Special

ENSMUSG00000035435 @ mm9

Biotype
protein_coding
Gene Symbol
Abca17
Description
ATP-binding cassette, sub-family A (ABC1), member 17 [Source:MGI Symbol;Acc:MGI:3625331]
Coordinates
chr17:24401204-24487974:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
29.31
87.07
0
Alternative 3'ss
21
chr17:24437371-24437391
-
70.69
87.07
0
Exon Skipping
121
chr17:24474655-24474775
-
12.22
34.28
0
Exon Skipping
191
chr17:24402368-24402558
-
77.96
95.22
0
Exon Skipping
188
chr17:24404495-24404682
-
74.95
66.67
0
Exon Skipping
163
chr17:24432030-24432192
-
88.46
61.54
0
Exon Skipping
117
chr17:24464584-24464700
-
86.69
52.46
0
Exon Skipping
126
chr17:24454059-24454184
-
92.07
39.29
0
Exon Skipping
274
chr17:24426281-24426554
-
84.59
100
0
Intron Retention
6999
chr17:24437392-24444390
-
19.38
66.04
0
Intron Retention
916
chr17:24454185-24455100
-
14.54
27.22
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Rat rn6 ENSRNOG00000039656 Abca17 1-to-1
Chicken galGal4 ENSGALG00000001967 ABCA3 5-to-1
Chicken galGal3 ENSGALG00000001967 E1BVQ5_CHICK 5-to-1
Zebrafish danRer10 ENSDARG00000100524 abca3b 5-to-1
Fruitfly dm6 FBgn0031170 CG1718 5-to-5
Fruitfly dm6 FBgn0034493 CG8908 5-to-5
Fruitfly dm6 FBgn0036747 CG6052 5-to-5
Fruitfly dm6 FBgn0051213 CG31213 5-to-5
Fruitfly dm6 FBgn0261998 CG42816 5-to-5