MmuEX6103066 @ mm9
Exon Skipping
Gene
ENSMUSG00000040479 | Dgkz
Description
diacylglycerol kinase zeta [Source:MGI Symbol;Acc:MGI:1278339]
Coordinates
chr2:91775238-91776722:-
Coord C1 exon
chr2:91776682-91776722
Coord A exon
chr2:91775979-91776118
Coord C2 exon
chr2:91775238-91775269
Length
140 bp
Sequences
Splice sites
3' ss Seq
TCTAACCCCCTCCCCGACAGGAG
3' ss Score
8.01
5' ss Seq
CGGGTGAGT
5' ss Score
9.89
Exon sequences
Seq C1 exon
CCACCACTGCCAGCCGCTTCTACAGGATCGACAGAGCCCAG
Seq A exon
GAGCACCTCAACTATGTGACGGAGATTGCCCAGGACGAGATTTACATCCTAGACCCAGAGCTTCTGGGAGCATCAGCCCGGCCTGACCTCCCCACCCCTACCTCCCCACTCCCTGCTTCCCCCTGCTCCCCTACACCCGG
Seq C2 exon
GTCAATGCAGGGGGACACTGCACTGCCCCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000040479-'36-50,'36-47,38-50=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.489 C2=1.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Human
(hg38)
No conservation detected
Rat
(rn6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs: