HsaINT1011311 @ hg38
Intron Retention
Gene
ENSG00000197653 | DNAH10
Description
dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
Coordinates
chr12:123774149-123781299:+
Coord C1 exon
chr12:123774149-123774264
Coord A exon
chr12:123774265-123781079
Coord C2 exon
chr12:123781080-123781299
Length
6815 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAAC
5' ss Score
7.82
3' ss Seq
TCATAAAATTGGCATTTCAGGTT
3' ss Score
6.19
Exon sequences
Seq C1 exon
AGGCAATCTCTGAAGCTACCGACATGAAGGAAGCTATGGAAATTATGCCAGAAACACTGGAGTATGGAATTATAAACGCTAATGTGCTCCATTTTCTGAAGAATATTATATGTCAG
Seq A exon
GTAAACATGGAGAAAGGAAGAAATTCTAGTATTTCTAAAGTTGAGGTCATGTGGTTTGTTTATTCCACAAATAGGTAGCGGGCAGCTCTTCTGTCTCAGGTGCTGTTATGGGCACTGAGGTGCTGAGACCAGCTCGGTTGGGGAGACCCTAACCCAGCGGCGCTAGAGAAATTAAAGACACACACACAGAAATATAAAGGTGTGAAGTGGGAAATCAGGTGTCTCACAGCCTTCAGAGCTGAGAGCCGCAAACAGAGATTTACCCACATATTTATTAACAGCAAACCAGTCATTAGCATTGTTTCTATAGATATTAAATTAACTAAAAGTATCCCTTATGGGAAACGAAGGGATGGGCCGAATTAAAGAAATAGGTGGGCTAGTTAACTGCAGCAGGAGCATGTCCTTAAGGCATAAATCGCTCATGCTATTGCCTGTGGCTTAAGAATGGCTTTCAGCGGTTTTCCACCCTGGGCGGGCCAGGTGTTCCTTGCCCTCATTCCCGTAAACCCACAACCTTCCAGCTTGGGCGTTGGGGCCATTATGGACATGTTACCATGCTGCAGAGATTTTATTTATGGCCAGTTTTGGGGCCAGTTTGTGGCCAGATTTTGGGGTCTTGCTCCCAACACTGAGGGTCAAGCAGTGGACAGGACAGGCAATGGCCCTGCTCTCCAGGAGCTTATGTAGGGGAAAGACATGGCACACAAGCACATCTATGAGAAAATACCGACAAGTGGCATGAGGAAAATAAACCCTGATATGAGACAGAAATAGGCATGTGCACTGTGTGTGTGCAGAGGGCATGGTGAGGAATGGCCTTGCTGAGGATGTGATGTCTAAGCTTTCTTTTTTATTTTTATTGTTTTTCGAGACAGGGTCTCTCCGCCATCCAGTCTGGAGTGCAGTGGCCCAATCACGGCTCACTGCAGCCTCAACTCTCAAGTGATCCTTCTGCCTCAGCCTCCTGAGTGGCTGGGATTACAGGCATACACCACCATGCCTGGCTCATTTTTGTACTTATTGTAGAGACAGGGTCTCACCATGTTGCCTAGGCTGGTCTCCAACTCCTGGGCTCAAACAATCTGCCCGCCTTGGCCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACCATGCTTGGCCTGAGCTTTATAGACCAAAAAAATGAAAAACTCATCAGCAGGCCTTTTTCATGAATGATAAGTTATTAGGGAAATGCACTAGGGAAGGAAGGAAGAGGTGATATTGAACTGAGACCCAAATGAGGCCAAGGCATCAGACATGATAGGATGTGGAGGAAGAGCATGCTGGGCAGAGAGAACAGCAGGTGCAAAGGCCCTGAGGTAGAAGCAGCCTCAGCTTGGCCCAGTAGCAGGAGGATGGCCACTGTGGCTGGAGGGAGGGCTGGAAATGAAGGCAGGTTTAAGCAGGGGAACAACAGGATCTGGTTTGCATTTTACCTCTGGCTATTGTGGGAAAACATATTGCTGGGGTGGAGGGGAAGGAAAGACCAAATAGAAAGCCATGGAAGAGCCCAGGTGGAGGGCTGTATTAGTCCATTTTCATGCTGCTGTAGGGAACTGCCCATAATTTATAAAGGAAAGAGGCTAAATTGAGTCACAGTTCTGCATGGCTGTGGAGGCCTCAGGAAACTTAAAATCATGGTGGAAGGGGAAGCAAACACATCCTTCTTCATATGACGGCAGGAAGGAGAAGTGCTGAGCAAAGAGGGAAAAGCCGCTTATAAAACCATCAGATCTCATGAGAACTCACTCACTATCATGAGAACAGTGGCATGGGGGTAACCTCCCCCATCATTCAATTACCTCCCACCAGGTCTCTCCCATGACACGTGGGGATTATGGGAACTACAATTAAAGATGAGATTTGGGTGGGGACACGGCCAAACCACATCAAGGGTGATGGTTATTTAGGCTCCAATCAGGGGAGGGAGGGAGAAGCAGACAGTGTGAGGAATGCCTTGAGGATCAGGCCATGGGACTTGCTAATGACCGGGATCTGGAGGCTTTGAAGAGTATCACAAGAATAGAGAGTACCAAGAATGACTCTTGGTCCCAGCACTTTAGGAGGGTGAGGCGGGAGGATCGCTTGAGGCTAGGAGTTTGAGAACAGCCTGGGCGATATAGCAAGGCCCCATCTCTAAAAAAAAATTTAAAAAAGAATGACTCTTAGGATTTGGGCCTGAGAAACTGGGAGGATGGTGAAGTCATTACTGAGATGGAGGATGGGGAGAAACAGATATGGAGGGAAACTCAAGTGTTGTATTTTGCATTCTAGACGGGAAGGTTGCAGAGTATGGTGGTCATGCCACTGCACTACAGCCTGGGTGACAGAGAGATATTCCATCTCTAAAAAAAAAAAAAAGAAAAATAAATTAAGATAACATCAAAACATGATGTATAATGTTAAGCACAGGTGGCCTCTTAGACATTCAAATCAAGACGTGAAGCAGGATGTATGAATCTGGAGCTCTGCGGGGAACTCAGGGCATCCGTCTAGCAAATATTCATTGAGCACCTACTGTATTTCATAGCAATGAACAACTGAGACAAGGTCTCTGCCTCGTGGAGCTTTCATTCTAGACAGGAAGATGTACATTAACCAAGATCAATGAGAAAATATATAGTGTGTTAGACAGCAACAAGAGTTAGGGAGAAAAATGAAGCCAGATAGGAAAGAAAAAGGAAACAAGGGGGAGAGGGAAAGTTGATAGGTGGAAAGGTGGGGCTTTTGCAATTTTAGATAGGGTGGCCAGGAAGACTTCACTGAGAAGATTTGGACAAAAAAGTCCAAACCAACACAATATCCTCTTTTGCTTGGACTATCGCAGGAGCCTCCAAAAAGATCCCTCAGTTTCTGTTCTTACCCTCTACGCTGCCTTCTCCACATGCCAACCAGAGTGATGCTTTAAAACATGGGCATCATCAGCACAGAGATGGTGTAAAACCAAGGGACTGGGTGGAACAACCAAGGGAGGGAGTAGAGATGGAAGAGATGAGGGGAGAGGAAAGTTAGGACGTGGGTGATCCAGAAGCCAAGAGAAGACAATGCTTCACTGAAGAAGGGAGGGGCCCGCCGTGCCACTTGCTGCTGGAAGTCAAGAAGGCACAGGCAAAGAAGAGCTGGAGGGCTTGGCCCTGGGTGACTTCCATGTGAGCAGTTCTGGGGATGGGAGCAGACGAGGTCTCACGGAGTACAAGTCATCCTGTGAGTTAGGCTGTGGGGCCCTCCCCACTGAGCTGCCTGCACACAAGGGACTTTCTACCTGAAGACAACCTCCTTCATCGGGATGATGTCTTTTTCTAGTGTGACTTTGGAGGACTCAAGAACATTGGCTACCTTCTTATTTATTTATTTATTTTTATTTACTTATTTTTGAGACAGCGTCTCATTCTGCCACCTAGGCTGGAGTGCAGTGGCGCGAGCATGGCTCACTGCAGCCTTAACCTCCCAGGCTTAAACGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGAGGATTACTAAAAATTAGCCAGGTGCACGCCACAATGCCTGGATGATTTTTGTATTTTTTTTTTAAAGACGGTGTCTCAGTATGTTGCCAAGGCTGGTCTCAAACTCCTGGGCTCAAGTGATCTGCCCTCCTCGGCCTCCCAAAATGTTGGGATTGCAGGCATGAGCCACCATATCTGGCCACACTGGCTACCTTCTTATGCAAACTGAACTTTTCATTCTAAAATAACAAAATAACATCAACCCCATCTCTACCAAAAAGAAAAAGAAAAATCTGCTGGGCATGGCTGTGGGTGTCTGTAGTCCCAGCTACTCTGGAGGCTGAAGTGGGAGGATCGCTTGAACCCAGGAGTTTAAGGTTGCAGTGCATGGTGGTCATGCCACTGTACTACAGCCTGGGTGACAGAGAGATACTCCATCTCTAAAAAAAAAAAATGAAAAATAAATAAGATGACATCAAAACATGATGTATAATTAATTCTTAGTGGTTATATGCATTATGACAACCAGTCATGTCTAAAGGACACAGGGCTCAACTTGAAGAGGCTCATGCCAGCCACAGATGGGATATTTTGACCTTCAGTAAGGATAAAATTGCAGTGGGTTGAAGCATAGAAAATATATTCAAATACAGCCAGGCGCAGTGACTCGTGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGATGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGATCAATATGGCGAAACCTCCATCTCTACTAAAATTACAAAAATTAGCTGGGCATGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGGAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGGTCATGTCACTGCACTCCAGCCTGGGTGACAGAAAGAGACTCCATCTCAAAAAAAAAAGAAAAAAAATATATATGTTCAAATGCATGAGTTAAAAACATTTTTTTAAGAGACACAGTTCTTACTCTATTGCTCAGGCTATAGTGCAGTGGCACAATCACATCTCACTGCAGCCTCAAACTCCCAGGTTCAAGTGATCCTCCCATCTCAGCCTCCGGAGTAGCTGGGTCTATAGGTGCACACCACTAAGACTGTCTCATTTTTTTTTTTTTGAGGCGGAGTCTCACTGTGTCGCCCAGTCTGGAGTGTAGTAGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTAGAGAGAGGCACCCGCCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGTTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGCGATTCACCCGCCTCGGCTTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCGGCCTAATTTTTTTCTTTTAATTGTAGAGATGGGGTCTCCCTATGTTGCCCCGGCTGTTCTCGAACTCCTGGGCTCAAGAGATTTTCCCGCCTTGGCCTCTCAAAGTGCTGGATTACAGGCATAAGCTACCATGCCCAGCTTTTCAAATCCATGAATTTATAATGATCTTTAAAAGTCCTGATGGGTCATTTCTGGAGGATGATAGGGGACCACTGTACTATTTCAAAAATTGGGCAAATAAAGAGGAGTCAAGCATTTATGTTGCCTTCCCCATATGAAATGTACGGGATCATCTAGCAGTAGCTGTGAGAGGCGTCTTTATATCAGCATCTCAGCTAATAAACAGACATTTTAGAACATTTCAATTTTGGAACCCCCACTTGATTAATGGACCTGGGGGTGGGGGAGAGAGAGAGAGAGAGAAACAAAACCAAAACCAAGAATTTGATTCCTGATGGAAGATACACCCTGGTCAAGTCTCTGGTCCCAGCTGCCAATTTGCAGGAAATACACATCACAGAGGAACTTCAACTGCACAGTGAGTGTGTAGTCAGCAAAATTTGGATTGGGCAGCTCTACAAATCCAACATTCTGGGTTCTTCAGTATGTTGCAGGAAATACATATAGATTCAAAGAGTCATAAAAAGATGTATCAAAATTTTAAGAAATATAGACAAAACTAAAAAACAAAAACAAAACTCAGCCAACCAACCAACCAACTTAATCAACCCACAGGCATTTATAGATCACTTTTTATGTGGGCTGGGGGCTAAGTTGTTTCGTAATTGTATTCAGGTGACTTCATAAATGCATGCTTCTCTCTCTAGCTACATTTTGAAGAAACTATGTCCTCAAGAACTTAATTTTCAAGAACAAGATGGTCCTGAGCTGATGGTTTAACACAGTTTCTTACCTCCCTGTGCCAGTTTCCCCTCCCTCCCTCCCTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTGAGACAGGGTCTTGCTCTATCGCCCAGGTTGGAGTGCAGTGGTGCGATCTCGGCTCCCTGCAACCGCCGCCTCCTGGTTCAAGCAATTCTCATGCCTCAGCCTCCCGAGTAGCTTGGACCACAGGTGTGCACCACCACACCCAGCTGATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCAGCCAGCTCCCTGTGCCACAGTTTGTAACTTCTCAGTTACTGGTGGTATACAGAAATAACAGCACTGTTTTTGGGGCAGTTGTGTCAGGCCTGGTTAAAATTGATGCCCTTGGATCACTTTAAGTCAAATGTAATCTCTCTGTCTTTAGGTCTGTGCTCCGGTTTGAGTGGTTTTCACTTTGCATATTTGTATCTCAATATAAAAGAATATTCAGGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGGGGGTGGATCATGAGGTCAGGAGATCGAGACTAGCCTGGCCAACATGGTGAATCCCCATCTCTACTAAAAATACAAAAATTAGCTGGGTGTGCTGGTGTGTGCCTGTAATCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATCGCTTGCACTGGTGAGGTGGAGGTTGCAGTGAGCCAAGTGCACAGCACTCCAGCCTGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAATATTCAAAACCAGAGGCAATTTGAATAAAGAATATTCAAAACCAGAGGCAATTTGAATACATGAATTATTGAAAATGACTTCATATGATGTATTTCATAAAATTGGCATTTCAG
Seq C2 exon
GTTTTTTTGCCAGCATTGTCCTTCAATCAGCACAGGACGAGTACAACCGTGGGAGTCACATCTGGAGAAGTCTCTAATTCCTCTGAGCATGAATCAGACCTGCCGCCCATGCCTGGGGAGGCAGTAGAATATCACAGTATTCAATTAATACGGGATGAATTTTTAATGAACGTGCAGAAATTTGCAAGTAATATTCAAAGAACCATGCAGCAACTTGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000197653:ENST00000409039:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.154 A=NA C2=0.286
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains