MmuEX6008405 @ mm9

Exon Skipping

Gene

ENSMUSG00000004500 | Zfp324

Description

zinc finger protein 324 [Source:MGI Symbol;Acc:MGI:2444641]

Coordinates

chr7:13554144-13559171:+

Coord C1 exon

chr7:13554144-13554270

Coord A exon

chr7:13554713-13554829

Coord C2 exon

chr7:13555563-13559171

Length

117 bp

Sequences

Splice sites

3' ss Seq

TGCTCCTTATTCCTTCCTAGGAC

3' ss Score

9.72

5' ss Seq

TTGGTGAGT

5' ss Score

9.27

Exon sequences

Seq C1 exon

AGATGGATGGCCTTTGAGGACGTGGCTGTGTACTTCTCCCAGGAGGAGTGGATGTTCCTGAATGCCGCCCAGAGGGCCTTGTACCGCCATGTAATGCTGGAAAACTTCGCACTTGTAGACTCCATAG

Seq A exon

GACCTTCTGTCTCCCGGCCTCGTGTGATCATCCAACTCCAGCGTGGTGAGGAACCCTGGGTTCCCAACAGGACAAATAGAGGCCCAGGCAGGGGTGCCCACAGGAGATCCAGCCTTG

Seq C2 exon

GATCCAATTATAGTACAAGAGAAAGACATGTGTCTAGAACACCTCCAGGGGCCACCTGTGACAGGCCTGATAGGATACCTACTAGTATCCTTCCTCCTGCTGGTGCCTACCCTGATGCAAAAATTCTGGAGGGACACCAAAGTGCCTGCCCATCTCTACAGAAAAAACCCACAGGGGTATCAGTGATTTACTGGGAGCAACTCCTGCTAGGTTCCAGCAGCAGTGAAGCAACTGTCAGCTTGCGATTGACTTCTCCAGTAGGGGTTCCTGAAAATGGTTCATCTAGAGGGAAGGCCTTCTCTGACTTTCTGGCCCCAGGGAAGCAGCCACGGGTAGCAGAGCAGCGAAAGCCAGAGATGCAGCTAACCCCTGGGAGAACTTTCCAAAGCATTCCAGATCTCCATGGGGCAGAGGAGGGACGTGGGATGAGTGAGGCTTGGCATGAGTCTCAGGGAGACCCCAATGTTACAGAGGCCCGGATATGGGATGAGCTGGGAGAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000004500-'2-3,'2-1,4-3=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.708 C2=0.407

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF127602=Zn_Tnp_IS1595=WD(100=11.2),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5)

Main Inclusion Isoform:

ENSMUSP00000041944