MmuEX0053459 @ mm9

Exon Skipping

Gene

ENSMUSG00000074221 | Zfp568

Description

zinc finger protein 568 [Source:MGI Symbol;Acc:MGI:2142347]

Coordinates

chr7:30800085-30810130:+

Coord C1 exon

chr7:30800085-30800208

Coord A exon

chr7:30802186-30802281

Coord C2 exon

chr7:30807237-30810130

Length

96 bp

Sequences

Splice sites

3' ss Seq

TCCCTTTTGTCTTTGGACAGGTC

3' ss Score

10.69

5' ss Seq

CTGGTAAGT

5' ss Score

10.65

Exon sequences

Seq C1 exon

GATCTGAGGTTCGAGGATGTGGTCATTTACTTCTCTCTGGAGGAGTGGGAGTGCTTGCGCCATTCCCACAGGAATCTGTACCGAGCTGTGATGTTGGATAACTACAGCAACCTGCTGTCACTGA

Seq A exon

GTCTTGCTGATACTAAGCCACGGGTGGTCTCCCTTCTAGAACAGGGCAAAGAGCCCTGGATGGTTATGAGGAATGAGACAAAAATTTGGCATCCTG

Seq C2 exon

ATTGGGTGTCTAGGACAGAAGCCAAGGACAGTTCCAAAATTAAAACATTGCAAGAAAAGATGGCAAAAAAACACACATGCCCCACTCTTGAGGACAGCAAGACCAGAGGGGACAGAGAAGTCACACGTGAGCTGGAGGGTCAACAGGTCCATCAGGAGGGACACTTGAGGCAAGCTGCAGTAACCTCTGTCGAGAGGCCTGATTCTGTCCAGTGCACAGCCCATAGGGAGGCTCACCCTGGAGGAAAACCCTGCAGCTCTGAGAAAAGTCAGAAAACGTCCCTGTGCCAGCCACCTCCCATTGAACGTGAGCAACTTCACAGTAAGGCAAAGGCCAGTGAGCATGCACAGCATGGCAAGGTCTTTAATAGCTGCACGTCAGACACGGCTGTGCATCCGAGACCCCAGGAAAGCAGAAAAGACAGTGAGAGGAAGAAAAGTGCCCTTGCTGGTGGTCCTGACACCTCGAAACCTCAGAGCGCTCAGGGGAGTGAGAGGCCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000074221-'17-16,'17-15,18-16

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.008 C2=0.452

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=97.6)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5)

Main Inclusion Isoform:

ENSMUSP00000073930f5485A