HsaINT0188398 @ hg19
Intron Retention
Gene
ENSG00000197362 | ZNF786
Description
zinc finger protein 786 [Source:HGNC Symbol;Acc:21806]
Coordinates
chr7:148771478-148777809:-
Coord C1 exon
chr7:148777683-148777809
Coord A exon
chr7:148771631-148777682
Coord C2 exon
chr7:148771478-148771630
Length
6052 bp
Sequences
Splice sites
5' ss Seq
TAGGTAAGA
5' ss Score
9.14
3' ss Seq
TGTCTGACTTCTCTGTGCAGATG
3' ss Score
10.66
Exon sequences
Seq C1 exon
CTACCTCTGACTTTTGAGGATGTTGCTATTTATTTCTCCGAGCAAGAATGGCAGGATCTAGAGGCATGGCAGAAGGAACTTTACAAGCATGTGATGAGAAGCAATTATGAGACTCTCGTCTCTCTAG
Seq A exon
GTAAGACCTGTTCACCTTTGTGGGTAGGTCATGGAACTGGATCCTGTAAGGGGTCACAGTCACTTGATGCTCCTGTTTCTCAGGTAGCAAGATTTCTCAGAAATTAACTCAGAAGGGTATTTTTACCCTGCAATCTATTGTTAATACTTTTGTCAACATTGTTAATCTTTACTCAAGGGTAGACATTGTTACATGAGAATATTTGAACAATGTAAGGTGGTCCGGGTGACTAAATATTATTTATGAGGGGCCTTTAGTCATGACTATCAGGATGCCATGATTGTCCACATAGGAGCACACCTAGCGCACATTCATGAAGTGCTCTGTATATCTTTAACCTAGGATGTCCCCACCTCACAGCTTTTACAGTGGGGTCTAAATACTTCAGAAAAGCTATTTTGGAAGGGTGTACAATGAAGTGTTTGTTTTTTTGAGACATAGTCTCACTCTGTCGCCCAGGCTGGAGTCTTGGCTGACTGTAACCTCTGCCTTCCGGGTTCAAGCAGTTCTCCTGCCTCAGCCTACCGAGTAACTGGGACTACAGGTGCGTGCTGCCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGACAGGATGGTCTTAATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACTACGCCTGGCCTGAAGTGTTTTAAGAGTAGCTGTCTGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGGACTTTGGGAGGCCGAGGCAGGTGGATCACGAGGTCAAGAGATCAAGAACATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGACTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGGGGTTGCAGTGAGCTGAGATCACGCCACTGCACTCCAGCCTGGCAACAGAGTGAGACTCCGTTCCAAAAAGGAAAAAAAAAAAAAAAAAAAGAGTAGCTGTCTCTGCCTGGGTATGGTATTGGATGTCCTTTTTGCTTATTTGGTTTTTATATTTCATTTATCAAATATCATTTTTAAAAAATCAGTCTGTTCAGAGAAGCATCAAGTGAAAGATCGAAGTCTCCTGTTTCATTCTTTTTTTTTTTGAGACGGAGTCTGGCTCCGTCGCCCAGGCTGGAGTGCAGCGGCGGGATCTCAGCTCACTGCAAGCTCCGCCTTACGGGTTCACGTCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACTGCACCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATTTCCTGACCTCGTGATCCGCCCTCCTCAGCCTCCCGAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCAGCCCGTTTCATTCTTATCTCCACATTCAGTTAACCACGTGAGGGCAACCACTTTTAACCATTTTTGTTTTAGTTTTTAAAGTGGCTTCCTCCAATCTAAATACGCTTCCAATAACTTGATTTATCGAGTTTAGACAGAATTAATTACTATGAAAAATTAGGCATTAGTTCACTTATACAATCCCTCTTCTATCATCTTCTCCCCAGTTTTTGATAGTTTTTGTGCCTCTGTTGGTCAGCTTTATAATTTAAAATAATATGTTTAAGATTCTAGATTGTATTCCATCATTTTCATCTGACTCATTCAGTATATAAAGATAATTAGTTCTCTAGTATTTCTCTTCATCTCTTCTGCCAGTTGACAACAGCCATACCACTTCCTTTATATTGCAAAGTTTCTAATATTTATATTCTGTTCTGTTACCATAGTTAACTTTTTTTTTTTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACCATGTCGGCTCACCGCAGCCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCATGCGCCACCACGCCCTGCTAATTTTATATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCAGGTGATTCACCCACCTTGGTCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCTACCATAGTTAACTTTTGCAGGCTGTATGTATGGATTGTTTCTAAAACATATAACTGAAAACATTACATTATTTTCATTGTTACTGAAGAATCAGTTACAGTAAATGAATCTATAGAGGCAAAAATATAATTCTATGCCATTAACCCTGTGCCAGCCTAATAAGAATGTTCCAAGCATCAAGATCAAATGGATTCTCTTTTTTTCATTCTTATCAGTTGTTCAAAATTATGCTACATTTTGGCCAGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTTGGAGGCTGAGGTGGGTGGATCACTTGAGGTCAGAAGTTTGACACCAGCCTGGCCGACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTTGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATCACTTGAACCCAGGAGGCGGAGGCTACAGTGAGCCGAGATCACGCCATTGCACTCCAACCTGGGCAACAGTGAGACTTCATCTCAAAAAAAAAAAAAAAGACAAAATTATGCTACATTTTAATTTGTTTCGCTGTTGGGCCACAACTGTTTCTCATGCTTTCATCATATCCTTGTGATTATCCATCATCGTCATCATGTTGCCCAGGCTGGTCTCGAATTCTTGAGGTCAAGTGATCCACCTGCCTTGGCCTCCCCAAGTTCTGGGATTACAGTCGTGAGCCACTGTGGCCGGCTAGGAGAACACCCATCTTCTTTTATTTATTTATTTATTTATTTTTGAGAAGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCTGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTGTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTTGCCAGGATGGTCTCGATCTGCTGACCTCATGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCACGCCTGGCCACCCATCTTCTTAATCTAATAGTCAGTTACATGGATCTTTCTGCCTTCTGTCAATTCTCTCCCCAAATGAATCTATAGATTCAAAGCAAGTCCAGTCAGAATCCCAATAGAGCTTTCTGCGGAATTTGATAAGCTGATCCTAAAGAACATGGGAGAACCAAGACAAGAATAATGAAGACAGTCTTATGGAACAAGATGGAACGTGACTGATTGTCTTATCAGATAGCAAGACTTATTATGTGGTACTATGTTAGAGATAGTAAAACATCTGATAGCATCGTGTGTTGTCAAGATGTGAAGCAAAGTGAACATTCCTACTCTATTGTCAATCAGCATAGCCACTTTGGAGAGCAATTTGGTAACATACAGTAAAGTTGAAGACATGCTTATCCTGTGATACAGCAATTCACTTCAAGAACTGTCAATGCTTATGTGTGTATTCATAGAGGCATGCCAGGGAGCAGAAGAAAAAGACAGACTGTGATATATTCATATAATCAAGACTATCAAACAAATGAAGCCAAGTGTTCCAAAATGGAGAAATTTTCAAAATATAATTTGAGGAGAGAAGAGCAAGTTGCAGTACAATGTGGTATGGTCTATGTAGTTTTTTTTTTTTTTTTTTTCAAGATGGAGTCTCTCTCTCTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACCACAACCTCCACCTCCCAGGTTCAAGCAAGTCTCCTGCCTTAGCCTCCCGAGTAGCTGGGACTATAGGCACACACCACCACACCCAGCTAACTTTTGTATTAGATGAGCTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCGTCATCCTCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTGGTCTGTGTAAAGTTTAAAACCAGCAATATAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGCCGGATCACCTGAGGTCGGGAGATCGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGTATGGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGACTGAGGCAGGAGAATCGCTTAAACCTGGGAGGCGGAGGCTGCGGTGAGCTGAGATCGCGCCATTGTACTCCAGCCTGGGCAACAAGAGTGAAACTTTGTCAAAAAAAACAAAACAAAAACCCAGCAACATTTTATTTATACATATATATTTTAAAATAAGAACATGCATAGGAATAATGTACACCAGATTCAGGGTAGTGCTTATGTCTGGAGAGGGATATACAGGGGCTTAAACTGTGTAATGTCTCATATCTTCAAAAAACCTGAAGTAGACTGGGCATGGTGGCTCATCCCTATAATCCCAGCACTTTCGGAGGCTGAGGTAGGAGGATATCTTGGGCTGAGAAGTTTGAGACCAGCCTGGACAAACTAGGGAGACCCTCTCTCTACAAAAAATTTAAAAATTAGCTGAGCATGGTGGCTCCCGCCTGTAGTCCCAGCTGTCAGGAGGCTGAGGTGGGAGGATTACTTGAGCCCAGGAGGTTGAGGCTGCAATGAGCTATGATTGCACCACTGCACTTCAGCCTGGGAGACACAGTGAGACTCTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGAAGTGTGTCAGCACAGTAGGATTTGACAAAGTTAGATGGCATCCAGGTTTTTGTATATTTTTCTCCTTCTCCATGTGCCAGAAATATTTCTAATAAGTTAAACCACTGGCCAGGTGCGGTGGCTCATGCCTGTAATCGCAGCACTTTGAGACTCCAGGGTGGGGTAAGACTACTTGAGTCCAGGAGTTTGAGGTTAGCCTGGGCAACATAGTGAGACCCCATTTCAGAAACTAATAAAAAAAATTAGCCAGTGTGGTAGCTCTTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGCAGATCACTGGAGCCCAGGAGGTTGAGGCTGCAGTAAGCTGTGATCATGCCACTGCATTCCAGCCTGAGAGACAGAGTGAGACCCTATCTAAAACAATAGTAATAATAACTTAAAGCATTATTTTAAAAACTCCTTTTTGACCGCATTTTTGCCATAACCAACTTGCTTTAAAATTGGACCCTATGATCTGGCTGTTAATAAATCACTATTAAGAATATTGAAGGCTGGGCGCAGTGGTTTATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCAGACTGCTTGAGCACAGGAATTTGAAACCAGCCTGGGCAACACGGTGAAACCCGTCTCCACTAAAAATGCGAAAATTAGCTTGGCCTGGTGGTGCGTGCCTGTAGTCCCAGGCTGAGGTTGAAGAATTACCTGAGCCCAGGAAGCCGAGGCTACAGTGAGCCATGATTGCACCACTGCACTCCAGCCTTGGCAACTGGAGTGAGAACCCATCTCAAAAAATAAATAATTAATTTTAAAAATATATATATATATATAGCATTAGCCATTTTGTTTTTGGACAAAATACAGCATTGCTAAATGTGTGGGGAACATGACAAAATTAAAACAACATACCTGATCTAACATGCCCAGACAGACTAGGAGGCATTGTTAGGATGTGTAGGCGGTTTTTTCATCTTTGTGTAAACCTGTTTTTTTTTTTTTGACATGTTGTTCTCATACTTTGTCCCAGGAGTGAATGTTGAGAAATTTAGAAACTTAGTGTGCTTTAAATTCAGGAAGCCAAACTACCCTGTCTGACTTCTCTGTGCAG
Seq C2 exon
ATGATGGACTTCCAAAACCAGAACTAATATCCTGGATTGAACACGGGGGAGAGCCCTTCAGGAAATGGAGAGAATCACAGAAATCAGGAAACATAATTTGCTCCTCTGTTGATATGCATTTTGATCCAGGTTTTGAGGAACAGCTGTTTTGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000197362-ZNF786:NM_152411:2
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.034
Domain overlap (PFAM):
C1:
PF0135222=KRAB=WD(100=95.3)
A:
NA
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)