HsaEX6046038 @ hg19

Exon Skipping

Gene

ENSG00000096654 | ZNF184

Description

zinc finger protein 184 [Source:HGNC Symbol;Acc:12975]

Coordinates

chr6:27418522-27425188:-

Coord C1 exon

chr6:27425062-27425188

Coord A exon

chr6:27424605-27424700

Coord C2 exon

chr6:27418522-27421039

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTTTTCCCTAATGAACAGGAC

3' ss Score

8.17

5' ss Seq

CAGGTAAGT

5' ss Score

10.86

Exon sequences

Seq C1 exon

GAAGCGGTGACTTTCAAGGATGTGATAGTGGACTTTACCCAGGAAGAATGGAAACAGCTGGACCCTGGCCAGAGAGATTTGTTCAGGGATGTGACATTGGAAAATTATACACACCTGGTCTCTATAG

Seq A exon

GACTCCAAGTTTCTAAACCTGATGTGATTTCCCAGTTAGAGCAAGGGACAGAGCCATGGATCATGGAGCCAAGCATTCCAGTAGGTACCTGTGCAG

Seq C2 exon

ACTGGGAGACAAGACTTGAAAATAGTGTGTCAGCCCCAGAGCCTGACATTTCTGAAGAAGAGCTATCTCCAGAGGTAATAGTGGAAAAACACAAAAGAGATGATTCTTGGAGTTCCAACTTGCTAGAAAGTTGGGAATATGAAGGCAGTTTAGAGAGACAGCAGGCAAACCAACAGACACTGCCAAAGGAAATAAAGGTAACCGAAAAGACAATACCCAGTTGGGAAAAAGGCCCTGTAAATAATGAATTTGGGAAAAGTGTCAATGTGAGTTCAAACCTTGTAACACAAGAACCATCTCCAGAAGAGACCTCTACTAAAAGAAGCATCAAACAGAATTCAAACCCAGTTAAAAAAGAGAAATCTTGTAAGTGCAATGAATGTGGGAAAGCCTTTAGTTATTGTTCAGCTCTTATTCGCCATCAGAGAACACATACTGGAGAAAAACCCTACAAATGTAATGAATGTGAAAAAGCCTTCAGCCGGAGTGAAAACCTTATA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000096654-'4-5,'4-4,5-5=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.455 C2=0.219

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF0009621=zf-C2H2=WD(100=3.5)

Main Inclusion Isoform:

ENSP00000211936