MmuEX6007667 @ mm9

Exon Skipping

Gene

ENSMUSG00000030228 | Pik3c2g

Description

phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide [Source:MGI Symbol;Acc:MGI:1203730]

Coordinates

chr6:139570409-139578396:+

Coord C1 exon

chr6:139570409-139571086

Coord A exon

chr6:139575017-139575099

Coord C2 exon

chr6:139578239-139578396

Length

83 bp

Sequences

Splice sites

3' ss Seq

TTAGCAATTTTTACTTCCAGCCG

3' ss Score

5.66

5' ss Seq

AAAGTGAGT

5' ss Score

8.4

Exon sequences

Seq C1 exon

AAGACACGTATTTTGTGCCAGATGCACCAAACTTGGGTTCAAAATGGCCATCCATATATGAAACACACCCAAGATACTTCAGTGAATTCACTTCTCAGAGCCCTGACTCCTCCCAGCTTCGGTTTGGAAAACTATCAGCCATTGGTTTTAATCCTGCTGTACTACCAACCCATCAGCTCATTCATGAGGGAGCTTCCTGGAGAAATCCCAGTGGAAAATATCATGGCATCGAGTATCCCAGATTCGATGCTCTACCTCCATCATCCACTGGCCAGGGTGAGTGTAATCCACAAGGACAATCAGGAACCAAACATCATAACTACTGTGGAGAACATGAAGGCAATCTCCCCCATCATCATTCATCCTACTCAATAGACTCCATACCGAATAGAGAGAAAAGAAGGAGTGGAGATGTGAACCTTGTAGAACCTTCTCTGGAGTTCTCTAAAGACTCCTTTCTACCCAGGACATCGGAGAACGTGTCAGTGGAAAGCACAGAG

Seq A exon

CCGATTGGTTGTCCCATTGAAATAGTTGAGGTACCCCAAGGGAGTAACAAGAACCTGGCCTCCTTTTGTAACAAAGTAAAAAA

Seq C2 exon

GATAAGAGAATCGTACCATGCAAGTGACATTAATTCCAATTCTGGGAAGATCTGGGCCATCACCACAGCCTATCCATCTCGGCTCTTCGCTGACACCAAATTCAGAGTAAAAATTTCTATTGATAACTCAGCCCAACTCCTCCTTCTTATGCCACACG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000030228-'0-1,'0-0,1-1=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features