MmuEX6064152 @ mm9

Exon Skipping

Gene

ENSMUSG00000063108 | Zfp26

Description

zinc finger protein 26 [Source:MGI Symbol;Acc:MGI:99173]

Coordinates

chr9:20237416-20244719:-

Coord C1 exon

chr9:20244636-20244719

Coord A exon

chr9:20243966-20244048

Coord C2 exon

chr9:20237416-20243104

Length

83 bp

Sequences

Splice sites

3' ss Seq

GTTTGTTTGTTTCACTTTAGAAT

3' ss Score

9.03

5' ss Seq

CTGGTAAGT

5' ss Score

10.65

Exon sequences

Seq C1 exon

GAGGTCAGATGTTTAAACCCAGCCTGATCTCTTGGTTGGAGAAGAAAGTAGAGTTGACAGTAATAGAGCAAGGAATTCTCCAAG

Seq A exon

AATGGGAAATGCACCTTAAGACAAAAAGGACAGCACTTCAGCAGGATAGATTTTGGTCAGATATGTCAAATGGGATGCAACTG

Seq C2 exon

GGAAGAGAGCACAGTGGAGGGGAACCTGGTGACCCTGTTCAAGTTGGAGCAGTTTTTAGTGAAGATTCATGCCCTCAAACTCACAGTAGTACTTCAAATACAGGGAACACTTTTGCGTGTAACTTAGATGGAAAAGACTTTCAGCCACTCCTTAAAGAAACTTCTACTGAAGAGAACATTGTCCAGTTGAACCAGTGTGTAAAACCTTTGATTTTCACTCCAGATGTTTCCCAGAAAAAGTGCACTCCGGAAAAATCTGTTGAATGCAGTGACTGTGGGGAAACTTTCGTTAATCAGCTAGAACTTCAGACACATAGTTCTTCTCATCGTGAAAAGAATATCCACAAATCAGAGGAGTGTGGACAAGCTTCTACTCATCCTATAAGCCATGGTGGGCATGTGATTCCCACTGAAAAAAAATACTATGAATGTAAGAAATGTGAAAAATTTTTTACACATCCTGTGTACCTTAATATCCATATGCAAAGCCACACTGTGGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000063108-'14-16,'14-15,15-16=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.119 C2=0.094

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0),PF138701=DUF4201=FE(48.3=100),PF0059814=Flu_M1=FE(36.8=100)

A:

PF138701=DUF4201=PD(24.1=50.0),PF0059814=Flu_M1=FE(35.5=100)

C2:

PF139121=zf-C2H2_6=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF0013017=C1_1=WD(100=8.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4)

Main Inclusion Isoform:

ENSMUSP00000124075