MmuINT1035738 @ mm10
Intron Retention
Gene
ENSMUSG00000046792 | Zfp787
Description
zinc finger protein 787 [Source:MGI Symbol;Acc:MGI:1914359]
Coordinates
chr7:6131491-6143150:-
Coord C1 exon
chr7:6143062-6143150
Coord A exon
chr7:6133172-6143061
Coord C2 exon
chr7:6131491-6133171
Length
9890 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGG
5' ss Score
10.07
3' ss Seq
CCTTCCCTCTTGCTTTGCAGTGG
3' ss Score
10.37
Exon sequences
Seq C1 exon
GGACCCAGATATGGAGCTTCGAGAAGAAGCTTGGTCTCCGGGGCCACTGGATTCTGAGGACCAGCAGATGGCCAGTCATGAGAACCCAG
Seq A exon
GTGAGGTGGCCTTGGTGGTCCCTCAACCAACCCCACTTCTTTCCCACCAGGCCAGGGAACCATCCTTTGTGACTCTGGGGTGCCTGGATTCCTGCCCCTTGCCCTCCAAGAGCCCCACACTCCCAGCTTAGAATGAGAGGCTGGTGTTCAGGTCCCTAAGGGTCCTTTTAATAGCACCACCCGGATCCTTGGAGCCACCTTTTGTGTCATATCTGCAGCTAGCTATTGTTGAGCACCCCTTTTGTGTCCCATTTCCCGCTCTAGTTCCAAGAGTACCGTGTCTGCCTCCAAACCCAGGGTCTGGGAGTTATAATGAATGAGGGAAGGACTGGGAAGGGGAATCTGAGGTCACATGGTAAGATTTGGGAAGGGTGGGCTGGGCTAAATATGAAATTATTCACTTTTAAGCATTGGCAACATGTGTTCTTTTTGTTTAATAAAGCATTATTAGGTTGAAAAACTCACCTGTGGGTTACGTGGAGCCTAGGTGTTTTGGGTAAGACCCATCCTGGTCCACCAACACCCTCCTCCCTCTCCCTGGTGATTCCAGCCTGATGACAAGAAAGCTCATGCGAAGGCACAGTGGGCCAAGTTGTGTGTCTGACACCTGGAGCAGACGGCATTGGCTTTCTCCATGTTAATAAATTGGTGCTTACAACACATTGCTTCAGTGTTCCTTAGACTTTGCTGTCATGGCCCAAGGTTGTTGTCACCTCCACCTGTACACTGCCACATACCCATTTGTGTGGGGTTGCAATAAAAGTTTGGCACAATCCTGACAACTCGAAGTTCATGCCGACTTGAGGTTCCACTTCTGTCTCACCGCCAGGGTGTGTGAACTCTACTTGGGCAGGTGAAACCCAGAGGGCTATGCTGCATTTTACCCTACCGCCGCCATCAGGTGTTGGGCGTGTGGGAAGTGCTTATGCACCACTTGGGTGAGAGAATGCAGCCTAAGATGGGCGCCCCAGCCAGGATGAGAAACAAGGCAGGCTGAGACTGAGGAGGCAGGGGTTCCCAAACTCCCAGCTGGGAACCTGTGGAGTCAGAACGAAGTGCTTCCCTCCTACCCCACCCCCCGGGCCTGCAAAGATGCGCCCAGGACTAGGGATTGGGGGGGCGATAACTCTGGCTTAGCTCGAATGCCCAAGAGCCCTGAGGGGCCTTCTGCGGGAGACTTGGGACCTAGGCTTCCCCACAGCCTGCGTGCTGGATGGTTCTTCATGAGAGACAGTCCTTGATTCTAAAGTGTTTATTGATTGTTCATCGTGCAGAATAGGTGTATACCACTTCCTCAGGGTAGATCAGAGATTAAATGTCTTTTGCAGGAAGGAGTGTCCTAGAAGAGAAGCTTATTAGCTAAACCTCTGAACCCATCTAGATACCTCATTAGCATAGAGAACTCTGTGTTCTGTGTTACGTGACCAGCAGTCATGTTCTTTATATGGGGAGTTGTGGTCACTTGTTCCGGGCCAGGAGTCTGGTTGGGAGTAGGTGAAACACCTACTGTCCTCAGGTGGGTTGCAGGGTTTCTGAACCCACTTGGCCTTACTAAGATTCCTGGCATGGTCCACTGCCCTACACTGACTGTCCTAGTTTCCTGTCTGTTGCTATGCTAAAATAACAGCATAAAATAACTTAGGGGAGAAGGGGCTTATCTGAACTTTTCATTCCAGGTTCATCATGCTGTGACGTCACAAGGTCGGGGGCTTGAAACAGCTAGTTACAGCCCATCCACAGTTGGGAACAGCTAGTTACAGCCCATCCACAGTCGGGAACAGGGGGAATAAATGTGTGTTTGCTAGCTTGGGCCCAGTTGGATTTCTCTCCATTTATTTTATTTTTAAAATCAATCAATCAATCAATCAATCTTATTTATTTATTTATTTATTTATTTATTTATTTAATGTGAGTACACTGTAGCTGTCTTCAGACACACCAGGAAGAGGGCATCAGATCTTATTGCAGATGGTTGTGAGCCACCATGAGGTCTCTGTCTTAAAACTGCTGAGCCATCTCTCTAGCCTGATTTCTTTCCATTTCTAATAGTTTAATTTTCCCTGATTAGGGGAATGCTACCCTCACAGTGGGCTGGCTCTTCCCACATGAGTTAGCTGATGAAGTTCCCACAGACATACGCACAGGACATTTCAGTGCAGACAACCTTGTGTTGAGACTGTCCAGGTTATTCTGGGTTGTGTCAGGTTGACAGAGCTGTCCAGCACACTGATGTTGCTTTCCCTAGGCTCTGCATCATTCAAGTGCTGGCCTGTTTATCACACTCTGACTCGTCACTAATAATGGTTCTTAGCAAGCACTGCCTCTGCACAGTGGAAGCCATGTTGTCAGATTGGCAGAGCACTAGATTGCAGGGTTTTAGGAATCCCTGTTGTTTTTTTGTTTACTCTTAAATTTGCACATTTCTGGGAAGCCTGTTCATAATGCTGCTGCTGAGAATGGCACTTTTAGTGTGTCCTGTCATCATTGTGAGACTTCATGTGGGTCATCTTACTGAGAGTACATAAAACCTTGGACGGTCAGGCTGCCTGTGGCTCAGCCTTTACTTTTGAATCCAGACCCTTCCAGAGGTCTGGATTGCTTAGATGCGCTGATAGAGAACATGGCAAGCAGGAAAAACATGATCATAGAACTCTTCAATGGAGCAAACTCAGCGATGATTGAGTCAAAACCCAAACCATCTCAGAATAAACCACTAAAAGGAAGTCAAGTGGATAAGCATATTGTTCCCCAGATACTAAAGGTCTAAGCATGAACAACTCATCTTCCAGAAGAGCCACCTGTAACTCCAGCTCCAGACGGTCTGATATCCCACCCCCACAGAACCCCCAGAGCACCACCCCCAATACATATAAGTAAGATTTATTTTTAAAATGTGAAAGTGAGATAATTACAAGATGAAAATGATTTTTTTTTTGAGACAGGGTTTTTCTGTGTAGCCCTGGCTGTCTTGGAACTTGCTCTATAGACCAGGCAGGCCTCAAATTCAGATCCATCTGCCTCTGACCGCTGAGATTAAACGCATGCACCACCTCTGCCCAGCAAAAATGAAAAATTTAGAAGATGCAAATGGAGTAAAGAGTATTGGATTTAGGCAGAGAAAGTGTGATATACCTTAGACTGAGTCCCTGACACATCCAAAGCAAAGGAATAGAGTACATGGTAAAACTTAACTCATGGGCTGGAAGGATGGCTCAGTGCTTAAGAGTCTTTGCTGCTCTTGCTGAGGATCCAGGTTCCATTCTCAGCACCCATGTCTGGCAGCTCACAACTGCCTGTAACTCCAGCTCCAGGGAATCTAGTGCCCTCTCTGGCCTCTTGGTTACCTATACACTTGTGGTATTTATTTACGCAGAAACATGCACATGGCCAATATAGACACAACCTAAAACTTAATTCAAGTGAGGAGCCCTGCCCTGCAATAGAGCTGTTGAGAGAACAAGTCACAAACATTGTGAGGAACTATAAAGAGCTGGGGGCTGGGGTATGGCTCAGTTGCAGCACACTTGTGTAGCATGCCTAGGGCCCTGTGTTTATCCCACCTGCTGTAAAACCAAAACCCAGCTTCCTGACAGAATGACTTATAAGGAAAAGTAAAGGCAGCTGTTAGACTTCCTGTCAGCAACACGTAAGCCTGACAGAAGTCTAAACATGGCAGTATGCAGGGTAAGAGGGGTAAGCCAAGAATTTGAATGGTGTTGACAAAGAGCCAGTTAAGTCCCTCGCCTGTGTGCCTTTTCCTGAAAATGTAATGCTCACTGAGTTTTGGATAACCCCAGTGACCAGGGAGAGACATATAAAATGTGTCAGTGAGCATGGGCTTCATTGGAGCCAAAGGACTAGCTGGCCACCCAGACACCTGCCTATGAAGACAGCTGTGAAAATGGAAAGAGCCTCTTTTAGGGCATTTAGTGTAGCTGTCCCCAGAAGGCACCATGGGTCAATCCTACAGGCGACTGCTAAGCTCTGATTCTGTCATCACAGTGACAAGGTGATGATAGGCAGCATCTCCATGGAGAAGAGGAGGGGACTAAATAGCCTAAATTTAAAAACAAAAACAAAAACAAAACCCAAAAAACCTTTGGTTTATGAGGATTCATATGGCAGTGTGGAGTTTTATTTGAAAACAAGACAAAAAACAGGCACCTCCTGATTTTACTCCCTGAGGACTGCTTTGGCCAGCTGTTCTTGGAGGACCTAGGGCAAGAAGCATACATATAAGGTGAATATATAAGGTGAAGCATATAAGGTGAATGGGACGATGAGGGCACCAGAGCCCAGGGGAGACAATAAGCTTTGAGGAGGTACCCACTCACTAGAGTGGGGCAGTTTAGCCAAAGTGAATTTAACATAACATTTGTTTTTGCTGTGGGTTTTGCTGAGGATCCAACCTAGAGTCTTGGATAGACATTTTAGATAAGGGTGCTACTACAGAGCTACATTCCCAGCCCTGCTTTTACTTTGTATTTTGAGATAGAGTCTTGCTAAGTTGGCTTTGAGCTCCTAGCTCAAGCAGGCCTTGAATTTTCAAACCTGTCTCAGCCTCCCACATAGCTTGGGATTGCAGGTCTGTGTAACCAGGCCTGCAGTTTGCCTTTCTTATGATATCAGGAAGGGAGAGATTCATTTGGTGAAGAATAGAGAACCAACCTACACTTGAATACTGGGCGCAAATGCTCTGCCTACAACCTCCTGAAGTGATCCAAGAGCTTGACCCTGATGGGGTGTCTTGAAATCATTACAACTGCTATCCTACAAAACAAAATAGCTGCCCCTTCTGTGTCCGGCTAGTCTATGGTCTAAGAGTTGTCTCAAGGTGATAGAGGAACCTTCCTGAGAAAGGACCGGGCAGCATCTCAAGACTGTCTTTAGACTGGCAAAGGTGGGCTGCCAGTCCAATGGTCCAGAGGTGAGGTTCTGAGTTCTGTCTTGTTGCTGGGGTATGTGAACTCACTCAGGCAGACAAGACACAGAATGCTAGGTAGCATTTTACCCTACGCCAACATCAGGTGCTGGGTATTTGAGAAGCACCGCTTGGGTGGGAAAATGCAGCCAAAGATGGGTACTTCAGCGCAGGTGAGAAACGATGCAAGCTGAGACTGAAGCTGGGGTTCCCTAACTTCTGGGTGTCCTGTTGCCACTAGAATCTGGGTGGAGTGTGGAATGGACGGGCCCTTGGGAGGCCGGAGCTGGGGGCACAGGGAACTCTGGCTTTGCTTAGCAGTGAATGACTGGGGAGCCTAGAGGGCCCTTCTGCAGGAGACTTAGGAGGCAGTGTTGCTCTGTAGGATGAAGGCTTCCTCCATGGCCCCCACGATGGTTCTTGATGAGAGAGACAGTGCTTGATTCTAAACTGTTTATTATTGTTCATCGTGGAGAACAGGTGTTTACAACCTCCTCAGGGTGGACCAGAGATGAAATGTCTTTTCAGGAAGGAGTGTCCTGGAAGGGAAGCTTATTGATTAACCCCTAGAACCCATCTAGATATCTCATTAGCATGGAGAATTCTGTTCTGTGTTACGTGACCAGGGGTCATGTTCTTTGTGTGGGGAGTTGTGGTCATCTGTTCCAGGCCAGGAAATCTGGTTGGGAGTAGGTGAAATATTCCCTGTCCTTAGGTATGAGGTGTTGGGGTTTCTGAACCTACTCGACCTTACCAGGTTTCCTGGCATGGTCCACTGCCCCACAGATGTACTGCATAGCTAGCAGAGTCGTATATCCCAGGTTCTAACGTTCTGAAATTTTATTTTGTGTATAAGTGTTTTGCCTGTGTGTGTTTATGTATACCACATGTTTCCCTGGTGCCTGGGGTGGCCAGAAGAGGGTATTAGAGCCCCTGGAACTGGAGCTACTTTGAGCCACCATGTGGGTTCTGGGAATCAAACCTGAGTCATCTTCAAGGACACCAAGTGCCCTTGACCACAGAGCCATCTCTGAAGACCGTACTGAGGTAAAAAAAAAGTTGTCTGCCCTATCTTTTCAGAGACAGTGCAACCAAGTGAAGCTGACCTCCTAGGCTGACCCTGCTGTCCCCTTGCTAAATGCCCACAGCATCACTTTCAAACCCCATTGCTCTTTAGAACCTGCTGTCCTGTGGAGCACAGGTTCTGGCCTATAGAGCCTCCAAGCATCAGCTGAAAAGGAACCCCACCCTTTAATTAGCTCCCCAGTCACTTAACATCTGCCTATTTACAAACCTGCACACTAAACAGAATAACCAGACACCTTAGGGAAAGTCAGAGCCTAAGGAAGAACTGTGCCTGACCAAAGTTCTTGTTCCTTACCAGCCTTCTCCAGTTCTTAGGCAGTGCTTCCCTAGGTTGTCACTTAACATAGCATGCTCCTCTGCCCCCTGCAGGTCCTTGTGGCCTGAGCTCCCAGACTTCTTGCTGTATTCAACATTCAGATTCCATGTCATGACTGCAAATACTGTTCAGAGATGCACACAGTACACTGGCACTCTGAATCTCTAAGCTTTAAAATGTTTTCAGTTCTATTTTGTCTGTGTGTGTATGAGAGGGTGTGGGGCAAGCATACCACCATGCACATGGAAGCCAGAGCAGAGCTTGAAGGCGTTGGTGGTCTTCTACCATGTGTGCATTGTGACTGAATTCACATTGCCAGGCTTAGGGCAGGCACATTTACCTGCCCAGTTGTCTCCCAGGCGCCATTATGACACTTTAGCACATATGCATTACTGTATTTCGTCTTTACCCACTTCTACCACCACCCTTGGGACTGGTCCCTTTCCCCCTCTTAGATAGTCCTCCTGCTTTCCTCTCCTCCCTCTGCTGTCTGGTCCTGCCCCGCCCCTGTTCTACGTTCCTCTTCCACATGTGTATTTAAGTCAGTCAGTCAGTCTCTGTCTCTACCTCTGTCTCTGTCTCTGTCTCTTTCTCTCTCTCTCTGTCTCTGCCTCTGTTTCTTTCTCTCTCTCTCTCTGTCTCTGCCTCTGTCTCTTTCTCTCTGTCTGTCTCCCTGTCTCTGTCTCTCTCTGTGTATACATATCAATGCTTGTAGATGTAGATTCTTGTATTGATCTTCAGCTGGTAGTTTGAGACAAGATCTCACAGAAACTGAAGTTCCATGTGTCACTCAGGTTGCCTTGCTGGGGAGTTTCCAGAATCCATTTGTCTCTACCAACTAGGCAGCATTGAAGATTCAGGACTGCACTGCCATGCCTGGCTTCTACATAGGTGTTGGGTATTTGAACTTGGGACCTTTTGCTTTCACAGCAAGTGAGCTCCATCCCCTTAACCCTGTACATTATACTTTCAGCTATTTTTCCTAAGATTTCATTCTTTACCTCTGAATAAAATTGTATTGTATGTATTCAAGACATTTTCTTTATCCGTTCTTTTGGGGAAGGGCTTCTAAGTTGGCCTCATTTCTTGGCAGTTGTGATTAACAGTGCAGCAGTAAACACAGTTGTGCAGATATCTCTGCTTTGGCCACTTTGTCTCCATTTGTTTTCTACTTGAATGATGCTAATTGGTTTTGCCTTAGATAGACTAGTGAGTCTCAGCCTTGAGCATGTGGGGTCACCTGGCTGGCTAGTGACAGTACATCTGAAATTGGGGGTTAAAGTGGAAACATGAAGGTTCTAGGGCTTTGCTGGGACAGTCCCCCTGGATACTCTGAGATGGGAACTGCTGCAGATGGGTTGAGTCAATGACCCAGTGTGGCTGTTCAGTAGATCTAGTTGGCCACTGCAAGTCTTGGCTTTCTGGTTCCATCACCACGTACCTGGCACCTGGAACCTGGAATATTTCTTCTGAGGAAGAAGTGTAGCCAGGGCACAGGACCACAAGAACCTTGGTTTTGATCCAAGAATTTACAGATACTAAAGAGGATTTGAAAACAGTTGGTAGGACTTAGAGGGAGAGAGAGATTGATAAGGGTCAGGGTATTCGGAAAAAGGGAAACAGAAAGCCACGTTTTTAATAGCATTTCTTTTCAATAGCGCTTGGGAGACAGGAGAAAGAGTAGTGACTAGGGTTCAGGGCCCAGGGTCCAGCAGGGTCTTGTTCCTCGTGTTGAGAGTGCACACAGGTCCTCTCCCAGGATGGTGTGGGAATTAGGTGGAAGCAGCTCTTCACACTAGGGCCAACCAAAGAGGGAATATTTAATCTTTGTACTTGTAACCTTGCAGTCAGCTAAGAGTTGCTGTGTGTGGCCTAGGACTCTGGATATCTAGGAAGGGCATAGCAACAATGTATACTCACCTGTCCCCTCCTTACTGTTGCAAGCCACCCCTGTCACTTCAGCTTCAGCCCTCCAGTCAGTTGTCGTGGTCTATGATCTTTATCCTCTGGTGAATTTATTTTTGATCTAGCCCCTGAAGGCCAGCGCCTGAACATGAGCTCCAGGCTGCTTCGAGAGTTCCCATCTTAACCTTTGACGTAAGCCTCCTTTTGAATTTTCTACAACTCCCCCACCTCCCAGTGAGGCCCAGCTGTGGTGGTCTGCAGGCAACATTTTATAGTGGAACTACAGGGGCCTATGAGGTATATATTTACTAAAGGGACTCTGTTTTCTTACCTTGTCTTCATGTGTATTGTCATTATCTATATGGCTTTAGGCTGGCCTCCTTAGGTTTTAAAACTGGACCATTTTATTTATTTATTTATTTAATTTATTTTTTCTTGTAGCAGGGACATTGCCTTACGTCCACTGTTAATCCAGTCCTGACAGGGAGAAAAGTGGCTTTACATATCTCTTGGACTTTGACAAGGGGAGCTATTGACCATTCACATCATTTTTCTCAGAAACCTGACTTTGATGGTTATGTGTCCCCATTGCAAAGTTCCACCTCCCTAGCATCCCATCAAAAAGAAGCAGGTTGCACAGATGTGGGTTTGACACAGCCTCAAAGTGGACTACAGCCACTCATTTGCTGGATTATCTCTGAGGCAGCATTTGAGCACTTGGAGCTGGTGAAAGAGGAAGAGAGTGTCCTGGGGGCTGTGAAAACCTGACAAAGAAGAGATGCCATCTGGGTGGGTTGGCAGGGGGTACCTGGTGAGGCCCTGGCATAGGACTGTGGGCCTTGGTTCTGCTGGGAAATGGGGAGGCAGAGGGAGTTTGAGGGGTGGCCAGGCCCCTGGAGAGCAGATGCCAGGCAAAGTTCACCCAGGCCTCAAGAGCAGGATGAGTTGGCCTTGGACAGGAACACGTGTAGAAAGACTGGGCTACCTTGAGAGGTGGGTGTTTTCAGTTGTCCAGGCCAAGGCTCCTATATTGTAGTTGTCCATGGTGTGTGTGTTTGAGGCAGTCCAACTTAGTTTGTAATAGAGGCTAACTATGTGGGTGGGCCTCACATGCCCAGATAGAGGGGCTAGCATATCTCCTAAGCTACTACTGTCCCACCCTCTTTGTCCAACTTGTTTCTCCTTTTCTGTTTCTCACCCACAGTTAGAGTTGTCCAGATGTGACAGCAGTACTTCCTAGCCTGCAGACCTGGCCCTCCCATCCTCACTGGGTTTCAGGTGCCACCTGTGTTGTGCTTCTCATTGCCCTCCTACCCTTGGCCCTCGATAGCATTGGTCGGTAGACCTTTATGCAGGCCTGTAGCCTTAGGCATTGGTCTGCAGATCTAGAGAAAGGCTACCAGAGACAACACCCACTCGGAAGGAGATCAAGTATTAGGGAGATGGATTATGAACACAGAAATACTTGAAATGCCTTGTGTGGTTGGTGTCACACGGGATAAGGTGTACTGGATATGCATTGGTACAACCCAGCAGTCCCCAGGTTGGAGGAACCCCGAAAGGAAGAGCTGCCCTGGGCCACTCAATAAGCTGGAATCCATTGGCAGCCTGCGCATGGATGTTCACCTCTGACTTGCCTCCTCCTTCCCTCTTGCTTTGCAG
Seq C2 exon
TGGACATCCTCATCATGGATGACGATGACGTCCCCAGCTGGCCCCCGACCAAGCTGTCCCCACCCCAGTCTGCACCTCCTCCTGGGCCCCCGCCCAGGCCGCGGCCACCAGCACCCTACATCTGCACTGAGTGTGGCAAAAGCTTCAGCCACTGGTCGAAGCTGACACGACACCAGCGCACGCACACAGGCGAGCGGCCCAATGCCTGTACCGACTGCGGCAAGACCTTCTCGCAGAGCTCGCATTTGGTGCAGCACCGGCGCATCCACACAGGCGAGAAGCCATATGCCTGCTCAGAGTGCGGCAAGCGCTTTAGCTGGAGCTCCAACCTCATGCAGCACCAGCGCATCCACACGGGCGAGAAGCCTTATACTTGCCCCGACTGCGGCCGCAGCTTCACACAGAGCAAGAGCCTAGCCAAGCACCGGCGCTCCCACAGTGGTTTAAAGCCCTTCGTGTGTCCGCGCTGCGGCCGTGGCTTCAGCCAGCCCAAGAGCCTGGCACGCCACCTGCGGTTGCACCCAGAGCTGTCAGGGCCAGGTGTGGCAGCCAAGGTGCTGGCAGCCAGCGTGCGGCGCGCCAAGGCACCGGAGGAGGCCACAGCAGCGGACGGCGAAATCGCTATCCCAGTGGGCGATGGCGAGGGCATTATTGTGGTGGGCCCGCCAGGGGATGGTGCTGCAGCGGCCGCAGCTCTGGCTGGGGTGGGGACGCGGGCAACGGGGACACGGTCGCGCAGGGCGCCGGCGCCCAAGCCGTATGTGTGCATGGAGTGCGGGAAGGGTTTTGGGCACGGGGCTGGGCTGTTGGCCCACCAGCGCGCTCAGCACGGGGATGGGCTCGGGGTAGCGGTTGGTGAGGAGCCTGCACACATCTGCGTGGAGTGTGGTGAGGGCTTTGTGCAGGGTGCCGCACTGCGGAGACACAAGAAGATCCATGCAGTTGGGGCGCCTTCGGTCTGCAGCAGCTGCGGACAGAGTTTCTATCGGGCGGGTGGAGAGGACGATGGAGAGGACCAGTCGGCTGGTGCGCGGTGTGCCGAATGTCGGGGTGGGGAGGCCCGGTAGGGACGGGGAGGCCCGGGGGGTGGACAGGGCCCCTCGGGCTCGGTGGGAACTACCAGTGTGCAAGACCACGAGGGAGGCCCAGAGAGAATCAGACCGAAAGGAACAGCGGCCTTGTCTCCTTCCTTACTCCGTGCTGTTCTGGGTGTGAGGGGACCTGCAACTATTGGGTTCTCAGGACTGTCCACAGCCTCTCTGCCGACCCGCCCTACCGCCTGGTGGGCTGGCCCTTTGTAGGTTTCCATTCTGGGAGCCAGAGACTGAGAGAACTGCAAGGATCAATTGGCACTAGACCCTCAAGGGAAAGACCACCCCCACTACAGGTGTTGGGCTGCGGTGTCGTAAGAAATGGAGGGAATCCTGGCCTTATGCATCAAAAGGGCTTCCTTCCCTTCTAGAATTTTCTTTTAATCATACTGTCTGACCCGTCCCATCCATTATTTTTTCTGCCCCCCATGGGTCCTTATCAATTTTCTAGCCCAAGTCGTTCCTCTTCCTCTTGGATTTGCAGTAGCAGAGGCGTGAAGTAGCCTCCTGTTCCCAGCACGGTCTTATTGAGAGGTCCTGGCAGTGGAAAAAGGGATGTGGGGGCAATAAATGGCATTATTCAATTGTCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000046792:ENSMUST00000094870:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.376
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0009621=zf-C2H2=WD(100=6.5),PF134651=zf-H2C2_2=WD(100=7.0),PF097235=Zn-ribbon_8=WD(100=12.4),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.3)
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types