Special

ENSMUSG00000024130 @ mm10

Biotype
protein_coding
Gene Symbol
Abca3
Description
ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]
Coordinates
chr17:24351950-24410201:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
2.35
82.61
0
Alternative 3'ss
118
chr17:24408537-24408654
+
97.17
82.61
0
Exon Skipping
73
chr17:24357919-24357991
+
72.84
72.07
0
Exon Skipping
807
chr17:24361271-24362077
+
1.28
34.69
0
Intron Retention
1819
chr17:24382081-24383899
+
9.57
28.72
0
Intron Retention
1276
chr17:24398609-24399884
+
9.06
30.68
0
Intron Retention
318
chr17:24400090-24400407
+
2.37
70.83
0
Intron Retention
91
chr17:24405154-24405244
+
14.77
100
0
Intron Retention
2118
chr17:24405440-24407557
+
7.47
55.35
0
Intron Retention
363
chr17:24407746-24408108
+
12.13
95.55
0
Intron Retention
106
chr17:24364587-24364692
+
2.55
100
0
Intron Retention
2587
chr17:24402438-24405024
+
12.04
84.23
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000167972 ABCA3 1-to-1
Human hg19 ENSG00000167972 ABCA3 1-to-1
Rat rn6 ENSRNOG00000050057 Abca3 1-to-1
Cow bosTau6 ENSBTAG00000014903 ABCA3 1-to-1
Chicken galGal4 ENSGALG00000001967 ABCA3 5-to-1
Chicken galGal3 ENSGALG00000001967 E1BVQ5_CHICK 5-to-1
Zebrafish danRer10 ENSDARG00000100524 abca3b 5-to-1
Fruitfly dm6 FBgn0031170 CG1718 5-to-5
Fruitfly dm6 FBgn0034493 CG8908 5-to-5
Fruitfly dm6 FBgn0036747 CG6052 5-to-5
Fruitfly dm6 FBgn0051213 CG31213 5-to-5
Fruitfly dm6 FBgn0261998 CG42816 5-to-5