FBgn0031170 @ dm6
Biotype
protein_coding
Gene Symbol
CG1718
Description
The gene ATP binding cassette subfamily A is referred to in FlyBase by the symbol DmelABCA (CG1718, FBgn0031170). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (3 unique). Gene sequence location is X:21292308..21306665. Its molecular function is described by: ATPase activity; ATP binding; ATPase-coupled transmembrane transporter activity; lipid transporter activity. It is involved in the biological process described with: lipid transport; transmembrane transport. 8 alleles are reported. The phenotypes of these alleles manifest in: NMJ bouton; embryonic/larval neuromuscular junction; egg chamber; nurse cell. The phenotypic classes of alleles include: lethal - all die before end of P-stage; locomotor rhythm defective; viable; behavior defective; neuroanatomy defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed within 00-06 and 12-24 hour embryonic stages, at stages throughout the larval period, during late pupal stages, in stages of adults of both sexes.
Coordinates
chrX:21292308-21306665:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000167972 | ABCA3 | 5-to-1 |
| Human | hg19 | ENSG00000167972 | ABCA3 | 5-to-1 |
| Mouse | mm10 | ENSMUSG00000024130 | Abca3 | 5-to-5 |
| Mouse | mm10 | ENSMUSG00000035435 | Abca17 | 5-to-5 |
| Mouse | mm10 | ENSMUSG00000051900 | Abca16 | 5-to-5 |
| Mouse | mm10 | ENSMUSG00000054746 | Abca15 | 5-to-5 |
| Mouse | mm10 | ENSMUSG00000062017 | Abca14 | 5-to-5 |
| Mouse | mm9 | ENSMUSG00000024130 | Abca3 | 5-to-5 |
| Mouse | mm9 | ENSMUSG00000035435 | Abca17 | 5-to-5 |
| Mouse | mm9 | ENSMUSG00000051900 | Abca16 | 5-to-5 |
| Mouse | mm9 | ENSMUSG00000054746 | Abca15 | 5-to-5 |
| Mouse | mm9 | ENSMUSG00000062017 | Abca14 | 5-to-5 |
| Rat | rn6 | ENSRNOG00000015783 | Abca16 | 6-to-5 |
| Rat | rn6 | ENSRNOG00000027505 | Abca15 | 6-to-5 |
| Rat | rn6 | ENSRNOG00000039656 | Abca17 | 6-to-5 |
| Rat | rn6 | ENSRNOG00000043296 | Abca14 | 6-to-5 |
| Rat | rn6 | ENSRNOG00000050057 | Abca3 | 6-to-5 |
| Cow | bosTau6 | ENSBTAG00000006717 | 5-to-4 | |
| Cow | bosTau6 | ENSBTAG00000014903 | ABCA3 | 5-to-4 |
| Cow | bosTau6 | ENSBTAG00000034643 | 5-to-4 | |
| Cow | bosTau6 | ENSBTAG00000035915 | 5-to-4 | |
| Zebrafish | danRer10 | ENSDARG00000100524 | abca3b | 5-to-1 |