HsaEX6095528 @ hg19

Exon Skipping

Gene

ENSG00000062370 | ZFP112

Description

zinc finger protein 112 homolog (mouse) [Source:HGNC Symbol;Acc:13021]

Coordinates

chr19:44830706-44844694:-

Coord C1 exon

chr19:44844568-44844694

Coord A exon

chr19:44840776-44840871

Coord C2 exon

chr19:44830706-44834089

Length

96 bp

Sequences

Splice sites

3' ss Seq

TGTCCTTTCCTTCTTTACAGCAC

3' ss Score

12.48

5' ss Seq

CAGGTGAGA

5' ss Score

9.22

Exon sequences

Seq C1 exon

GAGATGGTGACATTCAAGGATGTTGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACTCTGTCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTTAGTAG

Seq A exon

CACATCAGCCCTTCAAGCCAGACCTAATATCCCAGCTGGAGAGAGAAGAAAAGCTTTTGATGGTGGAGACAGAAACCCCAAGAGATGGATGTTCAG

Seq C2 exon

GAAGGAAGAATCAACAAAAGATGGAGAGTATTCAGGAAGTAACAGTAAGCTACTTTTCCCCCAAAGAGCTTTCCTCCCGTCAGACCTGGCAACAAAGTGCAGGTGGGTTAATCAGGTGTCAAGATTTCCTGAAAGTTTTTCAAGGGAAGAATTCTCAGTTGCAAGAACAAGGTAATTCCCTCGGCCAGGTTTGGGCAGGAATACCAGTTCAGATTTCTGAAGATAAGAACTATATATTCACTCATATAGGGAATGGCTCCAATTATATAAAAAGTCAAGGGTATCCATCTTGGAGGGCACATCATTCTTGGAGGAAAATGTATCTGAAAGAGTCACATAATTATCAGTGTAGATGTCAGCAAATTTCCATGAAAAATCATTTCTGTAAGTGTGACAGTGTCAGTTGGCTCTCACATCACAATGATAAACTGGAAGTACACAGAAAAGAAAACTACAGCTGCCATGACTGTGGAGAAGATATCATGAAGGTATCATTACTT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000062370-'3-4,'3-3,4-4=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.303 C2=0.100

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.0)

Main Inclusion Isoform:

ENSP00000441990