GgaEX1019529 @ galGal4
Exon Skipping
Gene
ENSGALG00000008380 | DGKZ
Description
diacylglycerol kinase zeta [Source:RefSeq peptide;Acc:NP_001026363]
Coordinates
chr5:22956523-22957799:-
Coord C1 exon
chr5:22957759-22957799
Coord A exon
chr5:22957085-22957275
Coord C2 exon
chr5:22956523-22956554
Length
191 bp
Sequences
Splice sites
3' ss Seq
GGCTGACTTTTGCATTCCAGGAG
3' ss Score
7.02
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
Exon sequences
Seq C1 exon
CAACCACAGCAGATCGGTTCTACAGGATAGATCGTGCACAG
Seq A exon
GAGCACCTCAACTATGTGACAGAGATCTCTCAGGATGAGCTCTATGTACTGGACCCAGAGCTGGTGATCACCCAGACCGTAGGCACATCTCCTGCCATGCCTGATCTTGTTGACTCATCTGCCACACCTCCTGGGCACCACTTTGCTTTCCCATCCTCTTCTTCCTCTCCACCCTGCTCTCCTGCCCCCAG
Seq C2 exon
TGCTGACGCTGAGCTCTGCCTCCCGCACAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000008380_MULTIEX1-2/2=1-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.547 C2=0.333
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
PF127962=Ank_2=PU(14.3=83.3)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]