCGAATTCATACTGGCGAGAAACCCTTTGAATGTAAAGAATGCAGAAAGGCCTTTACTCTTCTGACAAAGCTTGTTCGACATCAGAAGATTCATATGGGTGAGAAGCCCTTTGAATGCAGGGAATGCGGGAAGGCCTTTAGTCTCCTCAATCAGCTTAATCGCCATAAGAATATTCACACAGGTGAAAAACCATTTGAATGTAAAGAATGTGGGAAGTCCTTTAATCGTAGTTCAAACCTTATTCAACACCAGAGTATTCATGCTGATGTAAAACCATATGAATGTAAGGAGTGTGGGAAAGGCTTTAATCGTGGTGCAAATCTTATTCAGCATCAAAAAATTCATTCCAATGAGAAACCCTTTGTATGTAGGGAATGTGAGATGGCCTTTCGATATCATTACCAACTTATTCAACATTGCCAAATTCATACTGGTGGGAAACCCTTTGAATGTAAAGAATGTGGAAAGGCCTTTAGTCTTCTGACACAGCTTGCTCGACATAAGAACATTCATACTGGTGAGAAACCATTTGAATGTAAAGACTGTGGGAAGGCCTTCAATCGTGGCTCGAACCTTGTTCAACATCAGAGTATTCACACTGGTGAGAAGCCCTATGAATGTAAGGAGTGTGGGAAGGCTTTTAGACTTCACCTACAACTTTCTCAACATGAGAAAACTCATACAGGTGAGAAACCCTTTGAATGTAAGGAATGTGGGAAATTCTTTCGTCGTGGTTCAAATCTTAATCAACATCGAAGTATTCATACCGGAAAGAAACCCTTTGAATGTAAGGAATGTGGGAAAGCCTTTCGACTTCATATGCACCTTATTCGACATCAGAAATTTCATACTGGTGAGAAGCCCTTTGAATGTAAGGAATGTGGCAAGGCCTTCAGTCTTCACACCCAGCTTAATCACCATAAGAACATTCACACAGGTGAGAAGCCATTTAAATGTAAAGAATGTGGGAAGTCCTTTAATCGTGTCTCAAACCTTGTTCAACATCAGAGTATTCATGCTGGTGTAAAACCATATGAATGTAAGGAGTGTGGGAAAGGCTTTAGTCGTGTTTCAAACCTTATTCAGCATCAGAAAACTCATTCCAGTGCGAAACCCTTTGTATGTAAGGAGTGTAGGAAGACCTTTAGATATCATTACCAGCTTACTGAACATTACCGAATTCATACTGGTGAGAAACCCTTTGAATGTAAAGAATGCGGAAAGGCCTTTGGTCTTCTGACACAGCTTGCTCAACATCAGATCATTCATACTGGTGAGAAGCCATTTAAATGTAAGGAGTGTGGGAAGGCCTTTAATCGTGGCTCAAACCTTGTTCAACCTCAGAGTATTCATACTGGTGAGAAACCCTATGAATGTAAGGAGTGTGGGAAGGCTTTTAGACTTCACCTACAACTTTCTCTGCATCAAAAACTTGTACAGGTGAGAAACCCTTTGAATGTAAGAAATGTGGGACAGCCTTCAGACATCAGTAGCAACTTACTGAACATCAGAAAATTCATACTTGGGTGAAAACCTTTGAATGTAAGGAATGTGGGAAGGCCTTTCAATATCATTACCAATTTCATGGACATTATAGATTTCATATTCGTGAGAACCCTTATGAATGTCAAGGATGTGGGAAATGCTTTACCAGTGGTAGAAACCTTAGAGTACATCAGAGAATTCATACTGGTGAGAAACCATATCAATGTGAAGAATGTGGGAAAGCCTTTAGTCATAGTTCAAACCTGTTAAACATGTTAAAATTCATACTGATGAGAAACCCTATGAATGTAAGGAATGTGAAAAGGCCTTTAGCAGTAATTATGATCTTACTGTACATCTGAGAATCCGTACTGCTGAGAAACCCTGTGAGTGTAAAGAATGTGGAAAACTTTTGGATTTAGCTTAGTCTTTACTGCACATCAAAGAATTCATACTGGTATGAACCGTATGAATGTAAAGAATGTGGAAAGACCTTTACTTGTAGCTCGAGCCTTGTTCAACATGTTAAAATTCATACTGGTGAGCAACCCTGTGAATGTAAAGGATGTGGGAAGACCTTTAGACTTAGTTCAGTCCTTTCTGCACATCACAGAATTCATACTGGCATGAAACCCTATGAATGTAAAGAATGTGAGCAAACCCTTACTGTGAATGATCTGCTTACGCAACATCAGAAAATTCATTATAGTTAGAAGTTTTATGAATATAAGGAGTGTAGACAAGCCTTCACTGTGTATGAAAAATTTACTCAACACCAGAGAATTCATATTGATGAGAAATCCTGTGAACATAAAAGAATGTGTGAAGAACTTTCATCGTGGCCTGGGATTTGCTCAACATCAGAGTATTCATACTGCTGAGAACTCCTTTGAGTGTAAAGAATGTGGGATATTTTATAGCCACACTAAATGCCTTAGAGTTCAGAGAAGATAATTTTGGTGAGAAAGTTACTGATGTGAGGAATGTAGAGTAGCTGCCATGTTCACAGTTTACTGCCCGTGAAATATTTTACTGGATACAGGCGTACCTTGCTTAATTGTGCATTGCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATAAGTCTATCAGCACCATTTTCCAAACAGCATATGCACATTTCATGTCTTTGTGTCACACTTTGCTAGTTTTCATAATATTTCAAACTTTTTCATTGTTAAATCTGTTATGGTGATCTGTGACCAGTGTTTTTTGATTACTAGTGTAATTGTTACTAGTGTAATTGTTTGGGGATACCACAAATCCTGCCCATAAAAGATGGTGAACCTAGTTGATAATTGTTGTGGGTTTTGAAAGAATAGTAAAATATATACACATATCCCCCCCACCTAGATTCAAAATTGTTAACAATTTGCCACATTTATTTTTTGTATATTTGTTGTACCATTGAGAATAAGTTTTAGACCATTGAGAATAAGTTTTAGATATCATGACACTTTACTCCTTGTTACATCAGCATGTGTGTTACCCAAACATAAAGACAATATCATATAACCATAGTACCATAATTACCCTTAAGGAAAATATTCATAATTCTGTAATATCATTCCATCTTCAGATTTCTTCCTTGGCCTGCAAACCATCTTTTACAGCTATTCATTTTCTCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGACTGGAGTGCAGTGGTGCGATCTGGGCTCACTGCAAGCTCTGCCTCCTGGGTTCACGCCATTCTCCCGCCTCAGCCTCCTGAGTAGCTGGGACTAGAGGCACCCGCCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACTCTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCAGCATGCCTGGCCTACAGCTATTCATTTTCTAAGGAGAGTCCATTGCAGATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCCCATGAAAGTATGCTCTCAAATTATGGTGGGTATCAGAATCCCCTGTGGAACTTAGTAAACCTACAGAAGTGTAGCCCTAGTTTATAAGCCTGGGCCTCTGTTTTTTATTATTTCTCCAGGTTTTGTGTCTGTGATACCAACCAGAGTTAGAGAGCCACTGGTCTAGAACATTTCTCATTTTAAAAAAATGACATTGAATTTTGAGTAGCCCAGAAATGTTGTTGGCTATGTGTTTAGATTTCTTTCTTTATAGTGTCATTTAGCCTTGTTCTTGGTTGTATTTTCTTTACAAGGGAAAGTAAGTCCAGAGGCTTTCTTAGGTCTAGATTAAACGTTTTGGGGAAGAATACTTTGTAGGTTATTTCTATGTCATATTGTACTGTCAGAAAACATTTAAGTACAGGTCCTTGCATTAGTGAAACTAAGGATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGTTTGTAGTGGGTAAGTAATCTATGGAGAGACGTTGTCATCTCTGAAAAGTTATAGTCACGTGTACTTAAGCCCTGGATTGAATACAAAATGAAAATTGAAATAGACTATTGAGAAATGAATGCCATTAAAGCGTCAACATAATTCAACTTGTGTGATATGGCTGACACTGTACTCAGTACAAAACTGGCACCCTTTGGATTGTATAGGGAGCCAAGATTGTCCGGAACCTCTTTTTTGTTCAGCATTTATCACCAGCACCTATACCATGGCTGGTACATGAGCTGTTGATAAAAATTTGAAAAAATATTAACCCTTTAAATCAAGCTGTAAAACATGATACCATTAAGCCGGGAGCAGTGGCCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAACTTGGCCAACATGGCAAAACTCCATCTCTCCTAAAAATAAAAAAATTAGCTGGACATGGTGGTGCATTCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTCGAAATTGGAAGGTGGAGGTGGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCGACAAAGTGAGACTTCATCTCAAAAAAACCCCAAAACAAAACATGATACCGATGTGGCATCATGAATTAGATTAAATTTTTTTTAAGATTAAGAATAATCCTTTGTGATTTTATTCCATTGTGTTGAAAAATCTATAAAGTGATAATTTATATTGATAGCTTTCTTCTTTTTATGAATATACCCTGGTCAGATGATTATTCTTTCAATAGACTACTTAATTCTATCTTTTACCATTTAATTGCATCTATAATCATAAGTAAAGTTATAATTTTCCAAGTATTTTTCAGGTATTGATATTGCAATGATGTTATACAACTTATAAAACAAGATTATATAAAACTTGGCTTTCAAATCTTATGTTCCTATTTTTTATTTCCAGTTTCATCTTTTTTCTATCCATTCTCTTGAACTTTCTTCTTTGAAATCAGCAGAGTCCCTGGGTATTAACCTAGCACAACTCCTTTCTGGGTCATTGCACATCCCGGTAGTATCATTAAGAGTTGTCAGAAAGATCCCTGGCAGCCTTTCGGTGAAACTCTATCATCATGCAATCATGGCAGTACTATGTTGGAAGTCAGAGTCCCTTTGCAAACATAATAAAACACTTTAATATATTTGTTAAAGTTACAAACCAAGTATGTACAAATTTAAAAATCACGGCCAGGCACGGTGGCTCACGCCTGTAATCCCCAACTTAAAATGGTTTGACTTATAATTTTCAGCTTTATAATAGTACAAAAGTGATATGCTGCTATAGTTTGGATATTTATCCCCTCCAAATCTCATATTGAAGTTTGATCCCAATGTTGGAGGTGGGGCCTAATGGGAGGTGTGTGGGTCATGGGAGAAGATCCCTCATGAATAAATTAATGTCCTCTCTGGATTGGGGGGTGAATTATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTCCTTCCTCACCCTCTTGCTTCCTCTCTTGCCATGTGATGTCTGCATACACTGCCCCCTTTCATCTGCCATGAGTGGAAGCAGCCTGAGGCCCTTACCAGAAGCAGATGTTGCACCATGATTCTTGTAAATCCTACAGAACACTGAGCCAAATAAACCTCTTTCTTTATTAATAACCCAACCTCAGACATTCCTTTATAGCAACACAAAACTAAGACATACTCAGTCAGAGTATGCTCCTTGACTTAAAATGGGGCTATATCTAGATAAACCCATTGTTAAATTGAAAATATTGTAGACCATAAATGCACATATGGTGTATGATGTTTTCAATTTATGATGGGTTTATTTGGACATAACTCCCCGTAAGTTGAGAAGCACCTGTAGTAATTATTATTATTTATGCTCAAATTGACATAATGTGGCCAGTAGGAATCCATTTACATTTTTTTTTTACTACTTATTTTTTTCTTTTGATGTTTTAAAGGAATATTGTTTTCAGGCCGTAAGAGGATGTTTAAGACTGACCCTGTTTGTTGGTTCATGTCCCCCATGCCTCTTGTCCTGAGTCATGGAATCAACTCATGATTTAATACCCTCTTATCTTAGGGAGTCCTGGTTCCTTTTAGAGGAAAAAAGAATTAGAGACCAAAAAATCTGGCTGCTGTGAGTGCACATGGCAGTTACAGGTATGGAAAAAAAGATGCTGCTTTTGTTAGAATTCTTTTAATAGTTTCAGAGTTGAAAATGTCATCCTAAGGTCAGAAGTTCCCTCTGAATTTTCTCAACTTACATTTCTATGATCTGCTCTTGTTTGCATTTGGTATTTTATTGAATTATGTTTTATGTATGGTGATAGCTGAGAAGTTTATCTCCTTTTAAGGCCTGGCTGAAATGATACATTAATCTGCCTCCCATTTTTGGAGATATTGCTCTGATTTAAATTTGTCATGGTGTTTCTGAGCAGCGTTGTAAAGAAACTTGTTTTAGAATATTCAGTCATGGATGTTATCTTGAATGTTCATAGACTCCCCAGAAAAGAAGAAAAAGTAGACACAAGATTTCTGTCATCCTTTTACAGGGTATTGTGATCATCCAGCTTGGGGTATGAGGGATAACGGACCTGTGTGTCTTAATTTCCAGAATACCATTCCATTTCAATGAGTCTTCTGCACAAGTTGTGGTCTCAGGGATTCACTGTCTTCATTTGTAATTGATCAAAATGAAACCATCTCCAGGATTCCTCAGTGGGTCAGGATCTGTTATTTATTAGGCCCGCATATCCATTCTACCCTGCTTTCATGATTATAGAACCAGTAATTTTTATTGATAGTTGGCTGTGACTATCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATGGCAAGTAGGATGTAAGTGAATATTTTGGCAATTCTGGAAACCTCTTAAAACAAACTAGCTTAATATATTAATATTTGAGAAATCTGGGTGAAGGGTAACCAGAATTATTTACTATTCTTCCAAGTTCTGTATAAGTCTGAGTGCTCATTCCATTCTGATGCCAGAATGGTAAAATTCATGATTGGTTTAGAGCAAGGCCACAGTATCAGGCTTACATCCATATTATATGACAGAGAAATTAACTTTTATTATATTTTATCCACTTTAATTTGGGGCAGTTTTACTATTTTACTCACAACCAAATTTAATCTTAAACGCTACAACTAGATTGTCACATGTAAAAAGTAATAACCATCATTATATCTTTTATGTTCTGTAATTCCAAAGCACGGATCTGTAGAGAACAGAGTGTCTATCCCATGCATGTTGTCATGTACTTATCCCACACCCTATTGAAATCACAGTACCCATAAGGGAGACATTTTTTTTCTTCAAGAATATGTATTTCTGCCACATCTATGATTCTCCAGAATGAGATGACAGAAAATGCTAAACTATTGTTAAATGACTATATGTAGTTCCACTTCTGGATGGTAGATGGGGGGGCTCTGCAAACTCATTTTCTAATAAAACTGGCAAAAAAAAATGTA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000128000-ZNF780B:NM_001005851:4
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.021
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.3),PF0009621=zf-C2H2=WD(100=3.0),PF0009621=zf-C2H2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF0009621=zf-C2H2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF0009621=zf-C2H2=WD(100=3.0),PF054957=zf-CHY=WD(100=11.1),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=2.6)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)