Special

ENSMUSG00000024130 @ mm9

Biotype
protein_coding
Gene Symbol
Abca3
Description
ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]
Coordinates
chr17:24488895-24547146:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
73
chr17:24494864-24494936
+
73.48
70.16
0
Exon Skipping
188
chr17:24544503-24544690
+
96.89
96.97
0
Exon Skipping
171
chr17:24545054-24545224
+
97.21
57.14
0
Exon Skipping
191
chr17:24545482-24545672
+
97.89
29.09
0
Exon Skipping
74
chr17:24545770-24545843
+
83.59
33.13
0
Intron Retention
1819
chr17:24519026-24520844
+
9.62
28.19
0
Intron Retention
1276
chr17:24535554-24536829
+
9.47
30.68
0
Intron Retention
91
chr17:24542099-24542189
+
13.39
100
0
Intron Retention
2118
chr17:24542385-24544502
+
8.11
54.9
0
Intron Retention
363
chr17:24544691-24545053
+
10.89
55.36
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000167972 ABCA3 1-to-1
Human hg19 ENSG00000167972 ABCA3 1-to-1
Rat rn6 ENSRNOG00000050057 Abca3 1-to-1
Cow bosTau6 ENSBTAG00000014903 ABCA3 1-to-1
Chicken galGal4 ENSGALG00000001967 ABCA3 5-to-1
Chicken galGal3 ENSGALG00000001967 E1BVQ5_CHICK 5-to-1
Zebrafish danRer10 ENSDARG00000100524 abca3b 5-to-1
Fruitfly dm6 FBgn0031170 CG1718 5-to-5
Fruitfly dm6 FBgn0034493 CG8908 5-to-5
Fruitfly dm6 FBgn0036747 CG6052 5-to-5
Fruitfly dm6 FBgn0051213 CG31213 5-to-5
Fruitfly dm6 FBgn0261998 CG42816 5-to-5