HsaINT0188380 @ hg38
Intron Retention
Gene
ENSG00000128000 | ZNF780B
Description
zinc finger protein 780B [Source:HGNC Symbol;Acc:HGNC:33109]
Coordinates
chr19:40033579-40047470:-
Coord C1 exon
chr19:40047406-40047470
Coord A exon
chr19:40036627-40047405
Coord C2 exon
chr19:40033579-40036626
Length
10779 bp
Sequences
Splice sites
5' ss Seq
GTTGTAAGT
5' ss Score
8.3
3' ss Seq
GCCTTCTTCATTTCTTTCAGATT
3' ss Score
11.62
Exon sequences
Seq C1 exon
GAAGTTCCATTTCTAAGCCAGATGTGATTACATTACTAGAGCAAGAGAAAGAGCCCTGGATTGTT
Seq A exon
GTAAGTAAAGAAACAAGCAGATGGTATCCAGGTAAGTGAGAGTAAAGCAGGCAGGGGGAAGCCATCATTGTCCCGGACAGCCCATGTGCTCAGAGAGGAGTCACACCCCTGAGATGTGGTTTGGAAAACTTTCTTCAATAACCCAAGGTCCCCCACTGGACAAAAATGCCCAAGACCTGGGAAGGAAATAAGATCACTGTAGGAGCTGTCCCCAAGGAACTTCATCATTTACTAATCACCTAATTTCTGTTATTTTCTTCCTCTTTTAATGAAGTGAGCTTCCTCTTTCTTTCCCAGTGTAAACTTTAAACAGTTTTTAAAATTATTTTTTAAGAGGCAGCATCTTGCTATGTTGCCCCAGCTGATCTTGAACTCTTGGCCTCAAGTAGTCTTCCTGCCTCAACCTCCTAAGTAGCTGAAATTACAGGCATGAGCCAATGCTTCTGGCCCCCAGTGTAAACTTTTAACACGTATTTTGGATCCAGCTACTTTCCAACTCTGCTTTTGCATTTAGATTTCTACATGTGTTTTCACTAAGAAATGTATTCATGTTCAGTAAATATGTATAGAGTGCGCATTCCTAGAAGGCATATGCTTGGCTCTGGTCAATACTGTAATGTACAGGTAATGAACAAGACTGAGAAAGTCACTGCTGTCATGGACTTTACCAGCAGTTGGTGAGACATGCCTCAAACAAGTAAGCAAATGAATAGATAAGGAATACCAAATAATCATGCTATAGAGACAAGGAAATAGGAGTGATGGGGTGAGAATGGCAGCACTTGGGTGCTTAGGGTACCTGTCTGGAAGTGGGCTTGCTTGCATAGAGATGTGAAGTAAGTGTTCAAGTACTCTAGTCAGACTGAGCAGGAAACACAAAGGTGGAGTAAGTAATGGAACAGCGGGAAGAAAGGTCTGAGAGTTACGTCGGAGTCGTATCATACAGGGTTTTGACTGTCGTTGTGAGGAATGTGGGAAGTTCTTCAAGAGTTATTTATTCATTTTTAATTGATACCCAATATTTGTACATATTTATGGGATACATGTTATGTTTTGTTCCATGCATAGAAGGTGTAATGAACAAGTGTCAGGGTATTTGAGGTATCCATCAGATCCACCAGAGGAGGGTTTATCATTTCTTTCTGATAGGAACATTTCAAGTCTTCTAGCTATTTTGAAATATACAATACATTGTTGTTAATTAGAGTCACTCTACTCTGCTTATGAACATTAGAAGTCATTCCTCATATTTAACTGTATGTTTGTAACATTAACCAACTCCTCTTCATCCCCCACCCCTCACCCACACACCCTTCCCAGCCTCTGGTTTCTATCATTCTATTCTTTACCTCTGTGAGATCTTTTTTTAGCCTCCAGATATGAATGAGAACATATGATATTTGTCTTTCTTTTTTTTGAGTTGGAGTCTCATTCTTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCCCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTAGAGTAACTGGGATTACAGGTGCCTGCCACCACGCCTGGCTAATTTTTGTATTTTTAATAGAGACAGGGTTTCACCACATTGGCCAGGCTGGTCTCAAATTCCTGACCTCAGGTGATTCACCCACCTCGGCTTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCCAGTCTGATATTTGTCTTTCTGACCTCCGATTCCCTCCATGTTGCTGCAAATGACATGATTTCATTTTTTAAATGCCTGAATAGTATTCCATGTGTATATATCACATTTTCTTTATCTGTTTGTCTGTTGGGGGACACTTAGGTTGATTCCATACCTTTGGTATTTTGAATAATGCTACAGTAATCATACAAGTGCAGGTATCATTTTGATATACTGATTTTATCTTCCTTTGGATTAATACCCAGTAGTGGGATTGTTGGATCATATGGTAGTTCTATTTTCAGGTTTTTGAGAAATCTGCATGCTGTTTTCCATAGTGATTGTACTAATTTATATCCCACCAACAGTATATAAGAGTTCCCTTTTTCCCTCATCCTCTCAGGTATGTTTAAACCCAATGTTTCTTTGTTAATTTTCTCTCTAGATGATCTAATTCTGAGAGTGGCACAGTGACGTCCCCAGTGATTATTATACTGTAGTATCTCTCTCCCTTTTGCTCTAATAATATTTGCCTTATATATCTGGGTGTTCTGGTGTTGGTGTTATATGTTTAGAATTGTTATATTCTCTTGCTGAATTGATCCCTTTATCATTATATGATGACCTTCTTTGTCTCTTTTTGCTGTTTTTTACTTAAAATCTGTTTTTTTCTGATATAAACGTAGCTATTTCTACTCACTTTTGGTTTCCATTTGTATGGAATATCTTTTCCTGTTCTTTTACTTTCAATCCATATGTGTCTTTACCAGTGAGAAGAGTTTCTTGTAGGCAGCTTATAGTTGGATCATGTTTTTTCATCCATTCAGCCCGTCTGTATCTTTTAAATGAAGTTTAATCCATTGACGTTCAGTGTGATTACTGATATGTGAGGGCTGATTCTTATCATTTTATTAATTGATTTCTAGTTGTTTTGTTTATCCTTTGTTCCTTTCTCTTTTATTTTTTATCATTGTGGTTTGGTTGTTTTCTTTAGGGGTAACATTTGAGTCCTTTGTCCTTATTTGTATGTTTGCTGTGTCAGTAGGTTTTATACTTTTGTGTGTTTTCACAATGGTAGATATTGTCCTTTCACTTCTAGGTGTAGGACTCTTGAACATATCTTGTAGGGTTGGTCCAGTGGTGATGAATTCTGTCACCTTTTGCTGTCTGGGAAAGACTATTTCTTTTTCATTTTTGTAGAATACTTTGCTGAGGATAGTGTCCTTGACTGGTGATTTTTTTCTTTCAACACTGAATGTATAATCACATTCTCTCTCATTTCTCTCTGTTGAGAAATCTGCTGTTAGGCTGATGAGAGTTTCCTTGTAAGTGACTAGATGCTTTTCTCTTGCTGTTTTTAGTATTCTCTTTTGTCTTTGACTTTTATATTTTGACCATAATATGCCATGGAGAAGACCTTTTTGTATTGTATCTATTTGGGTATCTCTGAGCTTCCTGTATCAAGATGTCTGCATCTCTTACTAGAGTTGGAAAGTTTCCTGCTATTATTTCATTAAATAGATTTTCTATCCTTTATGTTTTCTCTTTGTCTCTAGGACCTCAAAAATTCAAATATTTTGTTGTTTTATGATGTCCCATATGTTACGGTGGCTTTATTCATTCATTCAGATGTTCTGAGGAAAACATTTATCCTAAGGCTTAAAAGATGAGTTAGAGGGGTGGAACCAAGATGGCCGAATAGGAACAGCTCCGGTGTACAGCTCCCAGCATGAGCGATGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGCATGCAGGACAGTGGGTGCAGCGCACTGTGTGCAAGCCAAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGTGCAAGGGGTCAGGGAGTTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGATGGCACCTGGAAAATCGGGTCACTCCCACTCTAATATTGTGCTTTTCCAATGGGCTTAAAAAACGGCACACCAGGAGATTATATCCCGCACATGGCTCGGAGGGTCCTATGCCCACAGAGTCTCACTGATTGCTAGCACAACTGTCTTGAGATCAAACTGCAAGGTGGCAGCAAGGCTGGAGGAGGGGCGCCTGCCATTGCCCAGGATTAGGTAAACAAAGCAGCCGGGGAGCTCAAACTGGGTGGAGCCCACCACAGCTCAAGGAGGACTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGGAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAAGTGTTTCCCTGACCCCCGAGCAGCCTAACTGGGAGGCAACCCCCAGTAGGGGCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCGGGTCACCAATATCCACTGTTCTACAGCCACCACTGTTCTGCAGCCACTGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCTAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAAACCCATCTGTACGTCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCAGAAAAACTGGAAACTCTAAAAAGCAGAGTGCCTCTCCTCCTCCAAAGGAATGCAGCTCCTCACCAGCAATGGAACAAAGCTGGACAGAGAATGACTTTGACAAGTTGAGAGAAGAAGTCTTCAGACAATCAAACTACTCCGAGCTACAGGAGGAAATTCAAACCAATGGCAAAAAAGTTAAAAACTATGAAAAAAAATTAGACGAATGGATAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGAGCTGATGGAGCTGAAAGCCAAGGCTCGAGAACTACATGAAGAATGCAGAAGCCTCAGGAGCTGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGACAAAATGAATGAAATGAAGTGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTCATTGGTGTACCTGAAAGTGACGGAGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCCAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAATGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAACGTTAAGGGCAGCCAGAGAGTAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAAACTAACAGCGGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTGAAAGAATTTTCAACCCAGAATTTCATTCCAGCCAAACTAAGTTTCATAAGTGAAGGAGAAATAAAATCCTTTATAGACAAGCAAATGTTGAGGGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTGCCAGCCACTGCAAAAACATGCCAAAATGTAAAGACCATCAAGGCTAGGAAGAAACTGCATCAAGTAATGAGCAAAATAACCAGCTAACATCATAATTACAGGACCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGGCTAAATTCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCACCTCACATGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGAAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGCGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTGCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATCAGACAGATCAACGAGACAGAAAGTTAACAAGGATACCCAGAAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGATATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGGGCAATCAAACCAGAACTCAGGATTAAGAAACTCACTCAAAACCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAGTGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACAAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTATGTAGAGGGAAATTTATGGTACTAAATGCTCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAACTAGAAAAGCAAGAGCAAGCACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTCTTTTGAAAAGATCAACAAAATTGAAAGACCATTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACACAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAAGATCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTAAAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTTTGAGGCCAGCATCATCCTGATACCAAAGCTGGGCAGAGACACAACGAAAAAAGAGAATTTTAGACGAATATCCTTCATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTTTCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAAAATTCATGCTAAAAACTCTCAATAAATGAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTGTTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTTTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACCAACAGAGAGCCAAATTATGAGTGAACTCCCATTCACAATTGCTTCAGAGAATAAAATACCTGGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCATGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCCGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGTTACCAAAACAGAGATATAGATCAATGGAACAGAGCAGAGCCCTCAGAAATAATGCTGCCTATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTGGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTTATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCCATCAAAAAGTGGGCGAAGGATGTGAACAGACGCTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGGCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGTGTATATACCTAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGTCTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATCATTCTCAGCAAACTATCACAAGGACAAAAAACCAAACACCACATGTTCTGACTCATAGGTGGGAATTGAACAATGAGAACATATGGACACAGGAAGGGGAACATCACACTCCGGGGAATGTTGTGGGGTGGGAGGAGGTGGGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAAAATTTAAAGTATAATAATAATAAAATTAAAAAAATATATATATATAAACAGAAAAAAAAAAAAGAGGAGTTGGATGTTTGTTACAAAGAGCAAAGCCAGACGATTCTTGGAAGATGAAGCAGTCTAAGCAAGCAAGAAGATAAGAGAAAGGTTATATCATGTTCTGGTTGCTAAAAGGAGGGAGTGGTTAGAGATCAGCCACAAAGGAGGACAGTGCCCTGATAGGAAGTTTTGTTCTCTGTGTTAAGGTTTTTGGATTTTGTGCTAAGACTAAAGATAAACCATTCAAAACCAGTTTTAAGTATGATCTGTAAACTTTGATCTGAATCAGAATCATCTGGTAGAGATATTAAAAATACAGCTTTGGCTGGGTGTGATGGCTCCCACTGGTGATCACAGCATGTTGGGAGATCAAGGCAGGAGGATTGCTTGATGCCAGGAGTTCAAGACCAGCTTGGGTAACATGGTGGGACACCATCTCTACAAAGTAAAAATAAAAATAAAGTAAAAATTAGCCAGACTTTGGACTGCAGGAAGACTAAAGAAAAAGAAATTGTCCAGACTTAGTGGCATGTGCCTGTAGCTGTAGCCACTTGGGAGGCTTAGGCAGGAGGATTGCTTGAGCCTGGGAGTTTGAGGCTGCAGTGAGCTGTGATCATGCCATTGCACTATAGCCTATGCAACAGAGAGAGACCCTGTCTCTTAAAAAAAAAAAAAAAAAATAGAGGCCAGGCACAATGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAGGGTGGGTGGATCACCTGATGTTAGGCATTCCAGACCAGCCTGGCCAACATTGTGAAACCTCGTCTCTACTAAAAATACCAAAATTAGCCAGGCACGGTGGCAGATGTTTGTAATCCCAGCTACTCTGGAGGCTGAGGCTGAGGCCAGAGAATCACTTGAACCCAGGAGGTAGAGGGTGCAGTGAGCTGAGATTGTGCCATTGCACTGCAGCCTGGGCGACAAGAGTGAAACTTCGTCTTAAAAAAAAAAAAAAAGCTTTCTTCACTAAAAATTCTGATTCTGTACATCTGAGTTGCTTGAATATCAATATATTTAATCTTACCAAATGGTTTTGATTCACACCTAAATTTGACAAAGTTAACCTGTTCCCTTATGCACACCACCATCTTACATAAATTCATTATTGGCACCCTTTTCCTTTTTCAGATCCCTTCCCTGAAAGTATTATATTTTATACTTAGGCCATTTGTTTAATGGATTTTGTATGCATGTATGTTATAGGAAAATAAAATAGGTTTGCCTTCTTCATTTCTTTCAG
Seq C2 exon
ATTTGGAGTCAAAATATGGACCTGAGAAAATATCTCCAGAAAATGATATTTTTGAAATAAATTTACCCAAACATGTTATAAAGCAAATAAGTAAAACACTTGGCCTCGAGGCCTTTTATTTTAGAAATGACTCAGAATATAGAAGTAGATTTGAGGGACGACAGGGACATCAAGAAGGATATATCAACCAGAAGATCATCAGCTATGAAGAAATGCCTGCTTATACTCATGCTTCTCCTATTCATAATACACATAAACCATATGAATGTAAGGAATGTGGGAAATACTTTAGTTGTGGTTCAAATCTTATTCAGCATCAGAGTATTCATACTGGAGAGAAACCCTATAAATGCAAAGAATGTGGGAAAGCCTTTCAACTTCACATACAACTTACTCGACATCAGAAATTTCATACTGGTGAGAAAACTTTTGAATGTAAGGAATGTGGAAAAGCCTTTAATCTTCCCACCCAGCTTAATCGCCATAAGAACATTCACACAGTTAAGAAACTGTTTGAATGTAAGGAATGTGGGAAGTCTTTTAATCGTAGCTCAAACCTTACTCAGCATCAAAGTATTCATGCTGGTGTAAAACCATATCAATGTAAGGAGTGTGGGAAAGCCTTTAATCGTGGTTCAAATCTTATTCAGCATCAAAAAATTCATTCCAATGAGAAACCCTTTGTATGTAGGGAATGTGAGATGGCCTTTCGATATCATTACCAACTCATTGAACATTGCCGAATTCATACTGGCGAGAAACCCTTTGAATGTAAAGAATGCAGAAAGGCCTTTACTCTTCTGACAAAGCTTGTTCGACATCAGAAGATTCATATGGGTGAGAAGCCCTTTGAATGCAGGGAATGCGGGAAGGCCTTTAGTCTCCTCAATCAGCTTAATCGCCATAAGAATATTCACACAGGTGAAAAACCATTTGAATGTAAAGAATGTGGGAAGTCCTTTAATCGTAGTTCAAACCTTATTCAACACCAGAGTATTCATGCTGATGTAAAACCATATGAATGTAAGGAGTGTGGGAAAGGCTTTAATCGTGGTGCAAATCTTATTCAGCATCAAAAAATTCATTCCAATGAGAAACCCTTTGTATGTAGGGAATGTGAGATGGCCTTTCGATATCATTACCAACTTATTCAACATTGCCAAATTCATACTGGTGGGAAACCCTTTGAATGTAAAGAATGTGGAAAGGCCTTTAGTCTTCTGACACAGCTTGCTCGACATAAGAACATTCATACTGGTGAGAAACCATTTGAATGTAAAGACTGTGGGAAGGCCTTCAATCGTGGCTCGAACCTTGTTCAACATCAGAGTATTCACACTGGTGAGAAGCCCTATGAATGTAAGGAGTGTGGGAAGGCTTTTAGACTTCACCTACAACTTTCTCAACATGAGAAAACTCATACAGGTGAGAAACCCTTTGAATGTAAGGAATGTGGGAAATTCTTTCGTCGTGGTTCAAATCTTAATCAACATCGAAGTATTCATACCGGAAAGAAACCCTTTGAATGTAAGGAATGTGGGAAAGCCTTTCGACTTCATATGCACCTTATTCGACATCAGAAATTTCATACTGGTGAGAAGCCCTTTGAATGTAAGGAATGTGGCAAGGCCTTCAGTCTTCACACCCAGCTTAATCACCATAAGAACATTCACACAGGTGAGAAGCCATTTAAATGTAAAGAATGTGGGAAGTCCTTTAATCGTGTCTCAAACCTTGTTCAACATCAGAGTATTCATGCTGGTGTAAAACCATATGAATGTAAGGAGTGTGGGAAAGGCTTTAGTCGTGTTTCAAACCTTATTCAGCATCAGAAAACTCATTCCAGTGCGAAACCCTTTGTATGTAAGGAGTGTAGGAAGACCTTTAGATATCATTACCAGCTTACTGAACATTACCGAATTCATACTGGTGAGAAACCCTTTGAATGTAAAGAATGCGGAAAGGCCTTTGGTCTTCTGACACAGCTTGCTCAACATCAGATCATTCATACTGGTGAGAAGCCATTTAAATGTAAGGAGTGTGGGAAGGCCTTTAATCGTGGCTCAAACCTTGTTCAACCTCAGAGTATTCATACTGGTGAGAAACCCTATGAATGTAAGGAGTGTGGGAAGGCTTTTAGACTTCACCTACAACTTTCTCTGCATCAAAAACTTGTACAGGTGAGAAACCCTTTGAATGTAAGAAATGTGGGACAGCCTTCAGACATCAGTAGCAACTTACTGAACATCAGAAAATTCATACTTGGGTGAAAACCTTTGAATGTAAGGAATGTGGGAAGGCCTTTCAATATCATTACCAATTTCATGGACATTATAGATTTCATATTCGTGAGAACCCTTATGAATGTCAAGGATGTGGGAAATGCTTTACCAGTGGTAGAAACCTTAGAGTACATCAGAGAATTCATACTGGTGAGAAACCATATCAATGTGAAGAATGTGGGAAAGCCTTTAGTCATAGTTCAAACCTGTTAAACATGTTAAAATTCATACTGATGAGAAACCCTATGAATGTAAGGAATGTGAAAAGGCCTTTAGCAGTAATTATGATCTTACTGTACATCTGAGAATCCGTACTGCTGAGAAACCCTGTGAGTGTAAAGAATGTGGAAAACTTTTGGATTTAGCTTAGTCTTTACTGCACATCAAAGAATTCATACTGGTATGAACCGTATGAATGTAAAGAATGTGGAAAGACCTTTACTTGTAGCTCGAGCCTTGTTCAACATGTTAAAATTCATACTGGTGAGCAACCCTGTGAATGTAAAGGATGTGGGAAGACCTTTAGACTTAGTTCAGTCCTTTCTGCACATCACAGAATTCATACTGGCATGAAACCCTATGAATGTAAAGAATGTGAGCAAACCCTTACTGTGAATGATCTGCTTACGCAACATCAGAAAATTCATTATAGTTAGAAGTTTTATGAATATAAGGAGTGTAGACAAGCCTTCACTGTGTATGAAAAATTTACTCAACACCAGAGAATTCATATTGATGAGAAATCCTGTGAACATAAAAGAATGTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000128000:ENST00000221355:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.020
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.6),PF0009621=zf-C2H2=WD(100=3.4),PF0009621=zf-C2H2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.8),PF0009621=zf-C2H2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.8),PF0009621=zf-C2H2=WD(100=3.4),PF054957=zf-CHY=WD(100=12.2),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=2.9)
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains