MmuEX0053024 @ mm9

Exon Skipping

Gene

ENSMUSG00000052675 | Zfp112

Description

zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]

Coordinates

chr7:24907253-24912971:+

Coord C1 exon

chr7:24907253-24907379

Coord A exon

chr7:24908938-24909033

Coord C2 exon

chr7:24909854-24912971

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTTTTTTTTTTTACATAGCAC

3' ss Score

8.27

5' ss Seq

CGGGTGAGA

5' ss Score

7.62

Exon sequences

Seq C1 exon

GAGATGGTGACCTTCAGGGATGTGGCTGTGGTCTTCAGCGAGGAGGAGCTGGGGCTGCTGGACGCTGCCCAGTGGAAGCTGTACCGAGAGGTGATGCTGGAGAACTTCAGGATGCTGCTCTCAGTGG

Seq A exon

CACATCAGCCCTTCAAACCGGGTCTGATAGCCCAGCTGGAGAATGGAGAGCAGCTTTGGATGGTGGAGGCTGAAGCCCATGCAGGTGGGCTCTCGG

Seq C2 exon

GAAGAAGAAATGGACATGCTGTGGAGAACGCTGAAGACGTGGAAGTAAACTCCCTTTGTCCCGAGGACCTCTCCTTCTGTCAGACCTGGCCGTGGGGTGCATGCACATTACCCAGTGGTCAAGAGTTCATAAAAAGATGCCAAGGGAGTAATGGTGAATCTCAGAGCCAAGAAGCTTCCCCTCGCCTGGTGTGGGCAGGAATGCCCATGCAGATTTCTGAAGACGGGAATTACGGATTGCCTCCTGCACACGAAGACTCTGCTTCTATGAAAAATCAAGAGTTTCCTCCTCCAAGATCCCAGCAGTCTCAGGGGGAACCATATCTCGGCAGGCCATGTGTGACATGCCAGTGGAAAGGTCAGCAAACATCCATAAGAAATCACTTCTGTAGGTATGGCAGTGTCTGCTGGTCCCCCTACCACAGTGACAATGAGGAGCTATACAGCAAAGGAAAAAGCTATGGTTTCCATGACGACAGAGGAAAGACGGTGAAGGTATTA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000052675-'4-6,'4-5,6-6

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.091 C2=0.241

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1)

Main Inclusion Isoform:

ENSMUSP00000005413