HsaINT0188401 @ hg19
Intron Retention
Gene
ENSG00000142409 | ZNF787
Description
zinc finger protein 787 [Source:HGNC Symbol;Acc:26998]
Coordinates
chr19:56598732-56614596:-
Coord C1 exon
chr19:56614508-56614596
Coord A exon
chr19:56600462-56614507
Coord C2 exon
chr19:56598732-56600461
Length
14046 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGC
5' ss Score
9.6
3' ss Seq
CCTACCCTCTTGCTTTCCAGTGG
3' ss Score
9.4
Exon sequences
Seq C1 exon
GGACCCAGACATGGAGCTGCGGGAAGAAGCCTGGTCTCCGGGGCCGCTGGATTCTGAGGACCAGCAGATGGCCAGTCACGAGAACCCAG
Seq A exon
GTGAGCAGCCAGAGGCCTTCCCAGCCGACCCCGCTGCCTCCCACCTGACCCTGGCTTCCTTTGCCTCTGGGTGGGAGGAAACCCCCCTTCCCTGTTTTCCCCTCTTGGGGCCCTGGGACCACCCGACCCTGGCCTCCCCTCCCGCCCTGGGCCTTGCACTCCTGGCTGTAGAGGGAGGGCTAGTGTTGTGGCTCCAAGTTTCCTTTCTGCTGGATGATCTTGGGGACCCCTGGGGGCCACCTTCTCTGCCTGACTTCCTCTGTCCTTGCCCCTCCAGCCTGGGCAGCACCCCCGTCTGTTGAGGGTGCCCCCTTCCTCTCCCCACAGCCCCGCCTCCACATCCTGGACCCTCTGCTATGATTCCAGGCGGGCCTGTGGCCCTCCCTGGCAGGAAACTCCTTACACCAGGGGTGGCCCAGGAGCGCAGGGAACCCGCAGGCTGATGCCGACTTTTCAGGGAAAGCTCAGGAGTGCAGGGAACCCGCAGGCTGACGCAGACTTTTCAGGGAAAGTTGTCAGTTTGGGTTTTTATGTGAAATCCTTCACTTTTTGGACATTGGCAATGTGTTTTGTTTGTTTAATAAAGCATTATTGGGGTTGAGCAAAACTCATTTGTGGGCTACGTGGGGCCCAGGTTTGCTTGCGAAGGCCCCATGGTGACCTCACTGTGGCCCCTGACACCTCATGGCCTCCCTCCCCTCCACGGAGGCCGCCTCCCTGCCTCAGACCTGAGGAATAAGGTGCGGCAGCTTCTCTCCTTGCTGTGTCTGCATGTCAGGCCCCAGGTCCCAGGCCCACGCTGGCCCCACGCTGGCCGGGGCTCAGCAGACCTTTTCTGCAGAGAGCCAGAGAGGAAATACTGTTCATCTTGCAGGCTGCGGGCCTCACAGATACCACGCAGCCACAGTCCACACGGAAATGCGTGGGCACACTTGATGCAGAAAGGCCGGCAGAGCTTGCCAGCTCAGGCTGGCATAGCTGAGTCGTCCCATACAAAGACCGGGGTGAAGTTTGGGATCGATTTTGTAAAGCACCTCAGCCCCTTTTTGAGTGATTTCTGAGATCTGTGGATGGAGCATGAACAGAAGCTCCCTGTGGGCGGGGCTGTGGCAGCCTTGGTCCCGGGGTAGAAACTATGATGGGGGTTTTGAGTGCGTTGCCAGGACCGCATGCCCAGGGGGCCCACACCCCGGCCCCAGGCTGCCCCGCGTCTCAGTGGGTGGTTGCCATCCCGCACCGCCACAGCCCTCGAGGGCTGCCCCTGCCTTCTCCCTCGCATACATCCTTGGCCTTCGAACCTTTTCGAAAATTAATTCTGTGGAAATCTCAAGTGTGTGGACGCAGTGTGATGAATCCCTCTTCCTGCGCCAGCGATTCGCGGCACTGCTGGTCCCTTTCTGCCCACTGTGGTTCTCTTTCCACAGCGTTTTAGAGAAAATATCCATCACATCATTTTGTCTGTAAATTCTCCAACATGTAAGGACTCCTTGAAAAAAAGAAAAAGCCCTACAGGAAGCTGATCTCATCTAACAAAATGTCATTTTTCAGGAACTTCATCTAATCTAGCACCCGGTCCTTTTTAAAATACTTCGTTGTCTCCAAAATGCTTGTCTTTGAGTAAGTTCATCTTTAATTTTACAAGTCACTCATACACTCACTCTCTTTGTAGAAGGTAGGTGTCAGGTCCCCTTGTCCAGCCCGCTGCCCTGCCCAGCCCTGGCCCTGCGTCTGTGGGAGTCCTGTCCCCCACCAGGCAGCTGGCTCCGGGGAGGGCCTGCGCTTGGCGCCGCCTCTGGAGCATCACCCCTGCGTGACGCCCTTGCTCGGCTGTCAAAGATGGGCTGCGCACGCTCCCAAGCTGCTCTGGTGTCCGGCGTTCGCGTAACTCCCGTGTGGGGTCCCGCCTACATGCGTCCCCCCTATGTGACAGTGACAGACATCGTAGGTGGGGGTGGAGTGGCGGGGGTTGGCCTGGCCATGGCGTGTGGAGTCCCGCCTACATGCGTCCCTCCTATGTGACAGTGACAGACATCGTAGGCGGGGGTTGGCCTGGCCATAGCATGTGGGGTCCCACTTACGTGCGTCCCTCCTATGTGACAGTGACAGACTTCGTAGGTGGGGGTGGAGTGGCGGGGGTTGGCCTGGCCATGGCGTGTGGAGTCCCGCCTACGTGCGTCCCTCCTATGTGACAGTGACAGACATCGTTCGTGGGGGTGGAGTGGTGGGGGTTGGCCTGGCCATGGCGTATGGAGTCCCGCCTACATGCGTCCCTCCTATGTGACAGTGACAGACATCGTAGGTGGGGGTGGAGTGGCGGGGGTTGGCCTGGCCATAGCATGTGGGGTCCCGCTTACGTGCATTCCTCCTGTGTGACAGTGACAGACATCGTAGGTGGGGGTGGAGTGGCGGGGGTTAGCCTGGCCATAGCATGTGGGGTCCCGCTTATGTGCGTCCCTCCTATGTGACAGTGACAGACATCGTAGGTGGGGGTGGGGTGGCGGGTGTTGGCCTGGCCATGGCGTGTGTGGTCCCTTTTCCTCTAGCCTATTGCTGAGGGATATGGGGGCCCATGGGGCAGGCATCTGGAGAGGAGCATACCCTGGAGGGGCAGGGGAGCATGCCCGCCAGGCAGAGAAAAGGGAACCAGCAGGGCTCGCAGCCCACCTGGCCCCAGCCTCTTCTGCGGAATTAGCGTCCAGGCCCTCAGCCTACCTTGTGGGGTCCTCAGACAGGGAGGAGGCAACTTTCACCATCCTGCATGTGAGCAGTGGCCTAGGGAAGGTTGAGAAGGAGGCAGAGAGAACCAGCAGCAGGAGGTGTCAGCCTGAGCACTTGCCAACCCCAGCCCTGCAGTGCTGGGTCATGGGGCAGGGTGTCTATGTCCTGTGTTGGAGGCAGGAGATGCTGGTTGGAGTGCCAAAGAGGGAGGGTGCCACCCGAGCCAGGCTGCAGGCACTCAGCACAGAGAGGCCTTGGGGTAGATGCCGTGGACCAGCGGGCCCTCACCCCGGACCCTTCCTCAGCTCCTGACTTCCGTGTGTCCCGGCACCTGCTCTGGGAATACATCCCGAGTATGGTCGCTTCTTCCCACCACGGCCCCAGCCCTGTGGCCTTACACACAGTCACGGCGCACTGGCCTTCCTGCGACCTCTGTCCCTATCCTTGTCCCCTCCTGAGCCTCTTGGGGAGGAGGCGAGATCCCGGCGCCGTGCTCAGAACCCTGTGAAGGTGTCCTGGCTTGACGGGAGCGAGAATCCGCCGCCTGTCCAGCCTCCCAGCCCTACACACTGTCTCCCCGTCTGCCTCCCAGCTGGTCTTGGACCCCTGACACGGCCCCCAGCCTGCGTGGCCCTGCTGCAGTTTTCTTCCCCAGAGGGTGTTGTGTGACTCGTCCTTTCTCTCTCTCTCTTTTCTTTTTTTTTTTTTTTGAGACGGAGCCTCACTCTGTCTCCCAGGCTGGAGTGCAGTGGTACGATCTCGGCTCACTGCAACTTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAATAGCTGGGATTACAGGCACCCGCCACCATGCCTGGCTGATTTTTGTATTTTTGGTAGAGACTGGGTTTCACCGTGTTGGCCAGGATGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCCAGTGTTGGGATTACAGGCATGAGCCACCGCACCTGGTGTGACTCCCCCTTTCTGTCCCCTTCCGCCAGCTCTCTGCTCCATGAAATGCTGTCTCAGCAGAAATGTCCCCATGTCCCCTCCCCTGCGTGCCTGTCCTTCAGCTTCCTGGAGATCACTCCCTGGGGCACCAGGTCGCTCAGGGTGCAGACTGTTCAACCAGAGGGTCCCGTCTTGGGGGCCAGGCAAGGCTTCGTTCACGGAGGAAGGGGCTTTGGGCTGCCCTGCAGGGGATGTGGCAGTGTGGCTCGAGGGCCCTGGGAAGCCACTGGGCAGTGGGGACGCTCTCAGCTGCTGATTACAGGGAACCCGGACAGCAGTGGCCTAGCCCAGAAGGACTTGATATGTTCTCGGGCAGCTGGCCTGCAGGCGGGACAGATCCAGGGTGGCCTCTCTCCTGAGAGCCGCTTGTCTCTGGGCCCCTTGCTGTGACGTCCTGGCCACACCGAGGCAGTGCCTCAGCCCCAGGTGGTGGGTCCCCAGGAAGCTCCGGCAGTGTCCTGCTGTGCCACTTCTCTCTGGTGCCGCCTTATCACCTAGGCTCCATCACCCTGCGGCCGTATCACCCGGGTGGCCATATCACCCTGCGGCCGTATCACCCTGCGGCCGTAATCACCCGGGCAGCATCACCCTGCGGCCGTAATCACCCGGTGGCCATATCACCTAGGCTCCATCACCCAGCGGCCGTATCACCCTGGCGGCATCACCCTGCGGCCGTAATCACCTGGTGGCCGTATCACCTAGGCTCCATCACCCGGCGGCCATATCACCCTGGTGGCATCACCCTGCGGCTGTATCACCCTGCGGCCGTAATCACCCGGGCGGCATCACCCTGCGGCCGTAATCACCTGGTGGCCGTATCACCTAGGCTCCATCACCCGGCGGCCATATCACCCTGGTGGCATCACCCTGCGGCTGTATCACCCTGCGGCCGTAATCACCCGGGCGGCATCACCTTGCGGCCGTAATCACCCTGCGGCCGTATCACCCTGCGGCCGTATTACCTGGGTGGCATCACCCTGCAGCATGGGGTTGCCTGTCTTTGGGCCTCTCCTTCTGAGGAGTGTGAGAGGAGAATGGGTTCTGAAGCTCCCAGGCAGGCCTCACTGGCCAGGGCAGGTGGGTCCCCACGATCCAGAGGAATCCCAGGCAGCCCACACTTGGGACCTTCTTGTGAAGAGGAAAGGAGTTGGACTGTGGGTAGCTCCCGGCCATGTCCCCTGTTCAGAGGTGTCCCCAGGGAGGCTTGGGTGGTTGGAAAGCTTTCTGTGGCTGTTGTGGGGAGAGCAGCGTGCCAGGAACCCCTGGCACATGTTCCTTCCATGGAGCTGTATGGGCCCCAGGCTCCTTCACCCAGGCCCATGGCTTTGCCTCAGTGTCCCTGGAGACCTGGGTCGGGGGTGGGGCCTCGGGTGCTGACCGGGGGTGCCCTTGCTGGGCTTAGCAGGCCGGGCTTCAGCATGAGGTTGTCTGAACAAAAGTCTCCATGCCTCTTCTCCCCCAAGCCTCCCGAAATTCCAAAGGTTTGAACCTCCCCACCCCATCTCTTACTGGAGGTCACTCCAGTAGGGTTGCCCCTGCTGATGACCAGAAGGCCCCTGAGAGACGTGGCACAGCAGGGTGCTGTGTGTCCCCTGGGCCAGGTGGCTTTGTCCCTGGGGTCTCGGCTTCCTTCATTTTAGTAAACTGGCTCTGCAGCGCCTTTGCCGTCAGGGCCGGGGGTAGTTGATCCCTCGCGCCGTGCCTGCACGCAGGAACACAGCCAGATAAAAAGAAACGTACGGATTTTATAGGAGACCAAAATAAAAGTTCCACAGAACAGTTCTTCCTGTGCTAGCAGCACGTGCGGGTGTTTCCTCCTCCTGCCTCCATTCCGTTTCATTTACATGCTGGCCGCCGTCCACGCAGTCCATCCTACTGCCTGCCGGGCTGAGGCCCGCAGTGGAGACGCGAGGCGTGGCCTGTGGTGGGCGTGAAGTTCACAGCACGGCGTTTCCCACGTGTAGCACGGTGAAGAACTGCATGTGAGATTGGAAAAGCCACAAAGCCAGTGTTCTTTCTGGTTAGATAGATTGACCTGGGGCGTTTTTGAAACCTTAGAAATTTTGTGATTTTTTTCTGTATTTGAGTATTTCTGGGAGGTGTGTTCAGATCCTCTGAGCTAATACTGGTAGGAATAATGGCCGGCACTTCATAATCACGTCCTGTGTGCCTGCAGTCAGTGCAGCCCCCTTAGGTGGTTACCTTGTTGGATTTGCACAAAACCCCATGAGGTCTGGGTGCTGGGAAAAAAGGGCCGAGACACCTGCCTGGGCCGTGGAGCTGGGGGCTGGTGGGTGGCATGCAGCCTCCTGCAGGCTGAGGCCGGGGCTCCTGAAGATCTCAGGAGGGTGAGACCCATGGCTCTAGGCTGACTGGCGCTTCCTAACCTGCCTCCTGGGGCCTTTTCTCCTGATGACCCCAGATGGAGTTCCCGATGTTGAGAGGGTGAGGGGTGTGGGACCGGGCAGCGACAGCTCAGGCAGCCTCAGAGCTGTTCAGATAACGAAATAAAGACATTCCGCTTCTGAGGAGGGAGCGGTGCCAACAGGAAAGCTTCAGCCGGTGTCTTACAGCTGGAGTTCTGGCTGCCCTCGGGTGAGCACGGGCTCCATGTTTCAGTGCACCCTCATCTCTCTTTATTTTATTTTGTTTTATTTTTATTTATTTATTTATTTTCTGAGACGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAACGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCATGCCCGGCTAATTTTTGTAGTTTTAGTAGAAACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAATTGCTGCCCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGTTGTGATTACAGGCATGAGCGGCCCAGCCTATCTCTTTTTATTTTTTGGAGACAGGGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCCATCTCTGCTCACTGCAGCCTTGACCCCCTGGGCTCAAGCTGTCCTTCCACCTCAGCCTCCTGAGTAGCTGGGACTCCAGGCACACGCCACCACACCCAGCTAGTTTTTTTATTTTTTTTATTTTTTTATTTTTTTTATTTTTTTAGAGACGGGGTCTCACTATGTTTCCCAGGCTGGTCTCAATTTCCTGAGCTCAAGTTAACCTCCTGCTTTGGCCTCCTAAGTAGTTGGGACTACGAGTGTGAGCCACCGTGCCCGGCCAGATGACAGTTCTGAGTGTTGGGTGATGGCAGAGCAGCCACAGCGTGGCCCTTGAATCTCCTGTATCCCTGCATAAAAACACGGCAACCAGGTAGCAAAACTCAAGTTCCCTGGATCACAGTTGCAAAGTTACTAGGTCCTAAGTTATCCCCATGAGTTGCAAAATACAGCTGGATGAGGATAAACCACCGAGGCCTGTGTGGTGTTAGCATCTGACTGGGAGGAGGGAAGCAGAGGAGAGCCACAGACAGCCTGCAGGTCTTCACTGCAAAGCTGGGCAGGGGAGTCGGGGTCACTTTAGGACCAGCAGCTGAAGTAGGAGCTGTTTTGTCCAAACCAGGGTAGTGGGGAGAGAGGCTGGTGGGAAGGCCCAAAAGGGGCTGGGGCAGCTCAGGCCCTGCAGCTCTCTAAGCAACCAGGTAAAGTGCTGTGCAGGGCAGAACCTCATGTGAGGAATCAGAATCGAGCAGGGCCCCTGTCCTTGGCAACAGAGGAAGGCAGGAGAAGGTCCTGATGACAGTGGGGACAGCGGCTGGAGTGTGTGCATCTGTGCAGGCTGGTTGCAGCGTTTTTACCTGCTGTGTGAGAACCTCTGAGAAGTTAGAACAGCTACCCTGAACCAAGCCGCCTCCTAGAAATTCAAGGAAACTTATACATAAAATGAGCAACAGAAAAATACTGAGTTCAACCTTCCCAAAAGTGATTATAATAAAAAAGATAAGGGACAGGATGGCATTTCTACAGATAGGCAGGCCGGAAGTGCATCCCAACAAGATCAAGATCATTTAGTACAGGGTCCCCAGTCCTTGGTACTGGTGCTGCTCCGTGGCCTGTTAGGAACTGGGCCACACTTGGGGAGGTGAGTGGCGCATGAGCGAGCATTACCACCTGAGCTCCGCCTTCTGCCAGGTCAGCGGCGGCATGAGATTTTCACAGGAGCGGGAACTGCACATATGAGGGGTCTAGGTTGTGTGTTCCTTATGAGAATCTTATTTTTTGAGATGGAGTCTCGCTCTATCACTGAGGCTGGAGTGCGATGGTGCGATATTGGCTCACTGCAACCTCCACCTCTCGGGTTCAAGTGATTCTCCTGCCTCAACCTCCCGAGTAGTTGGGATTACGGGCACACACCACCACACTCAGCTAATTTTTGTATTTTTTTAAGTTAAGATGGGGTTTCACCACATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTCATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGAGCCTGGTCCCTTATGAGAATCTAATGCCTGGTGATCTGAAGTGGAACAGTTTCATCCCTGAACCATCCCCTGCTACCTCCCCACCCTGTCCGTGGAAAAATTGTCTTCCACAAAACCAGTCCCTAGTGCCAAAAAGGTTGGGGGCCGCTGATTGTGAACGAGCTGAGGCAGTGCAGCGTGTGAAAGAACAGCATAATCACAAACTCAGAAACGAGGGGGCAGCCTCGGCAAAGATTTGCAAATAAGAACAAAAACCTTTCAGAATGAAGACTAATGTAGAAGGAACTCAAGAATAAAAACATCGTTCTTTAAAAAAATTGAAGGCAAGAAGGAGGATCATTTTAAAATGAGAAAAAAAAAAAAGGCGGGGCGTGGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAGGCCAAGGCTGGTGGATCACTTGAGGCCAGGAGTTTGAGACCAGCCTGGCCAACATGGAGAAACCCTGTCTCTACTAAGAGCACACACACACAAAATTAGCCAGGTATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGGGCAGAGGTTCAAGACCAGCCTGGCCAACATGAAACCTTGCCTCTACTGAAAATGAAAAAAAAAAAAAAAAAAAAGCCGGGCATGATGGCTCATGCCTGTAATCCCTGCTACTCGGGAGGCTGAGGCATGAGAATCACTTGAACCTGAGAGGCGAAGGTTGCAGTGAGCCGAGATCATGTCACTGCACTCCAGCCTGGGTGACAAAGTGAGACTGCGTCTCAAAATAAATAAATAAAATGAAAAAAGATTAAAACAGTTTTAAAGGAAACAAGTTAGGAAAAGAAAATCCAACATATGGATAGGCAGAGTCCCTGAAGAAGAGACCCAAAGCAAAAGAATAGAGCGGATAGTAAAAACTCATTCAAGGAACACCCCTTAACACATGAAAGCTGCGCATTGAAAGAGCAAATCACAGATGGTTGCGTTAGAATTGCTGGACGCTAAAGGAAGTCACCGATCCTTCGTGGCAGAAAGCGTGGAAGACTTGGAAAGTCAACATGACTATGCTCGGACTTAGCACTTTATGCCAGGAGAAAATGGCATTATGACTCACGGAAAAGGGACCTTCAGATGGGAAGGGTACAGACAGGCTACCCAGCAACAGCCCTGTGAACCCCGTTCCTCTGTGCCCTTCCTGAGGAACCTAAAAGCGAATGAGCCTCAGACAACTGACCAGGGAAAGGGATGGGAGGAGGGTGTGAGCAGGTCAGTCTCCTGAGCCCGAACATGTCTCAGTCGGCCAAGACCTGCACCTGACGGAGGGGATGCAGCCGAGAAAACACTGAGGGGAAGGAGGACGGTGCGTGCAGCACAGTCCAGGAGTTGTGCCTGGCAGTGGTAGCAGTAGCATTGTTACCCTGAGATCGCGTGTGCACCCAGCAAGAGGGTTGTAATATAGGGCATCCCAGTTCCGCCATCTCCTGCGTCTATGGAATATTCCACTTCCGCCATCCCCTGTGTCTATGGAATATCCCACTTTCGCCATCCCCTGTATCTATGGAATATCTCAATTCTGTCATCCCCTGTGTCTATGGAATATCCCACTTCTGCCAACCCCTGTGTCTGGGATATCCCACTTCCGCCATCCCCGTGTCTATGGAATATCCCAGTTCCGCCATCCCCTGTGTCTATGGAATATCCCACTTCCGCCATCCCCTGTGTCTATGGAATATTCCACTTCCGCTACCCCGTGTCTATGGGGTAGCCCACTTCCACCATCCCGTGTCTATGGGGTAGCCCACTTCCGCCACCTCCTGTGTCTATGGGGTATCCCACTTCCGCCATCTCGTGTCTATGGGGTATCCCAGTTGCGTCATGCCCTGTGTCTATGGGGATCCCACTTCCGCCACCCCCTGTGTCTATGGGGTATCCCACTTACGCCATCCCCTGTGTCTATGGGGATCCCACTTCCGCCACCCCTTGTGTCTATGGATATTCCACTTCCGCCACCCCCTGCGTCTATGGGGTATCCCAGTTCCGCCATCTCATGTGTCTGTAGGATATTCCAGCTCTGTCATCCCCTGTGTCTGTGGGGTATCCCACTCCCGCCATCCCCTGCGTCTGTGGGATATTCCAGTTCTGTCATCCCCTATGTCCTTGAGAACCAGGATTCTCCGTGGGGCTGAAGGGAGGTGCAGATGTCACAAAGAAAAGGATGAATGAAAACTTTAGTCCTGAATTTCTATGGGAAGTATCAGTGTGAACTCAGGAATTTTATCTTAAAAAAAAAAAAAAAAGCATTTCCAGATTTTGCTCTAGAAACATTTATCTCCCGTGGAGGGGAAACCTGGGCTTCCTGGAGTAGTGGTGCTGCAGGTGGGGCAGGAGGCGTAGAGGTAGAGCCTGGGGCGTAGGGGATCTGGAGTGGAGGACCGCCCCCCAGCCCATCCCCTCGGGACCTCAGCTGAGTCCTTCAGTGAGAGGACAGTGATAGTGTTGGCCATGGATTAAATGTGGTAATCCACGGAACACATTTAGCCCAGGGCCAGGCGTCTGGGGACACTGCCCTCCCCCAAGGGTAACTGCTGCCACCATCAGAGTGGCCCCGGCCCTCATTGTTTCTTATTTTTTTAATTGAATGAGAACTCTTGTGCTCCTCACCGTGCTCTTCTCTTGCTGGGAATTCGTTGAATCCCTTTAAAGATGGTGCTGTGAGGTGGAGAAGGCTGTTAGCCTCATTGCTCCTGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGTTTCGGCTTTGGCTTCCGTTTGGCTTCGGTTTCGCCTTCGGCTTTGGCTTCGGTTTCGGTTTCGGCTTTGGCTTTGGCTTCGGCTTCGGCTTCGGCTGCGGCTGCGGCTGCGGCTGCGGCAAGTGGAGCGGCTCATCTTGGCCCATGCGCGGTGCAGACGCAGCCTCTTGTCAGAAACCAGTCTGTGCCTGTGAAGCGCGGTTTCCTGGGCCTTACTGAGATGCAGCACGGGAAGGTTTGCGCAGAGCCCAGGAATCTGCAAGATGTAAAAGAGCCCTGCCTTTTAAGTAATTAAACCCTGTCCATTTAACAGTGCTTAACTCGTACTTAGAAAAAGTAGTGCAGAGATGCCTGTAGAGAAGCCAGATCGCCTACGGCCTAAAGCAGAAAACAGCTCCCACCTCCTGCCTTCCCCACTCCCAGTTTGCCTCTAGAGGAAGGAGCCCCTCCATGCACTCTTTGGGGTTCTCCCTGGTTCTAGGTAAAGAGCTCATGAAATTGCTTTGATAGTTGCAAATCTAATGGGAGGTGAGGACATGGCTCCCACATCCTCTCCCCACTCTCCACTCACTGCGCTCTCCACGTACTGCACACCCGCCCCAGTGCCCCTGTCTTAGCTGCCACTGTGTCACAAGTTTTGTGTTCAGAATTCATGTCGTCATGAATAAATGCTATTCATAGCTGAGTCACAGGGAGCATTGCTACACTTTCTTTCTTCACAGCTTCGAAAACAAAGCAGTTATTTTAATTAAAGGCGTAGAAGCACTTGTAAGGTTCAGATAGTATGGCTCGGTTTACGGTGACAACAAATCTCTTTCCTGCCCGTCCCTTTCTGTCCCCTTCAGTCACACTGCCCCGGGGCAAATAGCTTCTGATGTTTGTTTTTAATTCTCTCTACATCTTTAAGTAATGTGCTTATAACTTACAACATTTTTTGATTTATGTTGACAACGCAGTGGGCTCCATGCCATCTCTCCAGAAGGCTCCCCCCTTCCTGACTTCACCTGGAGTGTTTTCTTCTGCCGCAGGTTCAAGAGCCATATTCGAATACTCTCTGCCTTGGAATAGTGATTCTCACACTGGAGCTGGCATCAGAATCACCTGGGGGGCTTGCTGAAGCACAGGCCCGGCCCGGCACTTTCTCATACAGTGCGTCTGGAGGGAGGCCTGAGCATAAGCGTTTTTGTTTTGTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAATGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTCATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGGCATGCGCCACCACGCCCGGCTAATTTTTGTGTTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGATAGTCTTGAACTCCTGACCTCAAGTGATCTGCCCACCTCGGCCTCCTAAAGTGCTGGGATTACAGGCGTGAGCCACCGCTCCGGGCAGTGCATAAATGTTTTTAATATGTTCTCTGTGGCGCCGATGCTACTGGTCGCAGGATCCCACTTTGTGGAGCACTCCCTTAGCGTGTAGGGTGTGCTGCCTGTGGGTGGGGGATTTAGCGGTGGGCGGCCGCAGTTAGTGGTAGATGGCTGTTTCTTGGACCCAGTCTACTAATGCGCTTCTGGGCATTGCCACTTTGTAGTCGTGTAGCTGTGGGCTGTGACTCGACTCCCTAGTGCCTCAGTTTCTCCCTTGTAAAGGCTCAGTTTTGTGCTCCCAGCTTATGAGGACCTGACGCTGAAGTGTGTAGCGCAGGGGGGCGTCATGGCCCTTCCTTGCGTGTTTGCCAGCGTGGCATCTGGGAGGGTGTTTGGGCTCTGTGTGCTGGGCACCACCGTGCCAGGTGTTGGGATAGAGACTTAGGAGCTTACAGTCTAGTAAGGTCAGGAGTGAGAACGTTGTAATTGTGATTCATGGCTTTGAAAAAACCCTGTGGGGTGCACCTGGGGTGTCCACGGGGGTCAGAGATGCACTTGCTGAGGCCCTCCCACCTGATTCTGTTGCTCTGGACCAGGCCCCAAGGGAGAGCAAATGTAGAAGCTGCACACGGACCCTTCTCAGGAGTGAATGAGCTGGGGAGGAGGCAAGCCCATCCCTCCCGGGAGAGCCCCCAGGGGCAGGCCTGGTGCAGAAGTGTGAAAGGCCTCGTTGACTGCTGGAAGGGCGTCCTCAGTGTAAAGATGTGCAGGCAAAGCCCTGTGTGCCCGAATTGTCCTCACTGAGCAGACAGGAGCCCCCACACCAGGGGCTGACCATAGCCTCTGTAATGGAGGTGGCGTTGAGCCAGGTTTTACTCCCAGGTTCGGAGGTGGGGCTTTCATGCTCATCTCCAATCCCATTACCTGTCTGCAGCCAGGATTGTCTTCCTGGAGCCCGAATGTGACACCATCGCTCCCTGGCGGGCACGTCTTCAGGGTGCCAAACCCACTCCCTGGCTCAGGACCAGGTGTCCAGGGCTGCATTCAAGCCCTGCGGCCCCTCTGCCTAGTGGAACCTTTGCCCGTGAGCCTTCCTCATCCTCTGCCCCCGGCGTCCAGGCTGGTGTTTTGGGTTTCGGGGTCCTTTTCTGGGAGCCTTCCGTGGATCCCGCCCCTCGCCCATGCCTCTTATGTTGCCTGGTTGTTTACAGACCAGGCCTTCTGTGTCTGGGGCATTGTTCTAGAGGTTGGGGGTAAACTGAGGGTCTTAACTCACACAGAGCTGAGGTCTTAGCTGGGGAGAGGGGTAATAAATACTTAGTAAAATGCAGGGAGTGATGCACACTCTGAGGACACCAGGGCAGGTCCTGCGCCAGGGGGAGCGAGGCACCCGAGGCCAGCGTAGCAGCCAAGGCAGGCGTGGAGCCCTTGCCTCTCTTGACTCACCTCCCCCTACCCTCTTGCTTTCCAG
Seq C2 exon
TGGACATCCTCATCATGGATGATGACGACGTCCCCAGCTGGCCTCCCACCAAGCTGTCCCCGCCCCAGTCTGCGCCCCCAGCCGGCCCGCCTCCCCGGCCGCGGCCGCCCGCCCCCTACATCTGCAACGAGTGTGGCAAGAGCTTTAGCCACTGGTCCAAGCTGACGCGGCACCAGCGCACGCACACCGGCGAGCGGCCCAACGCCTGCGCCGACTGCGGCAAGACCTTCTCGCAGAGCTCGCACCTGGTGCAGCACCGGCGCATCCACACGGGCGAGAAGCCCTACGCCTGCTTGGAGTGCGGCAAGCGCTTCAGCTGGAGCTCCAACCTCATGCAGCACCAGCGCATCCACACGGGCGAGAAGCCCTACACCTGCCCCGACTGCGGCCGCAGCTTCACTCAGAGCAAGAGCCTGGCCAAGCACCGGCGCTCGCACAGCGGCCTCAAGCCCTTCGTGTGCCCGCGCTGCGGCCGCGGCTTCAGCCAGCCCAAGAGCCTCGCGCGTCACCTGCGGCTGCACCCGGAGCTGTCGGGGCCTGGCGTGGCGGCCAAGGTGCTGGCGGCTAGCGTCCGGCGGGCCAAGGGGCCCGAAGAGGCGGTGGCGGCGGACGGCGAGATCGCCATCCCCGTGGGCGATGGCGAGGGCATCATCGTGGTGGGCGCGCCGGGCGAGGGGGCCGCGGCCGCGGCAGCCATGGCGGGCGCGGGGGCAAAGGCCGCGGGGCCCCGGTCGCGGCGCGCCCCGGCCCCCAAGCCGTACGTGTGTCTGGAGTGCGGGAAGGGCTTCGGGCACGGGGCCGGGCTCCTGGCGCACCAGCGGGCCCAGCACGGGGACGGGCTCGGGGCGGCGGGGGGCGAGGAGCCGGCCCACATCTGCGTGGAGTGCGGGGAGGGCTTCGTGCAGGGCGCCGCGCTCCGGAGACACAAGAAGATCCACGCGGTGGGCGCGCCCTCGGTCTGCAGCAGCTGCGGACAGAGCTACTACCGCGCGGGCGGGGAGGAGGAGGACGACGACGACGACGAGGCCGCGGGCGGGCGGTGCCCCGAGTGCCGCGGTGGGGAGGGCCGGTAGGGGAGGGGCCCGGGGGGGGGGGCGGGCAGGGCCCCTCGGGCTTGGCGGGAGCGACGACGTGCAAGACCAAGAGACCCAGGGAGAAGCGGACGGGGTGCGATGGACCCCGCGGCATCCCCGGCTCCCCGCCCTCCTCTGTCCCTGCGCCGTCCGTGGGGGGGCACTGGGGCGTATTAGGGCCCGTTCACTTCTCCGCCTCGAGACTCTGCCCCCTCAGCCTGGCCCGCCCTTCCTAAGTTATCGGCCTGCGAGCCGGAGAGACAATGGAGAGAACTGCAGAGGCCGAGTGGCGACCAGGCCCCAAGCGGAAGGCCATTTTCCCTGCTCTTCCTCAGTTGTCCGGGGCGGGGGTGGGGGGTGCTGCGAGGAATGGAGAAACCAGGCCCTTTAGAGGATCCCAGAGAGGGAAGAGAACCAGGGGCCCTTTTCTCTTTTAGAATTTTCTTTTAATCAGCCCACCTTTTGACTCCCCGCCCGCCCCAATCCATTATTTTTTTCTGCCTTCCGGGTCCCATCCTTAGAGCTCGAGTCGTTCCTTCCCCTCCTGGATTCCGGGTAGCAGAGGCAGCGCCGCAGGAGGCGGGTGCCCGTTTGTCCCAGGCCTGGGCGTGGTGGAGGAAGGGGTGCTGGAACAATAAACGGCACTATCCAAATGTC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000142409-ZNF787:NM_001002836:2
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.364
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0009621=zf-C2H2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=7.0),PF097235=Zn-ribbon_8=WD(100=12.3),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.3),PF139121=zf-C2H2_6=WD(100=7.5),PF0009621=zf-C2H2=WD(100=6.4)
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)