HsaEX6094723 @ hg19

Exon Skipping

Gene

ENSG00000198453 | ZNF568

Description

zinc finger protein 568 [Source:HGNC Symbol;Acc:25392]

Coordinates

chr19:37482078-37488342:+

Coord C1 exon

chr19:37482078-37482201

Coord A exon

chr19:37482653-37482748

Coord C2 exon

chr19:37487219-37488342

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTCCCTTTGTTTTTGAGCAGGGC

3' ss Score

7.55

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GGCTTGAAGTTCAAAGATGTGGTCATTTACTTCTCTCAAAAGGAGTGGGAATGCTTGCACTCTGCTCAGAAGGATTTGTACCGAGATGTAATGTTGGAAAATTACGGCAACCTGGTCTTACTGG

Seq A exon

GGCTTTCTGATACTAAGCCAAATGTGATCTCCTTATTGGAGCAGAAGAAAGAGCCCTGGATGGTTAAGAGGAAGGAGACAAAAGAATGGTGTCCAG

Seq C2 exon

ATTGGGAGTTTGGAAGAGAAACCAAGAATTTATCTCCAAAGGAAAACATTTATGAAATTAGATCACCACAACAGGAGAAGGCCAGAGTTATCAGAGAAATCAGATGCCAGGTGGAGAGACAACAGGGTCATCAGGAGGGACATTTCAGACCAGCTGTAATACCATTTACTTCCATGCAGTGCACAGCCCATAGAGAATATCAGTGGCTTCATACTGGAGAGAAATCCTGTGAATGCAGGAAATGTAAGAATGCTTTTAGGTACCAGTCATGTCCTATTCAACATGAAATAATTCATAATAAGGAAAAAGAACCTGAATGTGGAGAATGTAGGAAAATCTTTAATAGTGGATCAGACTTGATTAAGCATCAGACGCTTCATGAAAGCAAAAAACATAGTGAAAATAACAAATGTGCCTTTAATCATGATTCTGGAATTACTCAACCTCAGAGCATTAATACTGGAGAGAAACCTCATAAATGTAAGGAATGTGGGAAAGCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198453-'17-16,'17-15,18-16=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.141

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=97.6)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.1),PF139121=zf-C2H2_6=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.8)

Main Inclusion Isoform:

ENSP00000389794