MmuEX0053065 @ mm9

Exon Skipping

Gene

ENSMUSG00000006720 | Zfp184

Description

zinc finger protein 184 (Kruppel-like) [Source:MGI Symbol;Acc:MGI:1922244]

Coordinates

chr13:22041529-22052354:+

Coord C1 exon

chr13:22041529-22041655

Coord A exon

chr13:22042103-22042198

Coord C2 exon

chr13:22050293-22052354

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTTCCTCCCTCTGAGCAGGGC

3' ss Score

8.62

5' ss Seq

AAGGTATGT

5' ss Score

9.79

Exon sequences

Seq C1 exon

GAATCAGTGACCTTCAAGGATGTGGTCGTGAACTTCACTCAGGAAGAATGGAAACACCTGGATCCTATACAGAGAGATTTGTTCAGAGATGTGACACTGGAAAATTATACACATCTGGTCTCTATAG

Seq A exon

GGCTCCAGGTTTCCAAACCTGATATGATTTCCCAACTAGAGCAAGGGACAGAGCCATGGACTGAGGATTCGTGCATTCCTGTCGGTCCCTTGGAAG

Seq C2 exon

ACTGGAAGAAAAGAGCTGGAAATAGTGTGTCATCCCTAGAACTTGACATTTCTGAAGAGCATCTATTCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTTCAAGCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAACGGAGAAAACAGCACCCACTTGTGAGAGCAACCTCAGTGTGAGCTCAAGCTTCATAACACAAACGGAAGTAGCTCTCGATCAGCCTTCCACTAAAACAAGAGCCAAGCAGAATTCCCACCCAGTTAAAAAGGAGAAGCTGTGTAAGTGCAACGAATGTGGTAAAGCTTTTACTTACTGTTCTGCTCTCATTCGCCACCAAAGAACGCATACTGGAGAGAAACCCTATAAATGTAATGAATGTAACAAAGCTTTCAGCAGAAGTGAAAACCTTATAAACCATCAGAGAATCCATACGGGAGATAAACCGTACAAATGTGACCAGTGTGGAAAGGGTTTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000006720-'5-9,'5-6,8-9

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.455 C2=0.139

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9)

Main Inclusion Isoform:

ENSMUSP00000006903