HsaEX6094723 @ hg38

Exon Skipping

Gene

ENSG00000198453 | ZNF568

Description

zinc finger protein 568 [Source:HGNC Symbol;Acc:HGNC:25392]

Coordinates

chr19:36974420-36998700:+

Coord C1 exon

chr19:36974420-36974466

Coord A exon

chr19:36991751-36991846

Coord C2 exon

chr19:36996317-36998700

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTCCCTTTGTTTTTGAGCAGGGC

3' ss Score

7.55

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

AACCCAGAAGAGGAGAGAACTGCTGTGCGTCTGAAGTGATGGCGGAG

Seq A exon

GGCTTTCTGATACTAAGCCAAATGTGATCTCCTTATTGGAGCAGAAGAAAGAGCCCTGGATGGTTAAGAGGAAGGAGACAAAAGAATGGTGTCCAG

Seq C2 exon

ATTGGGAGTTTGGAAGAGAAACCAAGAATTTATCTCCAAAGGAAAACATTTATGAAATTAGATCACCACAACAGGAGAAGGCCAGAGTTATCAGAGAAATCAGATGCCAGGTGGAGAGACAACAGGGTCATCAGGAGGGACATTTCAGACCAGCTGTAATACCATTTACTTCCATGCAGTGCACAGCCCATAGAGAATATCAGTGGCTTCATACTGGAGAGAAATCCTGTGAATGCAGGAAATGTAAGAATGCTTTTAGGTACCAGTCATGTCCTATTCAACATGAAATAATTCATAATAAGGAAAAAGAACCTGAATGTGGAGAATGTAGGAAAATCTTTAATAGTGGATCAGACTTGATTAAGCATCAGACGCTTCATGAAAGCAAAAAACATAGTGAAAATAACAAATGTGCCTTTAATCATGATTCTGGAATTACTCAACCTCAGAGCATTAATACTGGAGAGAAACCTCATAAATGTAAGGAATGTGGGAAAGCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198453_MULTIEX2-3/3=C1-C2

Average complexity

C2

Mappability confidence:

80%=80=100%

Protein Impact

Alternative protein isoforms (No Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.019 A=0.000 C2=0.146

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF139121=zf-C2H2_6=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.8)

Main Inclusion Isoform:

ENSP00000407153