MmuINT0104458 @ mm10
Intron Retention
Gene
ENSMUSG00000025885 | Myo5b
Description
myosin VB [Source:MGI Symbol;Acc:MGI:106598]
Coordinates
chr18:74744621-74759312:+
Coord C1 exon
chr18:74744621-74744771
Coord A exon
chr18:74744772-74759026
Coord C2 exon
chr18:74759027-74759312
Length
14255 bp
Sequences
Splice sites
5' ss Seq
TAGGTAAGC
5' ss Score
8.89
3' ss Seq
TAACCATGCCTTCCTTCCAGTTT
3' ss Score
8.48
Exon sequences
Seq C1 exon
GGTTTCATGACACAGAACACTGCGAAGCAGAATGAGCACTGTCTCAAGAACTTTGACCTCACTGAATACCGCCAGGTGCTAAGCGACCTTTCCATTCAGATCTATCAGCAGCTCATTAAAATCGCCGAGGGCTTGCTGCAGCCTATGATAG
Seq A exon
GTAAGCTGGAGCTGCACCCGTCTCGGGGTCTGGAGGAGAGGAGGGCTGTGGCAAGTTTGCCTTGCCTTTTGGGAACCAAGTGTGACTAGCTGTGGCCTCCAGGCCAGAGACTTCCTGGGGAAGGCACGAAGTCGTACACATTGCGCTTAAGACTTGGGAAATTTTCAACAGCATACTATAAAGCACGACGCCAGCAGAGTGAGGTGGCTTTCCTTAATGGTTTGTTTTTCTGTAGTAATTTTCACAAGCTATATAATGATGTGAGTGCAAACACAATGAAGACAGCCTCTTCTTGCCAGGGAGGTGCTTGTGGATCAAGCTGCAGGAAGCACGGGGCAATCCTATTTACTTACTTTGTACACTTTTTTTTTAAAGATTTATTTATTGATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATTTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGTTCTTACCCGCTGAGCCATCTCACCAGCCCTACTTTGTACACTTAATGAGTGCACTTGAGTGTTGACTGTGAAATCAGAATGGAAAGAACGGCTACATTGTAACAATAGACTGACACATGTTTGTCACCCAGTGCTCCATGAAGGCAGAGGGAGAGAAGTTAAACCTGGACCTGTGTAATGGCATCTCCAGGTCCTCCCAATACAAACGGGCTGAGTGAATTCCCAAAAGGAGCAATCCAGGATAGTTCCTGAGAAAAGTTTCAGACCAAATCTTCCATCCTGTCAAGCTTTCTTTTAAGGTCTGTATTAGTCAGGGTTCTCTAGAGTCACAGACTTATGGATAATCTCTAAATAGTAAAGGAATTTATTGATGACTTACAGTCGGCAGCCGAATTCCCAACAATTGTTCAGTCGCAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGCAGCAAGCAGGCAAAGGAGCAAGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGATGAAAGGCATAGCCCAGATTAAAGGTGTGTTCCTTAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGGCTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCACTACAATCCACCCCTTGTCAACTTGACACAAATAATATCTCATGTTCACATGAAACAATAACAAGGTTGTAAATACGCCTAACATGATATAACTATCCCTCGTACAATCGCAAACGCATTAGTAAATTTACAATGGGCATTCATATTACTTTATAATCCTCGTTTCTGCAACTGGTTACGTGGCCTTAATTGGTATTTATAACTACCTTCCTCTACTACCCATTCTGTATTTCCTTCACCTTCAGCCAGCACCTCAGCAGGTCTTGGCTCTTTTCCTGGAGGATTGACCCATACCTTCATTCCTGATGGGTCTGCGTCCTTTGTCATCCTGCTTGGATTAGGCTGTTGTAGTTTCCCATTGACTTTAATCACAGGACATGGTAGTACTAAGAGACGCCCTAAGGGATCTCCTGCACTCCAGACATAATCTTGCTTACCACCATTGTGAAGAGGTAATCCAATTTCCCCATGGTAATCTGGATCTATCACCCCTCCTAACACTGTTATTCCTTTTTTAGCCTGTTGGTTTAAGGGCATTAGAAGCCCAAAATGACCAGGGGGAAGTCTGAGCTTCCAGTTCAATGAAATGTTTGTTGTAGCTCCTGGTAGGAGCACTCCCCTCTCTGGAGCCAAAACTTCTAAGCCAGCAGAACCTAGAGTTATGGGGACAGGAAGCAAAAATTTTCCTAGAGGGTCACTAGGAGTGATAGTAAGTGGAACTATTCCGTTTTCCACCCCTTGATTCCTGGACCCATGAATCCTGGCTATGGGTGAAACTGTACCATATATCGAGCGCTGATTCAAAGCATATACTGCCTTCTGAAGAACTCTGCCCCAGCCTTCCAAGCTGTTACCACCTAATTGGCGCTGTAACTGCGTCTTCAAAAGGCCATTCCATCTTTCTATCAGCCCAGCTGCTTCAGGATGATGGGGAATGTGGTAAGACCAGTGAATTCCATGATCGTGAGCCCACTGTCGTACTTCTCTGGCTGTGAAATGAGTTCCTTGGTCAGAAGCAATACTGTGTGGAATACCATGACGATAGATGAGGCATTCTGTCAGTCCGTGAATGGTGGTTTTAGCAGAGGCATTACGTGCAGGAAAGGCAAATCCATAACCAGAATAAGTATCTACTCCAGTAAGAACAAAACGCTGTCCTTTCCACGAAGGAAGTGGTCCAATGTAGTCAACCTGCCACCAGGTTGCTGGCTGGTCACCTCGAGGAATGGTGCCATATCTGGGGCTCAGTGTTGGTTTCTGCTGTTGGCAGATCTGGCAATCAGCAGCAGCTGTAGCCAGGTCAGCCTTGGTGAGTGGAAGCCCATGTTGCTGAGCCCAAGCATAACCTCCATCTCGACCACCATGGCCACTTTGTTCATGTGCCCATTGAGCAATGACAGGGATGGCTGGGGAGAGAGGCTGATTGTCCACAGAACGGGTCATCTTATCCACTTGATTATTGAACTCCTCCTCAGCTGAAGTCACCTTTTGGTGAGCATTTACATGGGACACAAATATCTTCACATCCTTTGCCCATTTGGAGAGATCTATCCACATACTTCTTCCCCAGATGTCTTTCTCACCAATTTTCCAATTGTGATCTTTCCAAGTCCCTGACCATCCAGCCAATCCATTGGCTACAGCCCATGAGTCAGTGTATAATCGTACATCTGGCCATTTCTTCTTGCAAACAAACTGTAATACCATGTGTACTGCCCGAAGTTCTGCCCACTGTGAAGATTTCCCTTCACCTGTGTCTTTCAAGGTTGTCCCAGAAAGGGGTTGTAATGCTGCAGCTGTCCACTTCTGGGTGGTGCCTGCATAACGTGCAGAGCCATCAGTAAACCAGGCTCTAGTCTTCTCCTCTTCGGTCAGTTGATCATAGGGAACACCCCATGAGGCTATAGGTGCATGCTTGGCAGCAGATGGCATTGTAACAGGAGTAGAAACCATAGGCATTTGAGCAACTTCTTCATGTAACTTGCTTGTGCCTTCAGGACCTGCTCTGGCCCGATCACGTATATACCACTTCCATTTGATAATAGACTGCTGCTGTGCGCGTCCCACTTTATGACTTGCAGGGTCTGATAATACCCAGCTCATGATGGGTAGTTCAGGTCGCATAGTAACTTGGTGTCCTATTGTCAAACGTTCAGTTTCCACTAAGGCCCAATAGCAGGCCAAGAGCTGTTTTTCAAAGGGAGAATAGTTGTCTGCAGATGATGGTAGAGCTTTGCTCCAAAATCCCAAAGGTCTTTTCTGTGATTCACCTACAGGGGCCTGCCAGAGGCTCCAAACAGCATCTCTATCAGCCACAGACACCTCAAGTACCATCGGGTCTGCTGGGTCATATGGTCCAAGTGGTAGAGCAGCCTGCACAGCAGCCTGGACCTGTTGAAGGGCCTTCTCCTGTTCCAGGCCCCACACAAAGCTAGCAGCTTTCCGAGTCACTTGGTAAATAGGCCTAAGTAACACACCCAAGTGAGGGATGTGTTGTCTCCAGAATCCAAATAGACCCACTAAACGTTGTGCTTCTTTCTTGGTTGTAGGAGGGGCCAGGTGCAATAACTTATCTTTCACCTTAGAAGGAATATCTCTGCATGCCCCACACCACTGGACTCCTAAGAATTTCACTGAGGTAGATGGTCCTTGAATTTTGGTTGGATTTATTTCCCATCCTCTGATACGCATATGTGTTACCAATGAGTCCAAAGTGGTTGCTACTTCCTGCTCACTTGGTCCAATCAGCATAATGTCATCAATATAGTGCACCAATGTGATATTTTGTGGAAGATCCAAACGATCAAGATCCCTTCTAACTAAATTATGACACAGGGCAGGAGAGTTAATATATCCTTGAGGCAAAACTGTGAAGGTATACTGTTGGCCTTGCCAACTGAAAGCAAATTGCTTCTGGTGGTCCTTATGGACAGGTACTGAGAAGAAGGCATTTGCCAGATCAATAGCCGCATACCAGGTGCCAGGAGATGTGTTAATTTGCTCAAGTAAGGAAACTACATCTGGTACAGCAGCTGCAATTGGAGTTACTACCTGATTTAGTTTTCGGTAATCAACTGTCATTCTCCATGATCCATCTGTTTTCTGCACTGGCCAGATAGGAGAGTTAAATGGAGATGTGGTGGGAACCACCACCCCTGCATCTTTCAAGTCCTTGATAGTGGCAGTAATTTCTGCAATTCCTCCAGGAATACGATACTGTTTTTGATTCACTATTTTCTTTGGCAGAGGCAACTCTAAAGGCTTCCATTTGGCCTTTCCAACCATAATAGCCCTCACTCTACAGTTCAGGGAACCAATATGAGAATTCTGCCAATTTCTGAGTATATCTATCCCAATTATACATTCTGGAACTGGGGAAATCACCACAGGATGTGTCCGGGGACCTACTGGACCTACTGTGAGTCGGACATCAGTCAAAACTCCATTAATCACCTGCCCTCCATAAGCCCCTACTTTAACTGGAGGGCCACAATGTTTCTTGGGATCCCCTGGGATCAGTGTCAACTCAGAACCAGTATCCAGCAGACCCCGAAAAGTCTGATTATTTCCTTTTCCCCAGTGTACAGTTACCCTTGTAAAAGGCCGTAGGTCCCTCTGGGGAAGAACTGGAGAAAGGGTAACAGCAAAACCTTTGAGTGTCTTATCAAGATCCTTCCTCAGAGGAACCTGGCCACCCCTTCATTCAAGGGGTTCCGGATCTGCAAACTGTCTCAAGTCTGGAAATTGATTCACTGGCCGAGATTGCTGTTTACCACGATCTAATGTAGCCTTTCTTTCATTTGTTTGAGAATTTTTCTGCTTATACAGATGTATTAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGATAGTCTCTAGATAATAAAGGAATTTATTGATGACTTACAGTCGGCAGCTCAATTCCCAACAATCGTTCAGTCACAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGCAGCAAGCAGGCGAAGGAGCAGGAGCAAGAGCTCGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGATGAAAGGCATAGCCCAGATTAAAGGTGTGTTCCTTAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGGCTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCACTACAATCCACCCCTTGTCAACTTGACACAAATAATATCTCATGTTCACATGAAACAATAACAAGGTTGTAAATACGCCTAACATGATATAACTATCCCTCGTACAATCACAAACGCATTAGTAAATTTACAATGGGCATTCATATTACTTTATAATCCTCGTTTCTGCAACTGGTTACGTGGCCTTAATTGGTATTTATAACTACCTTCCTCTACTACCCATTCTGTATTTCCTTCACCTTCAGCCAGCACCTCAGCAGGTCTTGGCTCTTTTCCTGGAGGATTGACCCATACCTTCATTCCTGATGGGTCTGCGTCCTTTGTCATCCTGCTTGGATTAGGCTGTTGTAGTTTCCCATTGACTTTAATCACAGGACATGGTAGTACTAAGAGACGCCCTAAGGGATCTCCTGCACTCCAGACATAATCTTGCTTACCACCATTGTGAAGAGGTAATCCAATTTCCCCATGGTAATCTGGATCTATCACCCCTCCTAACACTGTTATTCCTTTTTTAGCCTGTTGGTTTAAGGGCATTAGAAGCCCAAAATGACCAGGGGGAAGTCTGAGCTTCCAGTTCAATGAAATGTTTGTTGTAGCTCCTGGTAGGAGCACTCCCCTCTCTGGAGCCAAAACTTCTAAGCCAGCAGAACCTAGAGTTATGGGGACAGGAAGCAAAAATTTTCCTAGAGGGTCACTAGGAGTGATAGTAAGTGGAACTATTCCGTTTTCCACCCCTTGATTCCTGGACCCATGAATCCTGGCTATGGGTGAAACTGTACCATATATCGAGCGCTGATTCAAAGCATATACTGCCTTCTGAAGAACTCTGCCCCAGCCTTCCAAGCTGTTACCACCTAATTGGCGCTGTAACTGCGTCTTCAAAAGGCCATTCCATCTTTCTATCAGCCCAGCTGCTTCAGGATGATGGGGAATGTGGTAAGACCAGTGAATTCCATGATCGTGAGCCCACTGTCGTACTTCTCTGGCTGTGAAATGAGTTCCTTGGTCAGAAGCAATACTGTGTGGAATACCATGACGATAGATGAGGCATTCTGTCAGTCCGTGAATGGTGGTTTTAGCAGAGGCATTACGTGCAGGAAAGGCAAATCCATAACCAGAATAAGTATCTACTCCAGTAAGAACAAAACGCTGTCCTTTCCACGAAGGAAGTGGTCCAATGTAGTCAACCTGCCACCAGGTTGCTGGCTGGTCACCTCGAGGAATGGTGCCATATCTGGGGCTCAGTGTTGGTTTCTGCTGTTGGCAGATCTGGCAATCAGCAGCAGCTGTAGCCAGGTCAGCCTTGGTGAGTGGAAGCCCATGTTGCTGAGCCCAAGCATAACCTCCATCTCGACCAGCATGGCCACTTTGTTCATGTGCCCATTGAGCAATGACAGGGATGGCTGGGGAGAGAGGCTGATTGTCCACAGAACGGGTCATCTTATCCACTTGATTATTGAACTCCTCCTCAGCTGAAGTCACCTTTTGGTGAGCATTTACATGGGACACAAATATCTTCACATCCTTTGCCCATTTGGAGAGATCTATCCACATACTTCTTCCCCAGATGTCTTTCTCACCAATTTTCCAATTGTGATCTTTCCAAGTCCCTGACCATCCAGCCAATCCATTGGCTACAGCCCATGAGTCAGTGTATAATCGTACATCTGGCCATTTCTTCTTGCAAACAAACTGTAATACCATGTGTACTGCCCGAAGTTCTGCCCACTGTGAAGATTTCCCTTCACCTGTGTCTTTCAAGGTTGTCCCAGAAAGGGGTTGTAATGCTGCAGCTGTCCACTTCTGGGTGGTGCCTGCATAACGTGCAGAGCCATCAGTAAACCAGGCTCTAGTCTTCTCCTCTTCGGTCAGTTGATCATAGGGAACACCCCATGAGGCTATAGGCGCATGCTTGGCAGCAGATGGCATTGTAACAGGAATAGAAACCATAGGCATTTGAGCAACTTCTTCATGTAACTTGCTTGTGCCTTCAGGACCTGCTCTGGCCCGATCACGTATATACCACTTCCATTTGATAATAGACTGCTGCTGTGCACGTCCCACTTTATGACTTGCAGGGTCTGATAGTACCCAGCTCATGATGGGTAGTTCAGGTCGCATAGTGACTTGGTGTCCTATTGTCAAACGTTCAGTTTCCACTAAGGCCCAATAGCAGGCCAAGAGCTGTTTTTCAAAGGGAGAATAGTTGTCTGCAGATGATGGTAGAGCTTTGCTCCAAAATCCCAAAGGTCTTTTCTGTGATTCACCTACAGGGGCCTGCCAGAGGCTCCAAACAGCATCTCTATCAGCCACAGATACCTCAAGTACCATCGGGTCTGCTGGGTCATATGGTCCAAGTGGTAGAGCAGCCTGCACAGCAGCCTGGACCTGTTGAAGGGCCTTCTCCTGTTCCAGGCCCCACACAAAGCTAGCAGCTTTCCGAGTCACTTGGTAAATAGGCCTAAGTAACACACCCAAGTGAGGGATGTGTTGTCTCCAGAATCCAAATAGGCCCACTAAACGTTGTGCTTCTTTCTTGGTTGTAGGAGGGGCCAGGTGCAATAACTTATCTTTCACCTTAGAAGGAATATCTCTGCATGCTCCACACCACTGGACTCCTAAGAATTTCACTGAGGTAGATGGTCCTTGAATTTTGGTTGGATTTATTTCCCATCCTCTGATACGCATATGTGTTACCAATGAGTCCAAAGTGGTTGCTACTTCCTGCTCACTTGGTCCAATCAGCATAATGTCATCAATATAGTGCACCAATGTGATATTTTGTGGAAGATCCAAACGATCAAGATCCCTTCTAACTAAATTATGACACAGGGCAGGAGAGTTAATATATCCTTGAGGCAAAACTGTGAAGGTATACTGTTGGCCTTGCCAACTGAAAGCAAATTGCTTCTGGTGGTCCTTATGGACAGGTACTGAGAAGAAGGCATTTGCCAGATCAATAGCCGCATACCAGGTGCCAGGAGATGTGTTAATTTGCTCAAGTAACGAAACTACATCTGGTACAGCAGCTGCAATTGGAGTTACCACCTGATTTAGTTTTCGATAATCAACTGTCATTCTCCATGATCCATCTGTTTTCTGCACTGGCCAGATAGGAGAGTTAAACGGAGATGTGGTGGGAACCACCACCCCTGCATCTTTCAAGTCCTTGATAGTGGCAGTAATTTCTGCAATTCCTCCAGGAATACGATACTGTTTTTGATTCACTATTTTCTTTGGCAGAGGCAACTCTAAAGGCTTCCATTTGGCCTTTCCAACCATAATAGCCCTCACTCTACAGTTCAGGGAACCAATATGAGAATTCTGCCAATTTCTGAGTATATCTATCCCAATTATACATTCTGGAACTGGGGAAATCACCACAGGATGTGTCCGGGGACCTACTGGACCTACTGTGAGTCGGACATCAGTCAAAACTCCATTAATCACCTGCCCTCCATAAGCCCCTACTTTAACTGGAGGGCCACAATGTTTCTTGGGATCCCCTGGGATCAGTGTCAACTCAGAACCAGTATCCAGCAGACCCCGAAAAGTCTGATTATTTCCTTTTCCCCAATGTACAGTTACCCTTGTAAAAGGCCGTAGGTCCCTCTGGGGAAGAACTGGAGAAAGGGTAACAGCAAAACCTTTGAGTGTCTTATCAAGATCCTTCCTCAGCGGAACCTGGCCACCCCTTCATTCAAGGGGTTCTGGATCTGCAAACTGTCTCAAGTCTGGAAATTGATTCACTGGCCGAGATTGCTGTTTACCACGATCTAATGTAGCCTTTCTTTCATTTGGCTGTTTACCACGATCTAATGTAGCCTTTCTTTCATTTGTTTGAGAATTTTTCTGCTTATACAGATCAAACAAATATGCAGTAGGCTTCCTATGTATTTCATTCCTGGAAACACCATGATTGGTTAGCCAGTACCAAAGGTCCAACCGAGTCATGCCATTATAAATTTCACCTCTCCTGTGCTGACCATTACTGGGTATGTTATTATAAACATTCTTTTGTCTACGCTGTCCATTATAATAACTAGAATCACCTTGTCTCCGGCGATTCAATGCTGCCACCTGGCCCTTGTTACCTCGGAATCCAACTAAACCCAGTGAATTTAATTCATCTAATTGAGCAGAAGCATCTCCAATGCTAAGATCTGGCACAAGGAAAAGGGAAAGAACAAAACCCTTCAAATGTGCTGGTGCCCCTCTCACCAATTTGCGTCTTATAGAGCTAGTGAAAGGCATATCTTCTGGACCTTCCCATTGTGGACAATTATGCTTTACACAATATATCCACTCTAGCATTGCAATTTCCCTAAGTCTTAAAATCCCTTCATCAACACTAAGCCACGGAATATCAGGCATCTCCAAGTCATTTCCAGTAGGCCATCTTTTGATAAACACCTCAGCCAACCATTCAAACAAACTTTTGACACCTTTTTTAACTATGCGAGCTTCCGTATTAAACCTAGAATCTCTACTCAGAGGACCCATGTCAATAAACTCAGCCTGCTCTAGTCTTATGTTCCTTCCACCCTTATCCCACACCCTTAAAATCCATTCCCACACATATTCACCAGGTTTCTGCTTGAATGAATTAGCAAACTCATTAAGCTCTTTAGTAGTGTAGCGAATTTCCTCATGGACTACACTTTCTACCTCCCCTCTAGGAGCCTGTTTTGCTTTGAGTCTGGTTACAGGTCTAGAAGAAACTATTGGTGGGCCGTGAGCAGACTCTGCAAAATTAATTTCCTCATGTGGGGAAGGCATTATTTCAAGGGGTGGGGCTGAGGGTACTACTTCCTCAGGTGGGGCAAACCCTTGAGAATCTGAGGATTCAAAATTCTCAGCTTCAACATGGTCTTCCCACACATCCCCATCCCATGTTGTAGGATCCCATTCTTTGCCAATTAGAGCCCTTACTTTAACTGTCGACACACTCTGAGGCTGAGACTTGAATTTTCGCTGTAGTTCAGCCAACCTTACAATGAGAGTTTCTGTTTGATTTTCTGCAACTTGAGCTCTATTGCTACAAGAGAGAAGATTCTCCTCAAGGACACACTTAGCAACTTTTAGATCGTTTACTTGTGTCTGGAGCCTTTCGATTTTATCACACAACTCCTTCCTTTCATTCATCATTTTTTCCACAGATACTAAGAGCAGCCAGCCAGTAAAATCATTTTTCGATTTTTTCCCCATCTTGTAGAAAGCTTTGTGCACTGAATCACCTAATTCATTAAGAAAATCAAGGGCATTAGCTTCTTTAAGTTCGGAATATAGTTTCAACCATGGGTCTTCAAAATTCTCTGAGCTCCCAGGAGGGAGAGAATCTGGAGAGGTTTCAATAGTTGAAAGTGCTGGTGGATCAACAAGCCAATTCCAGAATTTTAAAAGATTCATCCTTGTACTTCTGTTACTCTAGAACCACTCCTGGTACCAACTTCTGTATTAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGATAGTCTCTAGATAATAAAGGAATTTATTGATGACTTACAGTCGGCAGCTCAATTCCCAACAATCGTTCAGTCACAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGCAGCAAGCAGGCGAAGGAGCAGGAGCAAGAGCTCGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGATGAAAGGCATAGCCCAGATTAAAGGTGTGTTCCTTAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGGCTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCACTACAACAGATCAAACAAATATGCAGTAGGCTTCCTATGTATTTCATTCCTGGAAACACCATGATTGATTAGCCAGTACCAAAGGTCCAAGCGAGTCATGCCATTATAAATTTCACCTCTCCTGTGCTGACCATTACTGGGTATGTTATTATAAACATTCTTTTGTCTACGCTGTCCATTATAATAACTAGGATCACCTTGTCTCCGGCGATTCAATGCTGCCACCTGGCCCTTGTTACCTCGGGATCCAACTAAACCCAGTGAATTTAATTCATCTAATTGAGCAGAAGCATCTCCAATGCTAAGATCTGGCACAAGGAAAAGGGAAAGAACAAAACCCTTCAAATGTGCTGGTGCCCCTCTCACCAATTTGCGTCTTATAGAGCTGGTGAAAGGCATATCTTCTGGACCTTCCCATTGTGGACAATTATGCTTTACACAATATATCCACTCTAGCATTGCAATTTCCCTAAGTCTTAAAATCCCTTCATCAACACTAAGCCACGGAATATCAGGCATCTCCAAGTCATTTCCAGTAGGCCATCTTTTGATAAACACCTCAGCCAACCATTCAAACAAACTTTTGACACCTTTTTTAACTATGCGAGCTTCCGTATTAAACCTAGAATCTCTACTCAGAGGACCCATGTCAATAAACTCAGCCTGCTCTAGTTTTATGTTCCTTCCACCCTTATCCCACACCCTTAAAATCCATTCCCACACATATTCACCAGGTTTCTGCTTGAATGAATTAGCAAACTCATTAAGCTCCTTAGTAGTGTAGCGAATTTCCTCATGGACTATACTTTCTACCTCCCCTCTAGGAGCCTGTTTTGCTTTGAGTCTGGTTACAGGTCTAGAAGAAACTATTGGTGGGCCGTGAGCAGACTCTGCAAAATTAATTTCCTCATGTGGGGAAGGCATTATTTCAAGAGGTGGGGCTGAGGGTACTACTTCCTCAGGTGGGGCAAACCCTTGAGAATCTGAGGATTCAAAATTCTCAGCTTCAACATGGTCTTCCCACACATCCCCGTCCCATGTTGTAGGATCCCATTCTTTGCCAATTAGAGCCCTTACTTTAACTGTCGACACACTCTGAGGCTGAGACTTGAATTTTCTCTGTAGTTCAGCCAACCTTACAATGAGAGTTTCTGTTTGATTTTCTGCAACTTGAGCTCTATTGCTACAAGAGAGAAGATTCTCCTCAAGGACACACTTAGCAACTTTTAGATCGTTTACTTGTGTCTGGAGCCTTTCGATTTTATCACACAACTCCTTCCTTTCATTCATCATTCTTTCCACAGATACTAATAGCAGCCAGCCAGTAAAATCATTTTCGGATTTTTTCCCCATCTTGTAGAAAGCTTTGTGCACTGAATCGCCTAATTCATTAAGAAAATCAAGGTCATTAGCTTCTTTAAGTTCGGAATATAGTTTCAACCATGGGTCTTCAAAATTCTCTGAGCTCCCAGGAGGGAGAGAATCTGGAGAGGTTTCAATAGTTGAAAGTGCTGGTGGATCAACAAGCCAATTCCAGTATTTTAAAAGATTCATCCTTGTACTTCTGTTACTCTAGAACCACTCCTGGTACCAACTTCTGTATTAGTCAGGGTTCTCTAGAGTCACAGACTTATGGATAATCTCTAAATAGTAAAGGAATTTATTGATGACTTACAGTCGGCAGCCGAATTCCCAACAATTGTTCAGTCGCAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGCAGCAAGCAGGCAAAGGAGCAAGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGATGAAAGGCATAGCCCAGATTAAAGGTGTGTTCCTTAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGGCTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCACTACAAGGTCCTTCCCACATAGAAGAAGAACTGATACATTGAGCTGGATATGTTTCAAAACTTAAACTAATTATGGTTGATTGCACCAGTTCCCAAGTAAGACCTGGGTTCAAATCCTGGTGCTGCCTCTTCCTAACCGCATTCCTATAGCCAAATTATGCAGCTTCTTTATGCTTCCGTTTGCTCATTGGTAAAGTGGGTAGTGCCTCATAGGGCTTCTGGCTGAATGGAAGAGGTCCTGTCCACAGTTAAATGCTATTGAATAAGGGTATTGAAGCAACTGACCTAATAGTTACACGGTGCCTGGCCTAGAACCAACCCTACCAGAGTTGGCTCAGTTCTTAAACTTTGGATACTTGACAGAGGTAGTACAAGGTACAGCTAGTACACATCGATTATTTTTGTCCAACCACCAATGAGTTTAAGTAACATTACATTCCCTAATTAATTTGGAAATCCACCAGATTCAAAATCCTTTGCCAAATGTATTGAGTCCCTGCATATGTTGGCCCTGTGCATGTCTGAATGGCTTCATTGACCTGAGTGGCCTAACAGCAGAGTTTTGAGGGGAACATACAACCTTCTAACCATGCCTTCCTTCCAG
Seq C2 exon
TTTCTGCCATGTTGGAAAATGAGAGTATCCAGGGGCTGTCTGGTGTGAGACCAACTGGTTACCGGAAGCGCTCCTCCAGCATGGTGGATGGAGAGAATTCGTATTGCCTGGAGGCCATCGTCCGCCAGATGAATTCTTTCCATACAGTCCTGTGTGACCAGGGTCTGGACCCCGAGATTATCCTGCAGGTGTTCAAACAGCTCTTCTACATGATCAACGCTGTGACTCTTAACAACCTACTCCTGCGGAAAGACGCCTGCTCCTGGAGCACAGGCATGCAACTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000025885:ENSMUST00000074157:35
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.010
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0184314=DIL=PU(31.1=34.4)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types