RnoINT0168656 @ rn6
Intron Retention
Gene
ENSRNOG00000015456 | Zfp787
Description
zinc finger protein 787 [Source:RGD Symbol;Acc:1310536]
Coordinates
chr1:71434819-71447195:+
Coord C1 exon
chr1:71434819-71434914
Coord A exon
chr1:71434915-71445485
Coord C2 exon
chr1:71445486-71447195
Length
10571 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGG
5' ss Score
10.07
3' ss Seq
CCTTCCCTCTTGCTTTGCAGTGG
3' ss Score
10.37
Exon sequences
Seq C1 exon
CCAACAGGGACCCAGACATGGAGCTTCGGGAAGAAGCTTGGTCTCCAGGGCCACTGGATTCTGAGGACCAGCAGATGGCCAGTCATGAGAACCCAG
Seq A exon
GTGAGGTGGCCTTGGTGGTCCCTCAGCCAACCCCACTGTCTTCCCACCAGGCCAGGGAACCATCCTTTGTGACTCTGGGGTGCCTGGACTCCTGCCCCTTGGCCTCCAAGAGCCCCACACTCCCAGCTTAGAATGAGAGGCTGGTGTTCAGGTCCCTAAGGGTCCTTTTAATAGAACCACCCAGATCCTTGGAGCCATCTTTTGTCTCATGTCTGCAGCTAGCTATTGGTGAGCACCCCTTTTGTGCCCCATATCCTGCTTTGGTTCCATAAGTACCAATTCTGCTTCATGGTTGTTCCTCACGTGGTGGGCCTACAAACCTAGGATCTGGAAGTTGTAATGAACAAGGGAAGGACTGGTAAGGGGAATCTGAGGTCACATGGTAAGATTTGGGAAGGGTGGGCTGGGCTAAATATGAAATTATTCACTTTTAAGTGTTGGCAACATGTGTTCTCTTTGTTTAATAAAGCATTATTGAGTTGAAAAACTCACCTGTGGGTTATATGGAGCCTAGGTTTGTTGGGTAAGACCCATCCTGGCCCACCAACACCCTCCTCCCTCTCCCTGGTGATTCCAGCCTGATGACAAGAAAGCTCATGAGAAGGCACAGTGGGCCAAGTTGTGTGTCTGACACCTGGAGCAGACGGCATTGGCTTCTTCCATATTAATAAATTGGTGCTTACAACACATTGCTTCAGTGTTCCTTAGACTTTGCTTTCATGGCCCAGGGTTGTTGTCACCTCCATCTGTACACTGCCACAAACCCATCTGTGTGGGGTTGCAATAAAGTTTGGCACAATCCTGACAACTTGAAGTACATGCTGACTTGAGGTTCCACTTACGTCTCTTCGCCAGGGTGTGTGAACTCCACTTGGGCAGATGAAACCCAGAGGGCTATGCTGCATTTTATCCTATGCCACCATCACGTGGTAGGCTTGTGGGAAGTGTTGCTGCACCTGCTCAGGGGTAGGAGAACGAAGTCTGAGATGGGGGCCCCAGCCCGGATGAGAAACAGGCAGGCCCAGCTGGGAACCTTGTGGAGTCAAAACAAAGCAGGTCCACTCCCTAGCCTCCCAGGCCTGCAAGGACAAGCCCGGGATTAGGGGGTGGGGGACCACAACTCTGGCTTAGCTCAAGTGTCCTTGAGCGCTGAGAGGCCCTCTGCGGGAGACTTAGGATGAAGACTTCCCCACGGCCCCCACGGCCCCACAGCGGTTCTTGATGACAGACAGCCCTTGATTCTAAACTGTTTATTGATTGATCATCGTGGAGAATAGGTGTATACAACCTCCTTAGGGTGGACCAGAGATTATTACTTTTTTGCAGGAAGGGATGCCCCAGAAGAGAAGAAGCTTATTGGCTAAACCCTGGGAACCTGTCTAGATAGCCCATTAGCATGGAGAACTCTGTGTTCTGTGTCACTTGACAGGTGGCCATGTTCTTTATGTGGGAGTTATGATCACCTGCTCTGGGCCAGGATTCTAGTTGGGAGTAGTAGATGAAACACCTACCGTGAGGTGCTGGGGTTTCTGAACCCACTCAACCATAACATTTCCTGGCATAGTCCACTGCCCCACACTGCCTGTCCTAGTTTCCTGTCTGTTGCTGTGCTAAAGTAACAACATAAGGTAACTTAGGGGAGAAGGAATGTACCTGAACTTTTAATTCCTGGTCCATCATACCATGAAGTCACAGGGGCAGGGGCTTGAAACAGCTAGTCACAGCACATCAACAGTCAGGAGCAGAGGGAAATAAATGCATGTTTGCTAGCTTGGACCCAGTTTGATTTCTTTCCATTTTTAACAGTTTAAGGTTCTCTGATTAGGGGACTGATACCCCCACATCAGTTAACTGATGACAGTTCTCACAGGCACACCCTCAGGACATCTCTGTGTGGACAACCTTCTCTTGAGACTGCACAGGCTATTCTGGGTTGTGTCAGGTTGACAGAGCTGTCCAGCACACTGATGTTGCTTTCCCTAAGCTCTGCTGGCCTCTCTGTCACTCTGACCAGGCACTAATAGTGGTTCTCGCCAAGCACTGCACAGTATTCCTCTGCACAGTGGAAGCCATGCTGTCAAGTTGGCAGAAGATTAGATTGCAGAGTTTTAGAATTCCTTTTTTTTTCTTTTTTGACTGTTGAATTTGCACATTTCTGGGAAGCCTGTTCAACCCAGAGAGGCTAATGCTGCTACTGAGAATGGTATTTTAGTGTGTCCGTAATCATCGTGAGCCTCTATGGGCCATCTTACTAAGAGCACACAAAACCTTGGACAGCCAGGCTGCCTGTTGCTCAGCCGTGCTTTTGAACGGATATTGGTGTGGGGAGATGGGATTGGGGCCGAGGCTGAGCAGTTTGCTTGGGGATGGGGTGCAGGGATGAACTGGGTCTCCCTAGGGCAGTTTCATAATCAAACCTCCTAGACTCCTTTTCTCCTGGTTGTTGCAGCTGCCGAGTTAAATGGGCAGTGGCCATGGCCAAAGGAATCCTCCCAGACTGTCTTGGTCCTTAGCTCAGCAACAGGATATTCAGAAAGAAATAGAATAGCCCCATGAGAAAAGGGCTTCCAGCTGGTATTTTGTAGTCTTCTACTGTGTGATGAGGAGGCTCTGTCCTCCATGTGGAACATAGCATCCACCCTGCTATGCACCTTGGTCACCAGAGAGAGCTCACTTCAGAACTGTAGAATGGCCCGTGAACCTTCCCAGGTCCCTATGTAGGAATACAGCAGCACATAGCCAAACCCCAAATCCAAAACCCTTAGACTGCACTGACAATTATCAGACCTTGAGCATTCTTGCTAGCTCTAGAGGATAGCGGATGGGATAATCACCTCAGCCTGGGTATGTTGGGGTGACTAAGAGGAAGGGAGCAGAAGAGATGACCCTCAGGTGTTAATCGGGGAAGCTTGGGGGCTGGGATAGGGACATATTCAGAAACTCAGCTGAAGTAGGTGTTTTGTGCAGAACCCTGTTGGACGTGAGAGGACAGGGAGGCGAATGCCTGGAGCAGCCTGGTTTCTTGAACCAGCTAGGTCCAACCCTGCAGGACACAGCCTAGAGAGTGAGCCTGTTGGTCCTTGTCATTGTGAGCAGGGAGGAAAGAGGTAGAGAAAATCTGATTGTAACAGGGTGGCCATTGGTGTGACCGCAGTATGAAGCAGCCAAGTCCCTCCTATTGCCTCACAGGTCAGGACACCTGCCTGTACACTGAAAAGAAAACAGGACAGCCTCTTTACAGACAGGTGACCAGGAATACCTTCCCCCTCCCAGAGAGCTGGATTGCTTAGATGTGTTGAGAGAGAATAGGGCACGCAGCAAATCCATGATCATAGAAACTCTTCAGTGGAGCAAATTCAGCAGAGATTAGGAGTCGAAACTCAAACCATCTCAGAATGAAAAGACTAGAAGGAAGTCAAGTGAACAAGCACATTGTCCCCAGTACTAAAGGTGAGGGGATCTAAGAGCATGAACTGATCTTCCAGAGGAATCCCCGATAACTCCAGCTCCAGAGAGCCTGATAATTGGGCTCTGGGCATCTATACCCACACCCACAGCTCCCCCAGCCCTCGTAAGTAAAATTTAAAAATTGTGAATTATAAAATGAAAATGAATTTTTAGTTATTTTGTTTACTTTTTTTTTTTCTTTTTGAGACAGGGTTTTTCTGTGTAACTCTGTCTGTCTTGGAACTTGCTCTGTAGACCAGGCAGGCCTCACACTCAGATCTGCCTGTCTCTGAGTGCTGAGATTAAACGCATGTGCATAACACCACTGCCCAGCAAAGATGAAAAAAATTAAAAGATGCAAATGGAATAAAGAATATTGGGTTTAGAAGAGAACGTGTGATATACATTATCTGAGTCCCTGACACATATAAAGCAAATGAATAGAGTACATGGTAAAACTAATTCATGGGCTGGAGGGATGGCTCGGTGGTTCAGAGTGCTTGCTGCTGTTGCTGAGGACCCAGGTTCTATCCTCAGTACCCATGTCTGGCAGCTCACAGCTGCCTGTAAGTCCAGCTCCAGGGGATCTAGTGCCTCTTGGTTACCCGGACACTTGTGGCATTCATTTACACAGACACGCATGCAAATACAGGTACATCCTAAGCCCTAAATCCAGTGAGGAGCCCTGCCCTGCAATAGAGCTGTTGAGAGAACAAGTCACAAACATCGAGAGGAGCTCTAAAGAGCTGGGGGCTGCGACATGGCTCAGGGGCAGCACACTTGTGTGGCATACCTAGAGCCCTGTGTTTAATCCCCTCTGCTGTAAAGCCAAAACCCAGCTTCCTGGCAGAATGACATAAGGAAAGTAAAGGCAGCTGTTAGACTTCCTGTCGACAACACTTAAGCCTAACAGAAGTCTAACCACGACAGTATGCAGGGTAAGGAGTGAGCCAAGAATGTGAAGGGAGTTGACAAAGAGCAAGAACCAGTTAAGTCCCTTGCCTGTATGCCTTTTCCTGAAAATCTAATGGCAATTGAGCTTTGGACAACCCCATTGACCAGGGAGAGACAGATGAAAGATAGCAGTGAGCATGGCCTTCACTGGAGTGAAGAACCAGCTGGCCACCCAGACACCTGCCTGTGAAGCCAACTGTGAAAATGCAAAGAGCCTCCTTAGGGCACTTAGTATAGCTGTCCTCAGAAGGCAGCATGGCTTAATCCTGTAAGCGACTGCTGTGTTCTGACTGTCCTCATGTGATGAGGTGGCATCTGGAGGGGACTAAATAGCTTAAATAAAACCTTTGGTTTCTGAGGATTCACGTGGCAATCACCAGTGTGGATTTTTATTTGAAAATAAGACACAAAACAGGCACTTTCTGATTTTGCTCCCTGAGTATTGCTTTGGCAAGCTGTGCTTGGAGGGTCTAGGACAAGAGGGATATAAGATAAATGGTACATTGTTGAGGGCACCAGGACCCAGGGAAGACAAGCTTTGAGGAGGCACCCACTCACTAGGGTTGGGCAGTTTTAGCCAAAGGGAATTTAACATGTTTTTGCTGTGGTACTGAGGATCCAACCTGGAGTCTTGGATAGACATTCTAGATAAGAGCCCTACCACAGAGCTACATTCTCAGTTCTGTTTCTACTTCTTATTTTGAGACAGGGACTTGCTAAGTTGACTTTGAGCTCCTGGCCCAAACAGGCCTTGAACTTTCAAACTTGCCTCAACCTCCCACGTAGCTGGGATTGCAGGTCTGTGTCACCAGGACCAGCCTGTAGTTTGTGTTTCCTATGATATTAGGGAAGGAGAGGGAGAGATTCATTCGGTGAAGAATAGAGTACCAACCTACACTTGAATACTGGGCAAGTGCCCTACCTACAGCCTTCTGAAGTGATTCAAGTACCAAGAGCTTGATCCTGATGGGGTGCCTTGAAATCATCACAACTGCTATCCCACAAAACAAAATAGCTGCCCCTTCTGTGTCCAGTTCATTTATGATCTGAGCATTGTCCCAAGGTGATACCAGAAGCCTTTCTAAGAAATGACAGGACAGCATCTCAAGACTGCCTTTGGGAAGGCTGGGGCTACAGAGGGTGGGGTACTAGTCTGCTGGTCCAGAGGTGAGGTTCTGTGTTCATCTTGCTGCTGGGGTGTGTGAACTCTGCTTGGGCAGACACAATGCGGAATGCTAGGCTGCATTTTACCCGTCACCACCATCAGGTGCTTGGTTTGTGGGAAGCACTGATGCACTGCTCAGGTGGGAAAACAGCCTAAGATGGGTGCCTCAGCCAGGGCGAGAAATGGTCCAGGCTAAAACCGAAGCTGGGGTCCCTAAGTCCTGGGTGTCCAGTGGCCACTGGAAGCTGTGAGGATTGTGGAATGGAGGGGTCCACGGGAGGCTGGGGCTGGGGTGACAGGAACGCTGGCTTTGCTTAGCAGCGAATGTCCAGGAGCCTGGGGGGGGGGCTCTGTAGGATGAAGGTTGCTCCACAGTCCCCACGATGGTTCTTGGTGAGAGAGACAGTCCTTGATTATAAACTGTTTATTGATCATCGTGGAGAATAGGTATATACAACCTCAGGGTGGACCAGAGATTAAGTACCTTTTGCAGCAAGGAATGTCCCAGAAGAGAAGCTTATTGGTTAAACCTCAGGACCCATCTTGATACCAATTAGCATGGAGAACTCTGTTGTTCTGTGTCACTTGACAGGTGATCATGTTCTTTATGTGGGGAGTTATAGTCCCCTCTTCCAGGCCAGGAATCTGGTTGGGAGTAGGTGAAACACCTACCGTCCTCAGATATGAGGTGCCTCAGATATGAGGTGCCTCAGATATGAGATATGAGGTCCGAACCCACTCGACCTTTCCGAGTTTCCTGGCATGGTCCACACACTGCCCCACAGATGTACTGTGTAGCCGACAGAGACATGTCCCTGATTCTAACGTTTACAATTTGGTGTATAAATGTTTTGTCTGTGTGCATGTATGTATATCATGTTTCCCCTGTGCCTGGGGAGATCAGAAGAGGGTATCAGCCCCTGGAACAGGAATTACACGTGCTTGTGAGCCACCATCTGGGTGCTGGGAATCAAACCTGAGTCTTCTGCAAGGGTAGCAAGTGCCCTTGACCACTGAGCCATCTCTGAAGACCATACTGAGGTAGAAAAAGTCAGCCCTGTATTTTCTGAGACAGTGCTATCAAGGGGAGCTCACTTCCTAAGCTGACCCTCCAGTCCCCCTGCTAACTTCCTACAGCACCTCTTTCAAACCCCAGTGCTCTTTAGAACCTGCTGTCCTGTGGAGCACAGGTTCTGGCCTACTTCAACCTCCAGGTGTCAGGTAAAAACAAACTCCACTCTTTATGTAATTAGCTCCCCAGTCATTCAGCATCCACTTATTTACAAAACTAAACAGAAGGCAGACTAAACAGAATAACCAGACACCTTAGAGAAAGGCAGTGCCTAAGGAAGACATTGCCTGACCAAAACTCTCCTTGCTCTTTCCCAGCCTTCCCAGGTCTTAGACAGCTCTTCCCTAGATCATCACTTAACACATTATCTGCATATTATCCGCCCTCTGCAGCTGCGTGCGTTCTGTGCTCCCAGACACCGGGCTGTATTCAGCATTCAGATTCCATGTCATGGTGCAAAGACTTGAAAGATGCACACAGTGCCCTGGCCTTCTGAATTTCTAAGCCTTCAGATGTTTTCAGTTGTATTTTGTCTGTGTGTGCGTGGGAGGGTGTGGGCAAGCATGCCACCATGCACACGGAAAGCTTGAGGGTGCTGGTCTTCTGCCACCCTGTGTGTATTGTGACTGAATTCAGATTGTCAGCTTAGAGCGGGCACATTTACCTGCGCAGCCATCCCCAGGCCCATGATGACACTTGAGCACATGTGTATCACTGTATTTTGTTTTTACCCACTTCCTCCACCACGCTTGGGACTGGTCCCTTTCCCCTCTTGGACAGTCCCTCTGCTTTCTTTTCCCCCAGCTGCCATCTAACTGGTCCTGTCCCATGTCCTTTTTACTTTCCTCTCCCACATGGGTGTTTAAGTGTGTGCATTGCGCCGATGCTTGAAGATGTGGATTCTTGTCTTGATCTTCACTCTTCACCCAGTAGTTTGAGCCAAGGTCCCACAGAAACTGAAGCTCCATGTGTCAGTTAGGTTGCCTTGCCAGGGAGCTCCCAGAACCCTTTTGTCTCTATCCACCAGGCAGCTCTGGAGATTCAGGCCTGCACTGCCATGCCTGGCTTTTACATGGGTGTTGGGACAGCAAGTGAGCTCCATCCCCCAACCCCATACATTATAATTTCAGCTATTCTTCTGAAGATACCATACTTTACCTCTGAATAAAATTGCATTGTATGCATGCAAGACATTTTCTTTATGCATTCTTTTGGGGAAGGCTTCTAGGCTGGCCTCATTTCTTGGCAGCGCAGTGGTGATCCACAGTGCAGCAGTGAAGACAGTGGTGCAGGTGCTTCTGCTTTGCCCACTTGGTGCCTACATTTGTTTTCTACTTGAATGATGCTAATTGTTTCTGCCTTAGACTAGTGAGTCTCAGCCTTGAGCATAGAGAGCCACCTGGCTGGGCTTGTGACAGTACAGCTGAAATTGGGGATTAAAGTGAAACATGGAGGTCCTAGGGCTTCACTGGGAGAGCACCCATGGCTAGCTCTGAGATTGGAACTGCTGCAGGTGTGTTGAGTGATCACTGATGTGGCTGTTCAGTGGATCTCGCCGCGCCACTGCAGATCTTGGCTTTCTGGGTCCATCACCATGGGCTGCAACTTCAGTTCCTAGTTCCTGGAACCTGGAATATTTCTTCCGAGGAAGAAGTGCTTTAGCCAGGGCACAGAGCTCCCAAGGACCTTGGTTTTTTTTTTTTTTTTTAATTATTTAATACTTAATAATATTCTTTTGGTTTCCGGGCAAACATCCTTCCTCCCACCCTCCCCTTCCTTATGGGTGTTCCCTCCCAACCTCACCCCTTGCTGCCCTCCCCCCAACAGTCTAGTTCACTGGGGGTTCAGTCTTAGCAGGACCCAGGGCTTCCCCTTCCACTGGTGCTCTTACTAGGATATTCATTGCTACCTATGAGGTCAGAGTCCAGGGTCAGTTCATGTATAGTCTTTAGGTAGTGGCTTAGTCCCTGGAAGCTCTGGTTGCTTGGCAGGACCTTGGTTTTGATCCAAGAGTTTACAGATAGCAAAGAGGATTTGACAATAGTTGATTGGACTTAGAGAAAGATTGGTGTAAGGGTCAGGGTATTGGGAGAAAGGAAACAGAAGAAGGGAGACATGGGAAAGAGTAAGGACTACGGGCCCGGGTCTTGTTCCTTGTGTTGAGGGTGCACGCGTCCTCTCCCAGGATGGTGTGTGCATAGGTGAAAGCAACTTTTCTCTCTAGGACCAACCAAGGAGGGAGTATTTAGTCTTTGTAGTTGTAGCATTGCAGCCAGCGAAGAGTTGCTGTGTGTGGCCTAGAACTCAGGATGTCAAGGAAGGGTATAGCAATAATGTACACTCACCTGTTCCCTCCTTACATATGGGGCTGGTTTCAAGGTCCCACCAATTCAGCTTTAGCCCTCCAGTCAGTTATCACAGTCTGTGATCTTTATCCTCTGGTGAACTTACTTTTGATCTAGCCCCTGAAGGCCAGTGCCGTAAGCCTCCTTTTGAATTTTCTACAACTTTCCCACTCCCCCACCCCCACCATGAGGCTCAGCTGTGATGCTCTGCAGGCAAGAGTTTATAGTGGATCTATGGGGGCATATGAAGTATATATCTACTAAAGGACCTTTTCGTACCTTGTCTTCATGAGTATTGTCATTATCTATTTGGCTTTAGGCTGGCCTCCTTAGGTTTTAAAGCTGGACTTTTTATTGTAGAAGGGACCTTTCCTTAAGTTCACTGTCACCCAGTCCTGATGGGAGATAGGTGGCTTTACAAACCTCTGGACGTTGAGAAGAGGAGCTGTAGATTATTCACATCATTTGTCTCAGAAAGAGGGCTTTGATGGTTGTGTGTTCCCATTGCGAAGTTTCACCTCCCTAGCATCCCATCGTAGAGAAGCAGATTGTACAGCAGCTGCCAGATGTGAGTTTGACCCAGCCTCAAAGTGGGCTACAGTTACTCATCTGCCAGATTACCTCAGAGGCAGCATTTGAGCACCTGGAGCTGGTGACAAAGGTAAAGGGCTTCCAGGGGTCTGTGAGAGCCTAAGAAGAGAGACTTTGGGGTGCCATCTAGGTTGGTTGGCAGGGTATATACCTGATGAGGCCCTGGCATCTGACTGTGGGCCTTGGTTCTGCTGGGAAATGGGGAGGCAGAGGGAATTTGAGGGGTGGGCAGGCCCCTGGAGAGCAGATGTCAAAGTCCACCCAGGCCTCAAGAGCAGGATGACGTAGCCTTGGACAGGACACACCTGTAGAAAGAATGGCCTACCTTGAGAGGTGGGTGTTGTTTTCAGTTGTCCAGACCAAGGTTCCTATACTATAGTTGTCCGTGGTTGTGGTGGTGGTGAGGCAGTCCAAGTTAATTTGTAATAGAGGCTAACTATGTGGGTGGGCCCTGCATGCCCAGATAGAGGGACTAGCACACCTCTAAGCTGGCGTCCCACTCTCTTTGTCCAGCTTGTTTCTCCTTTTCTGTTTCATCTTGCAGTCACAGTTGTCCAAATGTGACATGACTTCCTAGTCTGCAGGCCTGGTTCTCCCATCCTCATTGGGTTTCAGGTGGCACTTGTGTTGAGCTTCTCCTAGCTCCCCTACCCTAGGCCCTCTATAGCTTTGGTCAGTAGACCTTTTTGGGCCTGTTAGCCTTCAGCATTGGTCTGCAGGTTCAGAGAAAGGCTAGCAGAGAGAACATCCACTTGGAAGGAGAACAAGTATTAGGAATCTGGGTTATGAACACAAAAGTACATGAAATACCTTGAGTGGTTGGTCTCCCATGGGATAAGTGCATGGGATAGGCATTGGTACAACCCAGCAGTCCCGGGGTGGAAGAACCCTGGAAGGATGAGCTGTCCTGGGGCACTCACTAAGCTAGAATCCATTGGCATGGTCCCTGTGGGTCTGCCACCTCTGACTTGCCTCCTCCTTCCCTCTTGCTTTGCAG
Seq C2 exon
TGGACATCCTCATCATGGATGACGACGACGTCCCAAGCTGGCCCCCGAACAAGCTTTCCCCACCTCAGTCTGCACCTCCTCCTGGGCCCCCACCCCGGCCGCGGCCACCTGCACCCTACATCTGCACTGAGTGTGGCAAAAGCTTCAGCCACTGGTCGAAGCTGACGCGGCACCAACGCACGCACACGGGCGAGCGGCCTAACGCCTGTACCGACTGCGGCAAGACCTTCTCGCAGAGCTCGCACCTGGTGCAGCACCGGCGCATCCACACAGGCGAGAAGCCGTACGCCTGCTCTGAATGCGGCAAGCGCTTTAGCTGGAGCTCAAACCTCATGCAGCACCAGCGCATCCACACAGGCGAGAAACCTTATACTTGCCCCGACTGCGGCCGCAGCTTCACACAGAGCAAGAGCCTGGCCAAGCACCGGCGCTCCCACAGTGGTCTAAAGCCCTTCGTGTGCCCGCGCTGCGGCAGAGGCTTCAGCCAGCCTAAGAGCCTGGCACGCCACCTACGGTTGCACCCAGAGCTGTCAGGGCCGGGTGTGGCGGCCAAGGTGCTGGCAGCCAGTGTGCGCCGAGCCAAGGCACCCGAGGAAGCCACAGCAGCGGACGGCGAAATCGCCATCCCAGTAGGCGACGGCGAGGGCATCATCGTGGTGGGCCCACCAGGGGACGGCGCTGCAGCGGCCGCGGCTCTGGCCGGGGTGGGGACGCGGGCAACGGGGACACGGTCGCGCAGGGCGCCGGCGCCCAAGCCGTACGTGTGCATAGAATGCGGGAAGGGCTTTGGGCACGGGGCTGGGCTGCTGGCCCACCAGCGCGCTCAGCACGGGGATGGGCTGGGGGCAGTGGGTAGTGAGGAGCCTGCACACATCTGCGTGGAGTGTGGTGAGGGCTTCGTGCAGGGTGCCGCACTTCGGAGACACAAGAAGATTCATGCAGTTGGGGCGCCCTCGGTCTGCAGCAGCTGCGGACAGAGTTTCTATCGGGCGGGCGGAGAGGACGATGGGGAGGACCAGTCTGTTGCTGCGCGGTGTGCGGAATGTCGGGGTGGGGAGGCCCGGTAGGGACGGGGATGCCCGGGGGGTGGACAGGGCCCCTCGGGCTCGGTGGGGACTACCAGCGAGCAAGACCATGAGGGAGGACCAGGGAGAACAAGACCGAAAGGAGCAGCAGCCTTGTCTCCCTCTGTACCCCGTGCTGTCCTGGGTTTGAGGGGACCCGCAGCTATCAGCTATTGGGTTCTCAGGACTGCCCACAGCCTCTCTGCTGACCCGCCCTACCGCCTGGCGGACCAGCCCTTTTTAGGTTCCCATTCTGGGAGCCAGAGACTGAGAGAACTGCGAGAATCAATTGGCACTAGACCCTCAAGAGAAAGACCACTCCAACTACAGGTGTCGGGCTGAGGTGTAAGGAATGGAGACAATCCTGGCCTTATGCATCGAGAGGGTCTTCCTTCTCTTCTAGAATTTTCTTTTAATCATACTGTTTTGATCCCTCACATCCATTATTTTTTCTGCCCCTTGGGTCCTTATCAATTTTCTAGCCCAAGACGTTCCTCTCCCTCCTGTGTTTGCAGTAGCAGAGGAGTGAAGTAGCTTCCTGTTCCCAGCACGGTCTTACTGAGAGGATGGGGTCCTGTGTGTTCCCTGTCCTGGCGGTGGAAGAAGGGATGTGGGGGCAATAAATGGCATTATTCAATTGTCCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000015456:ENSRNOT00000059069:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.349
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0009621=zf-C2H2=WD(100=6.5),PF134651=zf-H2C2_2=WD(100=7.0),PF097235=Zn-ribbon_8=WD(100=12.4),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]