MmuEX6023464 @ mm10
Exon Skipping
Gene
ENSMUSG00000026131 | Dst
Description
dystonin [Source:MGI Symbol;Acc:MGI:104627]
Coordinates
chr1:34186819-34197353:+
Coord C1 exon
chr1:34186819-34186951
Coord A exon
chr1:34187972-34193263
Coord C2 exon
chr1:34197201-34197353
Length
5292 bp
Sequences
Splice sites
3' ss Seq
TTTCTGCATTTCCCTTTCAGCCG
3' ss Score
9.95
5' ss Seq
AAAGTGAGT
5' ss Score
8.4
Exon sequences
Seq C1 exon
ACTGACAGAGGAAGAAAGAAGTGACTTGGAGAAACAGGTGAAAACCCTGCAGGAGGGCTACAATTTATTATTCAGTGAATCTCTGAAACAACAAGAATTACAACCCTCAGGAGAGTCGAAGGTCCCGGAGAAG
Seq A exon
CCGGATAAAGTGATTGCAGGCACCATCAATCAGACCACTGGAGAGGTCCTGTCTGTCTTTCAGGCAGTTTTAAGAGGCCTTATTGACTATGAAACGGGGATCAGGTTGCTTGAGGCACAGCTAGTGATTACTGGTTTAATTTCACCAGAGTTAAGAAAGTGTTTTGACCTCAGAGATGCTGAAAGCCACGGCCTCATTGATGAACAAGTTCTGCGCCAACTAAAAGAACTAAATCGAGCAAAGCAGCTCATTTCTACTGCATCGCCGACCTCGATCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGTCCGCGGGCCCCCTGCTTGTTCCAGCCACAGGTGAACACCTGACCTTACAACAGGCTTTCCAACAGAACTTGATTTCCTCCGCCTTGTTTTCCAAAGTCCTAGAAAGGCAAGACACTTGCAAAGATCTTATTGACCCGTGCACTTCTGAGAAGGTATCTTTAACTGATATGGTACAAAGGAGTATTTTGCAGGAAAATACCAGGATGTGGCTTTTACCAGTGAGACCGCAGGAAGCTGGCAGAATAACACTGAAGTGTGGAAGAAGCGTTAGCATCCTGAGAGCAGCTCACGAGGGACTCATAGACCGAGAAACCATGTTTAGGCTGTTAGGGGCACAGCTTCTGTCTGGTGGTCTCATCGATTGCAACTCCGGTCAGAAAATGACTGTTGAAGAAGCTGTGGCAGAAGGGGTGATTGACAGAGACACCGCAAGCAGCATCCTCACTTACCAGGTTCAGACGGGTGGAATCGTGCACTCGAACCCTGCTAAGCGACTGACTGTGGACGAAGCAGTACAGTGTGAGTTGATAACTTCCAGCAGCGCGCTGCTGGTTCTGGAGGCTCAGCGGGGCTACGTTGGACTCATCTGGCCCCACTCTGGTGAAATATTTCCCACATCATCTTCCTTACAGCAAGAGTTGATTACAAATGAATTAGCCTCCAAAATTCTGAATGGGAGACAGAAAATCGCTGCTCTCTACATCCCGGAAAGCTCTCAGGTCATTGGTCTGGATGCCGCTAAGCAGCTGGGGATCATAGATAACAACACAGCATCGGTTTTAAAAAGCGTAACGCTGCCAGACAAAATGCCTGATTTAGGAGATTTGGAAGATTGTAAAAATGCCAAGAGGTGGCTCTCTTTTTGTAAACTCCAGCCATCCACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCTGATGGCGAAGAGCCAGTCACAGCTCAGAGCTCAGAACAAACTAAAAAGTTATTCCTATCCTATTTAATGGTGAACAGCTACATGGATGCACACACCGGCCAGAGGCTTCTGCTCTATGACGGAGACTTGGATGAGGCCGTGGGCATGCTTCTGGAAAGCTGCGGCACAGAACTCGGAGCTGACACGTCCACAAGAGAAAGCCTGTCTGTCCTCACCATCCCTGATGCCTTTCCTGACTGTGCTTTGAGTGAAGAAAAGCACGAGTGTTCGGCTGCAGCAGCTGGGCCTGATAAATGTCATTACAGTCACCCCGGACATAAAGAGTCTCTTGAAAACGCAAAGTGGGACATGAATGAAGCGTTTTGTAAAATGGGAAACAATGATAGCAATGGTGAGTTGCCGCGGCCAGAAAACCTAGCAGATACAACAGTTGTTCAGAAAGGCTCAGAAAGTCCATCTAGAGTGCGTGTCCCCAAACCTACGTCATCTTCAACACAGCCTGAAGGGAGCGTACTCAGACCTGAGTCTGGTAGCATACTTAAAGGCTGTAAAAGTCAAAGTGAGCCTGTTACAAAAAAGTATCCAGATGGAGCTAACCATTCTCATTTTTTGACATCAGAAACCAGTAGACCTTGTGATTCGAATGAAAGAGAGGATGAAGAGAATATACAGAAGGGCCCCTCTGTCTTTGACTATTCCCCCCGGCTGAGTGCCCTGTTAAGCCACGATGAGTTGAGGCAGAGTCAGGGGCGTTTTAGTGATACAAGTACCCCACAGAACACAGGATATTTATGCGAAGCCTCTACTTTGTCACCCAGTGACCAGAGAGTGTTGGCTGATCAGAGCACAAGAGAAAAGTTTCAAGACCAGTTCCTAGGAATCGCAGCTATCAGCGTCAGCCTCCAGGGGGCGCCCTGTGGACAGAAGCCTGTAGATACTGAGTGTAGCAGTTCTCAAGTACACTATCACAGTGAGGAATCCATGTCAGATGCTTCTGCTGAGAGTGGAGCCACTCGGCAGACAGATGAGTCAGAGAAAACTGGGTCTAAGGTGGAAGACAACTCCTGTACCATGGTCCCTGGGGGTGGTTCCCGCAATGACAACACATCAGATTGTGGCCCACTGTCACATAAAGGAGCCATTGATGCTGGTGACTATGAGACGTCACTGCTGGCCGGCCAGCAGAGCGACACGGCAACAGACAGTGACAGTGATGACTATTTCTATGACACCCCCTTGTTTGAAGATGAGGACCATGACTCTCTAATCCTTCAAGGTGACGACCGTGACTGTTTGCAACCCGAGGACTATGACACCTCCTTGCAGGAGGAAAATGACAGGACCCCTCCTCCTGATGACATTTTTTATGATGTTATGAAAGAGAAGGAAAATCCCGAGTTTCCTCATGGAGGAATGGATGAGAGCTTAGGTGTGGAGAACAAAGTATGTTGCCCTCAGGGCTTTCCTGTAGGTATTGAGAAACCTGAGTTGTACTTAGCTGGCGAGAAAGAGTTTAATTCTGGTGGCTCAGAACAGTTAGTGGAGTCTGTGTCTGAAAGTGAGAACCCGCCTGGCCTTTGGGATAGTGAGTCTGACTCGTTGACTGAGGGTGAGATTATAGGAAGGAAAGAGAGGTTAGGAGCTTCGTTAACACCTGATGGTCATTGGAGAGGGGACAGAGAAGAGTGTGACACCAGCCGAGAAAGCCAGTCTGATACCGATGGGGTAGGCTCCATACAAAGTAGCGAAAGCTACAGGCCTTATATGAGCGATGGTAGCGACTTGGATGAGGAAGACAACGGGGGCCGCAGCAGTGAGGACAGTGGAGACGGGCGAGGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTATCAGGAAAGAACACGGGGGTGAAACCCAAAATGTCAGTGACATGATCCCCCTGGACAAAACGCACAGTTATAGTCCGTTAGAAACGCAGCATGGTGCAGGTGTTTTCCAGCCAGAGTCAGCTGGTAGGGGAGGTTGGGACACAGAAAGAAGCAGCCATCCAGAACTTACCACTGAAGCTGATGAGGAAGACGAAGCAAGTCTGTCCACTCACATGGCAACTAAAGGTGTGTCGCTGTCTAATGCCGAAGGCACTGCCTCAGAAGAAATCAGGTTGGTTCAAGGGCCAGACTCTACAGGCATTCTAAAAGCTGAAGACCTCGAGAATGTATCGCCAGAAATCAGCCCATCTTCTGACAACATTGTCCGTTCTGAAGCTGAGTTAGGAGGAGGAGCTTCTGAGGATGGCCATTTGTCATTTACAGGAAGTGACAGGGATCAGCAGGGACCTGGAAGAGGTCTGGTTAAAGGTAGAGATGGCCAAAGCGATAAGCTGGTAGATGAGACGTCCATTCGGGAAATGGGCTTTCAGAAAGAAGGGGTGTTGATGAGCAGCCCAGAGGAAGGAGGAGAAGAAGAAAGGGATCTCGAACCCTTCCCGAATGGAAGTGCGACAGAGAGCCTCAACATGGGTAAGAGTCAGGTTCCCCCTCTACTGACACACACCGAGGAACTTAGCCACAGAGGGGCTCCGCACACAACAACCATGACAACAACCATGACTCTTGAAGGTGAAGCGAAGAATGTGCAAACGGGGCTTACGGAAAGTCCTGTCCTGCTTGAGACTCTTGCAGAAATATTTGACACCCCAGCTTCTAAAGTGACTCGTGCTGACTTGACTTCAGCTGTAACAGCCTCTGAGATGAAGAGCCAAGTGAAAGAAGACTCCCTCACTGGAGGACCAGAGAAAGAGACTGGTCCGTGTACTTCTTTAGGACATTGTGATAAGTGTATACACGTGGATATGCTGGAACCCAACGAACATACCCCAAGCTGTGCCTTAGTAGCTCCTCCTACCGTGAAAGATAACTTATGCTCTGTAAATAATGCTGGGGAGAAGTCAGTCCGTCCCCAAGAAGACTGGCCTCCAGCTGCCGAGGTCCGGCTAAGTGATGCTTGTGTGGAGGAAAGTATCTCCGAAGGAAAAGCAGGCATTCTCCAGTTCACTCCGGAAAATAGTGACTCCACCCTGTCACGCCTACCTCATCAAAGTGTGGCGGGCTGGGGGAAAAGCGCCGATTCTGTGCAGGCTCGGCTCCCTGTGAGTGGAGTGAGACACACCTCCGCTGACACTTTAGACGTGGGCTGCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAAGCGCTGAGGAGGAGCCACACAGAGAACGCGCCTTGTCTCTGAAGCCCCAAGAAAGAGAACATCATATGCTTGGGTTCGTAGAAGATGGGAGAAGTATCTTGAAAAGCAGTTTAGACAAAGTTCATATGAATCTCCAGGAAGTGGGAGACCCTTCGGCTGGCACAGGGACGAAAATTTCAATTCAGAACTTAATTAGAAGAGCTATCTTGTCTGAGTTGCCAAATGAAGTTTCGAATGTGCCCAGTCATGGCATTTCCCCCATTAGTAACTCATCAGAAGTAAGGGCAGAGAGTGGAGGTGACCCTTTCTGTATTACAAGTTTTCTTCATCTATTGAAGCAAAACCAACCTCCCCAAGAAACTCCAGGCATCTCTGAGTTAGCTAAAGTATTAACCCAGATGGACTGTGATCCAGAGCAAAGAGGCCTTGGGTCTGAATTACTTCCACCACAACTTAAAAATGCCTTTTACAAGCTGCTGTTTGATGGGTATGCAACTGAAAAAGACCAGGCCGAAGCTTTGGGGCAAACATCATGTGCTGTTCCCAAGATGGCAGAAGAAAAGCCACACGTCTGCAGTGACCTCAGAAACAAAGAAGGACATCACTGTCCCCTGAACCCACAAGCTGTAGGAGAAGCCGAGGTAGAACCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTCGGAGAACTTTGCAGCGAGCCCCCAGAGCATTCAGAAAGTACATCTGGATCAAAAGAAAGGTCTTCTGACAGTAGCTCGAAGGAAAAA
Seq C2 exon
GTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGATTGGAGACGGCACGGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000026131-'87-81,'87-72,90-81=AN
Average complexity
A_C2
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.446 A=0.623 C2=0.120
Domain overlap (PFAM):
C1:
NO
A:
PF0068115=Plectin=WD(100=1.8),PF0068115=Plectin=WD(100=2.5),PF0068115=Plectin=WD(100=2.6),PF0068115=Plectin=WD(100=2.6),PF0068115=Plectin=WD(100=2.5),PF0068115=Plectin=WD(100=2.6)
C2:
NO
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types