RnoEX6034715 @ rn6

Exon Skipping

Gene

ENSRNOG00000025937 | Zfp26

Description

zinc finger protein 26 [Source:RGD Symbol;Acc:1565847]

Coordinates

chr8:21448618-21453190:-

Coord C1 exon

chr8:21453103-21453190

Coord A exon

chr8:21452293-21452375

Coord C2 exon

chr8:21448618-21451449

Length

83 bp

Sequences

Splice sites

3' ss Seq

GTTTGTTTGTTTTACTTTAGAAT

3' ss Score

8.67

5' ss Seq

CTGGTAAGT

5' ss Score

10.65

Exon sequences

Seq C1 exon

CTAGGAGGTCAGCTATTTAAACCCAGCCTGATCTCTTGGTTGGAGCGGAAAGTAGAGTTGACAGTAATGGAGCAAGGAATTCTCCAAG

Seq A exon

AATGGGAAATGCACCTTAAGACAAAAAGGACAGCACTTCAGCAGGATAGATTTTGGTCAGATATGTCAAATGGGATGCAACTG

Seq C2 exon

GGAAGAGAACTCAGTGGAGGGGAGCTGGGTGACTCTATTCAAGTTGGAACGGTTTTTAGTGAAGATTCATGCCCTCAGACTTACATTAGTACTCCAAGTACAGAGGACACTTCAGCATGTCATTTACGTGGAAAAGATTTTCTGCCACCCCTTAAAGAAACTTCTACTGAAGAGAACATTCTTCAGTTGAACCAGTGTGTAAAACCTTTGACTTTGACACCAGATGTATCCCAGAGAATGTGCACTCTGGAAAAATCAGTTGAATGCAGTGACTGTGGGAAAACTTTTGTTAATGAGTTAGAACTTCAGGCACATAGTTCTTCTCATAGTGAAAACAATCTCCACAAACCAGAGGAGTGTGGACAAGCTTTTACTCATCCTGTAAGCCATGATGGGCATGTAATTCCCACTGAAAAAAAATACTATGAATGTAAGAAATGTGAAAAGTTTTTTACACATCCTGTGTACCTTAATATCCATGTGCAAAGCCACACTGTGGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000025937-'9-12,'9-11,10-12=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.050

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF139121=zf-C2H2_6=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4)

Main Inclusion Isoform:

ENSRNOP00000037843