MmuINT0097609 @ mm9
Intron Retention
Gene
ENSMUSG00000024593 | Megf10
Description
multiple EGF-like-domains 10 [Source:MGI Symbol;Acc:MGI:2685177]
Coordinates
chr18:57424095-57435481:+
Coord C1 exon
chr18:57424095-57424197
Coord A exon
chr18:57424198-57435334
Coord C2 exon
chr18:57435335-57435481
Length
11137 bp
Sequences
Splice sites
5' ss Seq
CAGGTAGGA
5' ss Score
9.79
3' ss Seq
CCCCGTGTGTGATGTTTCAGGTG
3' ss Score
10.26
Exon sequences
Seq C1 exon
GATGGCACTTATGGGCTGAACTGTGCCGAGCGCTGTGACTGCAGCCATGCAGATGGCTGTCACCCCACTACAGGCCATTGCCGCTGCCTCCCTGGATGGTCAG
Seq A exon
GTAGGAGCTTCGGGCAGTGTTTGAAAGAGATAACCAACACACTTCAGTATCTAATGGTGCTTGCTCCTTTCAAAGAAATGCAGAAAGCTCAGTTTTTCAGAAAAAAATTCAAAATGCAGTAAAGTCCCCAGCAAGGGGACACATTCTTGCCATGAAATGTTAAGTGTTGGGTGTGAATAATCAGTCACCCAGGGTAGTCACGTCTATTGAGCTGGTTGTTCATGAAAGATGTCGTTGCTAAAATGTAGGCCAGCAAGATTTCTCTGATATTTTTTGATTATTTAGAGAAAAGAAAAAAATAAAATAAATCCCCAAACTATAATTAGAATCACTATAGATATAAAGCTATTAACTACTACTAATATAGTTCATATACAAATATTGAATCTCTTTCCTAGAAATTAAAGTTAAAAACTGTATCTTTGTCAAAAATTTGAGTCATGACAAATTCATGGTATGATTGAACACCACTTTCTAATACAGTAGAAACTCCCTCCTTATTTTATGTGGCTTTATGACTTCAGCTAGGAAGTTTATCAGGAGTGTCATGGTACTGGAAGAAAATGATGTTTTTACTCATGATGCACAAGTTTGCTTAGACATTTAGTGCCATCTTCAAAGCCCACAGTAAATCATGAGCAAGAACATCGCTCTTCTTGCAGGACTACTTTGCATTTCCACCAGCAATATCTGAGCATCCCCACATCCCCACCAACGCATCTGTCTTGCTGGTGACATCCATCTCCATGGGTGTGAAGTGGTACCTCTCTGAGGTTTTGTTCTGTGCTCCTCTGGCTCCATCCTGTGCATTTATTGGCCACCTATAACCATTCTCCGTAGAAATATCTAGTTAAAGCTGTCATTAATTTTTTAACTGAGCTATTTTTCTTTGTGTCATTGAGTTCTAAGACCACATAATATAAATGTTTACCAGACATGATTTGCAAACATTTCATTGTATTTTCTGGTTTTTTTTTCCTTTGTTATTTTTCACAGTGTCATTTGAAGCAGAAGTTTCTATTCTTATAGTCTACTTTGTTTAATTTTAAAATGCTGTTCCCTTGTGCTCTTTGGTATCGATTCTAAGGAATCAAGCCGGAGAGATGGCTCATTAGTTAAGAGCACTAGCTGCTCTTCCAAAGGTCCTGAGCTCAAGCCCCAGAGAGCACATGGTGGCTCACAATCATCTATAATGGTTATCTGTATAAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATCTTTTAAAAAAAGGTATCATTGTTTAATACAAGATCACAGAGATTTATTTTTGTGTTATCCTCTAAAGTTTTATCTACATCTGTATCTATATCTATTTAATCTATATCTATCTTTTTATACTTAGGTCTTTGGTTCACTTTGGGTTAATCTTTTACATAGTATGATTAGGGAGGCAAACTTTATTCTGTAACCAGTGATCCCAGAAAAGTTTTTTGAAGACTATTCTATCCCCCTATTGAATGTTTTAACTTATTCCTTGCCGGAAGTCAATTTCCCATAGACGTGAAGCTGATTTCTGGATGTTCTATTCAATCCCATCAGTCTGTATGTTTGTTCTCATACTAGTAAAATTCTCCCTTGATTGCAGTAGCTTTGTGGGAGGTTTTAACTTGGGAGAAGTGTGGACATTCCAACCTTGCTCCCATTTTATGGTTGGCTCAGTCCAACCCTGAAACGCTGGAGCCCTTGAATTTCCACATGGGTTTTAGCTTTAATACATTAATCTCTAAAAATAAGCAAGATGGAAACTTAATGGGGTTTAGCTGATAGATTAATTTGGGGATGTACTAGGAATTCAGCCACATTGAATCTTCACATTAACAAGCATGACCTGTCACCAGCAACCCCTTCAAGGGGACCTTTAGCCCTTCTAGAATTTGCTGAGCCCTTCTTCGGTTATGGAAAGGCAGAAGAAAGCAGTGATGAGCTGTCATGAGTCAGTGTCATGTGTTAGTGTCATGTGTCAGTGCTACCTTATCAGATAGGGTTAGCTTGTACAATGACTTCCTCTGCCATCAGTAGGAGTGACTCATGGACTCAAGGCCTCTATCCCTGTTGTTCCTTCTTGCCTTGTGAACTTGGCTTTATAGTACGAAAGTCCACCTTTCTATGTCCCTTATCACTGACCTTGAAGCTGGCCTTAAATAACATCTGTGATTTCACTAGAGCTTTTGAGTTTTGCAAAATGGACAGACCAGTATTTCATTCTCAGTGACTTTAGTGTGAAAAATAGCACTAATTATCCGGTAAATTCAGAGTGATTCTAACGGAGAGGCCACATTACTTGATTTGGGTCCTACTCTACTAAATCTACTTTTGTCTTATAAATACATAGAGAATTGGAGGTATCCTTGAACATACCGGTCAGAACTCAAGTGTCAACCTGCTCTGATGATTTAAAGCCAGGTTATAAAAGGCATACCCTAGTATACAAGAGGAAAACAAGAGATGAGCTGGCTTAAAGCCAGTCAGAAAATGTGTTCCTGGCATTCCACAGTCTGGGTCATGGGGTAAGACAAATTATCCCCCATCTGGCCTTAGACCTATCAGGCTCCTGTGGGAATGCACTGGCTTTGCCACACAATGTGGTCGTATAATCCTCTCCCCATCTGTGACCAGCCTGCTTCCTGTCTCATGTCATGGATATCTCTCTCTCTCTCTCTCTGTCTGTCTCTTTGCTCTGTAGCTTGTACTTATGTCTCTAATTTTGCTCTCAAGCCAGCCCAGTGGTCCTAGTGACTCATTTCTCTGGGTCTTTTCCATGGGCCTGGGTTTATAAGTAGCTGTCAGTCATTGAGCCTGCTAAAAGGTTATTCCCCACACTCATAGTGCTCACTTGGTACAAGCAAACATATGTGTGTGTGCATGGGGGTACAGCTTCAGAAAGTTTAAACATATGTGTGTGTGCATGGGGGTACAGCTTCAGAAAGTTTAAAACCACATCACAATCGGAATGAGAGTTGGGTTTTTTTTTTTCTAAACAGAAAGAAGAGTTTCTGTATAATATTTACACAGGACATCATTTTGTTGTCGGCCATGACTAGACTCATCTTCTTTTTCTTTTCACTGATAACTTTGTTTTGACTAAGTTCCTTGTTAAGATTCTTTTTACAACAGGAAGGAAGCTCCCCCCCCCCCCCCAGGGGCCAGGTTTAAGCCCAGGAAGGCACAGGAATCAGTCTACTCTTTTCTTTGTTGCTGAGCTTGTTCTAAGTGCCATGCGAGGGATGGCTTGCTGGAGAGGGTCCAGCCTGATGTAATGGGGAGGCGTCCTGCACCTCAGTGAACTGCAATCCAGGGCTTAGGCTCTTCCCCCTGACTGAGGAAATAAAAATGGAACTAAGTGTTCAGCCAGTGAGGACCCCGGCAGGGTTGGCCATGAAGGGGAGATTGGAAGCAGAGGGGAGGACATTAGTATACGTAGACTGCAGAGCGATCACCTCCTCTTCAAAGGAAGTCTGATTTCTTAGCCTGGAGTCATCACCACCCAAAACTTTGCAGTGTTTTCTCAGGTTTGTATCTTCTTAAAGGAACTGAGATTTTAATAACAGGAAGATCATCAGTCATTCTTATTTTATTTTTATTTTTTATTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAGCTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATTCACCTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCAGCTCATCTGTCGTTGTTATTAGGGGAATGAGGGCCTTGTCAGCTCAAATGGCATAACTTCATTGAAATTATATATGTATAATATTATATATAAATATATTAGCATATATTTATATGTGTAATATATAATAAGTTGATATAAGTTATATGTGTGTATACATAATAATTATTAAATAAAGAAGAGCCTACAAATTTAAAAGGGAGCAAGCAAGGATGGATATAAGGTGGGGTTTGAGAGAGGGAAGGGAAGGAGGAGAAATGACATAATTATATACAATTTCAAATATTCTTTTATATGAAGGAAAATAGATCTACATGTTAGCATGTTTTAGCAAGGTAAAACTGTGAATGTTAACAGAAACTCATTAATATTCTAACTTCTCTTTCTCGAATTAATGCACCACTTTTACAAAGAAAGGAAGTGCCGTTTACCATGCGTAGATATTTAAAACCTCAGTTTGTTGACAATTTGAGTGAATAAATCGTTTTATTGGAAAGAAAGAGACCTCGTTGGAAAGCTGAGGAGATGAAATGCCGCTGGAACTGGAATACACATATTAACTCTTTCGAATCTGAGGGGCACGTGTTACTGTGATCAAGGATATGGAGGCTGTCTTAGGCTTTGTACACAGCAGTATACACACTGCACACACATACACACGTGCACTCACATACTGTATCTGGTGTGTGCAAACACATCCCACACGGTTATAAACTGAAACTAGCTTTTCAGAAATGATTGAGCAATTCCAGATGAGATATAACTAGATAGACAGATTTTCACAGATAGATGTACGTGGGTATGCAGTTTTCAAGAGTAGTAGTGGAGTGACAGGCTTTATGAAGTTTTTCTTAAAAATAAAAAACAAAAAACAAAAAAACGGTAGAAACAGGTTGATGTTTCTTCCTGTCTGCTCTGGGCTCAGCCATCCAGGAACACCTACTCACTGAGCATTATAGCTAATCACCGTTTAATTCCAGCTGTCTGAAAACATGTGCGATCTGTGGCCTGGCTCCCAGCTCTGGCCAAGATCACTGTCACCTGGGAATGCCTTCCATTTGCATGTTCCCAGTTGCCATCTAACACCTACTGAATGGGAGTTTGGAGAGTGGAAGAGAAGGGGGGTGGGGAAGAGTGGAAGAGGAGGAAGCTCTCACCAGTCCATGAAGCATTTTGTGTGTGTGTGTGCAGATTTTGAAAAGATTTGACAGTCTCTCAGGATGCTCTCCTGGGCACACGGGTTGAGCTGTGTGTCTTCCAGAGGCGCTTGTCTAGAATGCTACCTGCCCATTACTTGGTGGTCCTTTCTGTCATTTAAAAAGTTAGCCCAGTCGCCAAGAGAGTGGCATTCTTCAGTCTGTCTAGTGGAATCTGGTACATCTTATCTTCCTGGTTATTGATTACGGGGCCAGGGGACCATTTCTTGACAGAAGCCTCATAGCAATGATAAAAGAAAAGAGGATGCTCAAAGATGCCTTTGTACCTGAACAGGAAAATTGAATACTAAACTGTCAGAAAGGGGGTAAATGTCACAGCAGCCCTTGATACCCTTGGGAAAGTGAGTGAGATCACACAATGTGGTAGGGTAGGGAGACAGGAATGCAGAATGGAATCAGAGGTGGGGCCCTCAGCCAGGAATGGGAGGCCTGAGAGGAGAACCCATGGGCTATCAATAACAAGAAATCAGCTTCTCCATGGCCCCCAGAAGCAGAACTAAGCAGCCTTTCTGTCCTACACACCACTGTGACCACCGAGGCAAATGAAAACTACCTTTGGGGTTCATCTATTCCTATGTAGCTCTCTGCCACCCTAAGACTCTCAGCGATGCCTATATAATTACCACAAGGGGCTTGAGACAGGGCAAGAGGAAGACATCCCAGAGTCATATAAGCGAGAAACCAAGTTAAAGTCAATAGCTACATTAGAGGGTTTAGTCAACATGCAAGTAGCCAAATAACCACAAGTGGACATGACTCACTCCTAGAACCCTCTAGATGTGGACGCGTAGGGTGCCTGTCCAGTCTGTATGTCTCTTCCTCACTTGATGGACAGAGTATCTGAAATGAGAATGGCCCCAGAAAAGCCCCTAGCTTTCCCACTCTGCCCCACAGCCTGCTGTTTGCCTTCACCCAGAGCTGTACTAAGGCAGGCAGTGATTATTAGCAGGCTGGTCTTGCGGCTACAGATGTGAGCCTCCCTGTTATCTATGACTGAGAGAGACTTTTTGTCAACATCCAATAACCAGGTGTCATTCCACAACCACAGTCGAACGTCTCCATGTTCTTTCTACACCAGCGTGGTGGTTGTGCCCTGGGAATAAAGACATAAAATAGCATCAACTCCTTTCCTGTTCTGTCAGGACAAACTATGGACAGAGGTGGTATGCTGGTGGATCACTTGCCTCTGCCGTCTGTGCCATCACTTAGAAGATGTTGGGGATTGGGAAATAAAGAGAAGTTATGACCAGATACCATGGTTCTTCTCCTCCACTCATCTACCCCACGGATTATTAACAAATGTCTGTTTTACTCTAACATGTATTTAATAGTTTGCTGGCCAGGGTCAGGACATTGAATCAAAATAGTTTTCTTTTTTTTTCCCCCAACATGCCAGACATTGTAATAGCGTAAGGAGTATGAGGATTTGGGGCTATGCCTTTGAGAGGGGAAATAATGACGTACGTCCCAGATGATTTATTTACTACATTCATGCAATCACAAGTGCCCAGGGAATGCTGGTTTTCCGGGGAGGTCCCCGGCTTAATGCTTCAGGCATTAAATGCATGAACATCTCTTTAGTGCTGCCTAGCTGAAGTTTATCACGGTCATTCAGCCATTGCCTAGCAACTTGAGAAGCCTATCAATGGGCTCTTTGTCTCCAGTCCTGGCAAAAACACTCCCTCACTCCCTCACAGATCTCCTTATCAGCATTCAAAATTTTATCAGGAAGAAGTGTTTCCATTGAGCAAAACTGCTTACAGCTCTAAACCCACCCTCTTCCCATTTGCCCCCCTCTTCCAAATATTTTAGAAATTATTTTCCGAAGCAACTAGTTTTGAAGTTTTTAATCTGCTCCTTGGTCAACATCCCAAAGAAATTGTCTTAGAGTGTTTCATTATTTTCCTATTCCTCTTTAGTTGGGGATAACGGCTCCCAGGACACAAAAGTTCACCTTCCTGATTCGGGAAGGAAAAGGTGCTAGCACACATAAGGACCCATGTCGTGAGGACCTCCCTGCTCTGGCTTCTGCCCTCCTGAGGCCCCAGGTGCAGGGCAAGTATTTTCCCACTGCTCACTGGTCACATCCTCTCTGCACACACCACCCCAGAGGCAGACACACTGAAAACATCACCTCCTTAATCAAGACACCCTGGTACCCAGGGCCAAGCATTACCCTCCATGTGTGTTAGTTCCTAGATAGTGAGTGCAGCCAGGCTCTCTCGCTCTCACAGCTGACGGGATACATTGTTTTGGGTAGAGTAGGGAACAGAGGAACTTTCCACTTGCATCTTCTCCATCTGTCTCTAGAATTCTTCTTCCCTTGTGGGTGGCTTTGTTCTGTGTCTTCTCATTTTTTTTCCATTTGTCACCTCAATAATCTCAATTTGTCTCCTGACTTTTTGTCTCCAAGACTCATCTCTTCACACCATCATCCACTCTCCTATGAAACACAAATGTATCCATGCCATCATCCCTCATTTGGTCTCTGATAACATGGCATATGAGTGTGGGGGCAGGAGAGGGTCTCCTCCCACAGTAGGATGCTTTTAGCTATTCTCCATGGGTCCATGGTTGTTCACATGCTTCTCTCGGTATTTCTAGTTCCTAAGTTTCACCTGTTCCCAACGTTGGTAAGTTCTGAATACTTCTGAATGATTCTGCAATACTTGTTGGAACTTTGAGTTGTGTACCCACTATTCCCTCAGCCTAGACCTGTCTTTCCTCTTCCTTGATCCAGGTCACTAGACAAAGCTGGGGTTGTGATCTGCGGCTTTATCACCCTGGAGTTAACTTTTTTTTTTTGGAGGATGTCTTACCAACAAGCCAACACTAGCTAGATTCCTAGAAGGCGTACTGACTTAAATTATTTTTCATCTTTGGCAAATAAGGAAACGAAGATACGTTTGATGGGCCCTACCAAAGTTGGCAAATATGAGATCAATAGAAATAACGAAAGGATGGCGGTATTAAAGCAAATTCACAATTCTCTCAGCACCTCTTGATCTTGCAGCATGCCTCACACATCCCTGACCTGATGCCAAAAGGTGATTCAAAGGAACACTTCACCAGGACTTAATTGTGATTCTCACTGCCTGAAGTTTTACACTTTGGTATTTATTTCTTAGATTCTCCAAATGTGGGCCTTCTTGGAATATTAGTAATCTCTAGGAAAAACAGGATCCCAGCAGTAATAGATTTATCATGCCCTTCCTTGAATATATAATAAAAGAGATGGCAAGAAGCATGGAGGATCCGAGGAGAGGTAGGGATGTAGGATAAAGGATGCTGCAGAGGAAAAGCACCATCTTGCTTTTCTGTGGGCTTGTCTCATCTCTAACACTTGTCTTGAAATAGATTAGGTGTCAATATCTACAAAAAGATGACTCCTTTACTACCCAGAATAAAAGAAGAGAGTTGAATTTCCCAGAGAGAACAGAAAAATGGGATGTTTATAGTTTACATTCGACAGAAAGTTTTCTTTTGCAATCCTAAAAAGTAAAGAAACCCAAGCTATTTAAAAAGCATGCTTGGTTCCGTTGAGATATGCTTATACAGCTGCAGGCAGGCAGTCTCCGAAAGAGAATGATGGGTACATCGTGGGAAACATGGGGGGTCCCCCCCCACCCCCAGTTGTTCTCTTTGCTGTTCCATGGTGCTTTTTGCTTATTGGAAAAATTACCTTGATGAAGTTGATCATGACAGATGGGTGTGCTAGCCAGCTGGACAAGTCTCTTGAGGGAAGAGGAATCAAGTACCAAAGGATCACTTAATTTACATCTGGCCTTCAGTCATTTTTCATAACTAACCCTGTGTGCTTATCCACAAATCATGTTAACCTATAATACTCAAAACCAGTGTGGCGGTGTCTCTGGTTGTCAACTTGACTACATTTGGGATTCACTCTAACCCAAGTGGCTGGGTCTACCTGGGAGGGATCCACCTTTAATCTGGACCCCACCTTCTGGTGGCAGCCTATGTAGAAGACACAGAAGAAAGGAGGGCTTCCTCTTTGCCTGCTTGCCCTTCTTACCAGCAAGTTCGTTCCCTTGCTGGCATTAGAACCAACGTCTTTGGTATCCTGTTGTATACTGAGACATTGAGGTTTATGAATTGAACAACTATTGGATTCTTTGACTTTCTGCCAGCAAGCAGCTATTGCTGGAATAGCTGGACCACAGCCTGTAAGCCACTCTAATAAACCAGAGTATACATATCAGAGATTACCCGATCAGTTCTGTTTCCCTAGAGAATCCTGACTAATACAGCTATATATTACAGCTGTATATTATATATTATAGCTGAATTTAGATGTAATGTGATTTGGCCAACAGTTGATAAAGTAAGTCACTTTAAATGGCCAAGTATCAACCCTCAAACCCCATTCTGCATTAAAAAAAAAAAACAGTACTGAGAAGTCAGAAGTAGTTTTCAGGTTGATTATAAGGTTATCTGGGTAATTGTTTGGGCTCCACATCCTCAGGCTTCCCTCTGAGATTAACCTGAATGGCTCTGGGTCAAAATGCCCAAGGACATCTGAATCTGGGAAGCAGGTGGCCCCTTCCCACCTTGGCTGTCAAACAGGAGCCCTGGCTTACAGTAAGGATGGAAAGCCTGAGTTCCAATGGAGAGGGAAGCCCCAGGCAAGTTGATTAGGCTTGCTAGTATTTTCTTTAGACGTGAAGCAAGACTTTCATGTGCAGCCTGCTCCTGAGTTCGAAGCTCCTCTGACTATCTGACGATTCTGTGTGGTAGAGTTATTAGTTTGGTACTTCACATTCAGAGGGTGTAGAATTTACAAGTCTGTCTCAGCTTCCCAAAAGACCTTGAAAAGTAAGATGTGTGTGAACACAAGAAAAACAACAGGCTCCCGCTCCATTTACTTATCCTGTGGGGGAAAACTTAGTCCCCAGTCAGTGTTCTCTCTTCAACTGGTTTCCTCCAGAATAAAAGTCTGTCACTGACCTGAGCTGGACAAAATGGAGCTGGGCTTGATTTGCCAACCTTTCCCATGCTAAGGACTTTTCTAGAAGATGAACATGGAGACAGGAAAAACTAGAAATGAATTATTCTACAGAAATGGCTTTAACCTGGCGACATACTTGTGGTCATTTGCAATGACATCCCATTAGGTTCAGGGCACAATAACCTTTTTCCAGAATGACAGACAAAATGTGGTGTGTCCTGCCTGGTGTCCTCCAGGCAGGGTCACCATGAGCTTTCTGGGATACAAGAGCGAGTATATCCTCCCTGTGTTATCCCATGGTCCGAGGCCAGCAGTCACCAGCGCAGCCCAAGTTAGAACTCTTTCCTTTGCAGGGGAAGGTCTCTGAGAGTTATGATGTAACACAGAGATCCCTGTTGTACTTCAAATATGAATTTATGAGACTTTCCTGTACCTCCAGTAATACCTGGCATTATTCTCCTCCTTCACAGATTGGCTTCCTGTAGGTGTGTTTATTGGGTCATGACTAGTTTAAGGGTTCTTTATCTGCCAAGTAAAAATATTAGCTCCATACAGCTTCATAAGAGTTACTTAGACCAAAGTACTTAAACAGGGTTGGGCTGGGCTATTCTGCCTCTACGTGAAATCCAGCGACACATGTGAGTGTGTCAGCTCACCCAGCACACTAGATCTTTGAAATATTTTAGGACTGTGTGCCCTCCTCCCCAGTAGGGTCTCCTTCATGTGGCATAATTTAATCACTTTGTGCTTTTTAAAATTTCTCTGTAAAAACAAAATGGCGGTGGGGTGGGGTGGCACAAGTAGGAAATCAATAGTATTTTCTTTTTCTGATAAATTTTGCCTTCAATAGACAGGGCCCTGGGGCTCCCTGTTGGTCCTTTCTATTAAAGAAGAAAAGCCAATGTGGTGAAATAAATGTTCTCTCCTTGACTGCGTGGGAGGGAGTTCCGGGTATTAGATGACGTTAGGATGATTCTGTGCGTTTAGTGTGTACACGTGATGCGATGATAACTGGATTTAAGTCTGGTGCCATCTCTACTGCTTATTGTTGTCTGAAATAGTTGCTTGTGCACCATTCCTGACCCCCACTGTTGTATTAGTGACCTCATGTCTCCACACTGCGCCTCCCTCATCCCCACCCCGTGTGTGATGTTTCAG
Seq C2 exon
GTGTGCACTGTGACAGTGTGTGCGCTGAGGGACGCTGGGGTCCTAACTGCTCGCTGCCCTGCTACTGTAAAAATGGGGCTTCGTGTTCTCCGGATGATGGCATCTGTGAGTGTGCACCCGGATTCCGAGGCACCACTTGCCAGAGAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000024593-Megf10:NM_001001979:13
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF126612=hEGF=PU(69.2=25.7)
A:
NA
C2:
PF126612=hEGF=PD(23.1=6.0),PF0005319=Laminin_EGF=PU(61.7=58.0)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: