MmuEX6075622 @ mm9

Exon Skipping

Gene

ENSMUSG00000035435 | Abca17

Description

ATP-binding cassette, sub-family A (ABC1), member 17 [Source:MGI Symbol;Acc:MGI:3625331]

Coordinates

chr17:24425941-24428804:-

Coord C1 exon

chr17:24428498-24428804

Coord A exon

chr17:24426281-24426554

Coord C2 exon

chr17:24425941-24426145

Length

274 bp

Sequences

Splice sites

3' ss Seq

TGCCTTTGGCTTCCTCCCAGGTT

3' ss Score

8.55

5' ss Seq

CCAGTGCGT

5' ss Score

5.65

Exon sequences

Seq C1 exon

TTCTGTCTTCTCTGCCAACAATTCTACGCCATGCTCTTGAAAAAGATCACGTATTCTCGGCGCAACTGGATGCTGGTGCTCTCGGTGCAGGTTCTGCTGCCGCTGGCGATCATTATGTTAAGCCTCACCTTTTTTAACTTCAAATTAAGGAAACTGGATAACGTGCCACTGGAGCTGACTTTACAAACGTACGGCCAGACCATTGTTCCATTTTTTATTGCCGAGAATTCTCACCTGGACCCTCAACTTTCAGATGACTTTGTAAAAATGCTTGTGGCCGCAGGGCAGGTTCCTTTGCGTATTCAAG

Seq A exon

GTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAGGAGGCTCCTGAGGGCTTTGATAAGCTCTACGTGGTGGCAGCTTCTTTTGAAGATGTGAATAACCACACGACAGTGAAGGCGCTGTTCAACAACCAGGCCTACCACTCCCCTAGCCTGGCTCTGACTCTGGTGGACAATCTTCTCTTCAAGTTGCTTTCTGGAGCCAATGCTTCCATTACCACAACCAACTATCCTCAGCCTCAGACAGCCATCGAGGTCTCAGAGTCAATCCTGTACCA

Seq C2 exon

GGGCCCTAAAGGACACTACCTTGTTGTCAACTTTCTTTTTGGAATAGCTTTCCTGTCAAGCTCCTTCTCCATCTTGACAGTCGGAGAGAAGAGCGTTAAGTCTAAGAGCCTCCAGTTTGTGAGTGGAGTCAGCACGGCTGTGTTCTGGCTCTCAGCTCTGCTGTGGGACCTCATCTCTTTCCTCGTTCCCACTCTGCTGCTGGTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000035435-'20-22,'20-21,21-22=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features