MmuINT0178436 @ mm9
Intron Retention
Gene
ENSMUSG00000022335 | Zfat
Description
zinc finger and AT hook domain containing [Source:MGI Symbol;Acc:MGI:2681865]
Coordinates
chr15:67915300-67933163:-
Coord C1 exon
chr15:67933033-67933163
Coord A exon
chr15:67916124-67933032
Coord C2 exon
chr15:67915300-67916123
Length
16909 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGG
5' ss Score
10.07
3' ss Seq
CCTTTCACTTTCCCTCCTAGGTC
3' ss Score
12.1
Exon sequences
Seq C1 exon
GTGATCGACTTGACCCCACCGCTGTGAATATCCTGCAGCAGATCATTGAACTAGGTTCGGAGACCCACGATGCTGCTGCTGTGGCCTCTGTGGTTGCCATGGCGCCCGGCACAGTGACTGTTGTAAAGCAG
Seq A exon
GTGAGGTCCCTCTGCTCAGTATTTGTCTGCTCAAGCCACTACCCATGTTTCTCCTTTCTTTTTCCTCGTAACTTCAGCTTGTGTAGAGTAGAACTTAACCTGAAATTGGTCTTCTTCTTGAATTATTAGGGATTGTGTCTTGAGTGGCTGTGTGTGCAGATGTGTTAGAGAAAGCACCCAGGTGTTTTAGAAGCACCGAGGAGACTCTTCATTTCCTTTCAGAGAATCATAGAATGCAAATGAGCATAATGAGAACCTACCAAGAAGTAAACTAGTAGGAAGCGTGGGGACAGCCAGGGATGCCCAGGAATATTTGCCCATGGACTGTCCTTTTAAACAAGAAGCATTATCACTTTATGTTTGCACAGGAGAGGAAGAAAATGATGGGTTGGAAAGAAGGGTTTTTCTATCACATTGTCCCAGAGCTCCTCATATCCACTCCTTCTCTCCTGTGTCTCCTCAGAAGAGAAGCCACCAGTCTGTCAGAATACAGCGCACGGGGTAATCAGCGTCCTCCGATTGCTCATACCTGCCTCTTTACTACATTCTCAGTTGTTAAGAGTAGTTTACACAGCTACTTTAAAGGTATAAAACAAAACCAGTAAGCACATCAGAACCAGGAAACCATATACTTAAAATGCATAAAGTACGTTTCTCTATACTTTTTAGATTTTTGCCTAGCTGTGTGTGTGTGTTTTTTTTTTTTTATGAGTCACTGCGTATTTATTGAGTACTTGCTGTTGTCAGTCAGAGCTGTGGTGCTGGAGTTCCAGGAAGGAACCAACGCCTGGCATCAGGGTGGCTACTCCCTGTGGAAAGGGATAGAGTAGGAATAAAGTAGTGCGCCATGAAAAATGTAAACTGCTGAACCAATGCAGAGCCAGTGCACATATCACGGCTGGAGGGGGACGAGCACGTGTGGGCTGAAGGCTGTGTGACAAACGGTTGTTGGGCAAGATGTCTCTGAAGTTTGAGGTGTGAGCTACTAGAGCTATCCGATCTTTAATGTGAAATTAGTGTAGGATTTTTTTCTGACTGAAAATAAGAAGGAAACGTGAAACGTTTAACTTAAAGGGTATGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACGCTTTTTCTTGGCACTAACAAAGACACTTCTCACAGTGGGTCTAATATATGCTCTTCTGGGTCATGTGTCCTGGCTAACACTAACTGCCTTTGGGATTAAGAGTGGCTATCTCACTGTTGTCTCTATGACTATACTCAGTACATGGTGCAACACATGAAGTCCATGCCATACAATCCTCTGGGGCATAGGAACTTCTGGTTTAACACTGGATTTCTTGATCCAGAGACAAGACGTCCTGTAGAGGAGTATTTGAATTGGGTGTCCTGGAACCCTTATTCCAGAATGAAGTTTCTCTCCAGGTCTTGGATAGAAGTCAGACACCAGAAAGATAAATGCTTAACTCTGCAGTATCTTGATGAAAAATACACATTCTAGCCTTTTTGTTTTTTTCCTGGCATTTGCTACATTTCAGGCTTCAGATTGTCTTCTGCATATCTTCTGGAACTCCTCACGTATATCCTGGTATGTGGAATCTTAAAGTCGATCTGGTTTCACTAGAGAAGTATTGGGAGTACTTTGCTTGGTTTGTACACGTGAATGCTAAGACTTCAGAAGGTGCAGCTTATTGTCATCTGTGTCTTCTTTCTGTTAAAAATATTTATTGACTGCTGCTCAGGGCTGTGAATTAGTGAGTGTCACGGGCAGTGCTGCCATCCATGAGGTTGCAGATTTAGAGTCCTGCTTAAATAGGACTCTATCCATTGGAATGTCAGCCCAACAGAGGAGAAGGCAGATACGCATCAATACAGCTCATGTCAACAAGTCCAAATTTGCACAGTAGGAAAGGACAGTGGGGCCCCAGAAGGATCTTCTTTCTTACTTCAACCTAGAGCTGCAAGTGGAACTGGGAACTCACTCATGCGGGGCAACATATGGAAATATTCCCAAGGATGTGTGTATCATCATCACTATCTCCTGTACCTGACCGAGCCTCCCTTTCACATGTGGCTCATAATGCATAGAAATAGAGGGAGAGAGGGAGGGGGGAGGGAGGGAGGGAGGGGTGGATGGCCAGAGAGACAGATGTTAACCTGCCCACACCTGTAGCAGAGGGACTGAGAATATCTCAAACTTCGGTAGGTGAAGGAATGTCTGTCCTCTGATTAAATTATCCCATCATTTACGTTTACTTTGGCTGCGTTTATTGGGTTGATTGATCCTTTTTCTTTTAATTAAGCACTGACTTAGGATATTTTCAGTCAGGAAATCACGTGTGCTAATGAGACTGCTGACTCCCTGATGGAGTCCTGCCCCCCTGCTGGATTGCCCAGTGCTGCCTCTCATCAAGAGCAGAGCACCGGGCAGCAGTAGTAAGACTTCCTCTTGCTACAACCCAAGTCAGGACACAGAGCAATTGACCAACAAAGACTGACTAGTTTTGCTTGTGCTGTTGGCTTCATGTGTTGATTTTCCAATCACCTCCTGTTAATACTGAAGAGAAAAAAAGCTTCCTTGTCATAAAAGCACATGAGGACATATAACAACAATGTTTGAAATTCCTGTTGCATGCCATGATTTTATATCTTTTAAAGCAGAATTGTCTGTTTCCTGTACTTATTTTACAGGGTCCAGATAGATTCCAGGTTTTGTATGGATTTACTTTTTTATATGTGTGTGTGGTATATGCATGTACATGTATGAGAATTTAGTGGATGGGTGTGCCCACTCGTGTACCTGTGGAGGCCAGAGGTAGATACTGTGTATCCTCCTCCGTCTCTCTCCACCTCTTCTGAGCCTGAATCTCTCATTGAACCTGGGATTCTGATTGTCTTTACTGGTTGACCAGAAAGTCCCTGGGATCTTCTTGTGTCTACTTTCCAGCCCTGGGATTACAAGCATGCACTACCACGCCCTGCTCTATATGTGGTGCTTATGAGGTGATAGCTATATCTATTGAGGCTCGTGAGGCCAAAAATATATAGTGAAGCAAAGCCCCCCCACCTTATGGCACTGGAACCACAATGTGAGAGTGGGAATGGCTGGAAATCTAAGTATTCCATTCTAGGAGCTGTCCCCGTAATCTCACTTTCTTCTGCAAGGCCCTACTTCCGAAAGCTCCTGCCTTCTCCCACCAGTATTACCCCTGTGGACCAGCTCTTTAAGGAATGCATCTTTGGGGACATTCCAAAAATAATTAGCAATAATTAAATAATATTAATATAATCAGCAATAATTAAAAGTGATTTGTCCCCAATTTTTAAGCTTTCCAAGTTCACTGTCACCATCTTAGCACACATCTGGACTATGTGCTAAGAGAAGCTGCTATACAGAGGAACCTCCAAGTACAGCCCCTGGCCTAAAAGCCTGTGTGCCCTGCAAGGAGAGCCCAGCATGGCCTCTTGCCTTAGCTCATAAAGCTGAGCATGACTTGAGACTATAGCCAGACTATGGGCTGAGCCATATGGGAAAGGATTTAGATGAAGTGGCTCCAGAGTCTATTCCCATGACCATTTGAAAGAAACCATTCTCTTTGATTTTATTTTAATCACACGCCAAGCAGTCTGGTCCAAGACCGCTACATAGTGTAGAGGCTATCTGGCAGCTGAAGGGCCTTACGGTGGCTCAAGGTGAGGCTTCTCCTCTGTCCTTGGCCTCAGGAAGGTTAGCTTTCTTTTTCTTTGTTGCCCCTTTAATGCAAATGACATGAAATAATGGAATTTGAAAGTTTTGTTTGTGTGGGGGCTGGAATCAGTTTCTCCTGAGGTTCAAGACAACCAGGGGCTAGAGATGAAAGTAGGCCTCAACAGGCCTGGCCCCTTCTCTACTTTTGTTTCCCATCCCTAGGCTGGTGGGACTTCATGTTGGTCTGGTATGTGTAACACATACCACAGGTAACAGCTACTTAGTAGTCTTATACCATTAACAAAATGCTAGCTTGTGTTGTACCCTCTCAGGTGCATTTAAGAGAGTCTTTATAAAAGATTAAGGAATATGCATGTGTGCGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTATGTATTTGCGGATACTCAGACCAGTGCATGTCACACAGACAGAAAGTAAGCACTTGCTGGGGTCTGGGAATCTAATGCTTCAGGATTCCAGCAGATGCCTCCAAGCCAGGTTTTACTCTTATTGTCTAATTCCCAGCTCTTCTGTTTGTATGTTTGATTTAGTTTGGTTTGTTCTTTGGGACAGGGTCTCACTAGCTAGGAACTTGTTCTGATCCTTCTGCCTCCTGCTCTTTTGAGTGCTTGTATTTGCCACTCTTTGGGTCCTTTGTGAAAATGACTGTTCTTCCTGCTGCCCCATCACAGTGCTCTCTGTGAAAGACTTCTCACCTCATGGTTTGTTTTTGGTTGGTCAATCCTTTTTGGCTCCTGCCTCAGGAGCTTTGCCATAAAATTGACTTGATCACAAGTCCCTGCCATCTTTAATTCTATCATGATCCTAACATTCGCGTAGGCACCCTCCTAGGGCACGCTCACACTGCGCCTTCTTTACAGAGCATTTGTTCCATTGTTGCTGAACTGGCATTCGGTATGGAGACGCTGGGACAGAAGGGCAGCTGACCTTCTCTTGTTACTTAGTGCCACCTTTGTCCTCTGTAGGCCCTCGTTAGCACTCCCCAGCTTTTCAAACCTCTTCTCTTTCTTCTTCCTAAATGGCATTCCTTTTCAGAGAGTTCTGCCCCTGGCATAATGTCTGATGGCTGACATGCCAAATGGCTGCCTCTCAAAGCTCTTTTATTACTTGCTGAGCCCTCCCATGCGTTGGTAGTTGCTGCAAAGTCCATTTCTTTGTGAAATCTTAGAAGTAAGCATAAGCCCCATGATATAACTCTGGACATATGAGAAATGGTCTGCAGAAACTGAATAAAGGCGTCTGTCTGTCTCATTATGGTGCCCTTCCATGTATCCCTCCTTTAGAGCTGAGGATGCCAGTCTCACCCATACATCCCACTGTCAGAGCTGAGGATGCCAGTGTCCCCTGTACATCCCACTGTCAGAGCTGAGGATGCCAGTGTCCCCTGTACATCCCACTGTCAGAGCTGAGGATGCCAGTGTCCCCTGTACATCCCACTGTCAGAGCTGAGGATGCCAGTGTCCCCTGTACATCCCACTGTCAGAGCTGAGGCTACCCGTGCTGAGCATTGCTTCTCTCTACCTTTCTCTGGGCTCCACTTTTCCTACTGTGGTTCCCTACAAGCTGCAGAATCCCAGCTTGAGGGATTGAGTTTTGATACAGTCATTCATTACAGTTTGCTTGGTAACTTATCAGCAGGCTACCCCTGCTGATAAATTTTCTCTAGTCCCATCCCTTCTCTCTGCAACTGTACTCTGGGAAAGTATGTGGATAGTTAAACTCACTGAGTCTATTTAAAGTGTGGAGATAAGGCAAGGGCAGTTCTCCCCTGAGAGGAGGAAATAGGAGATATGATGTGAAGTGACCTTTCTTAGATTTGTCCCTACACAGTACACCTCTGGCTTAGCCCTTGCTGTGAGCTCCCACTGAGCCAGTAGCCTCCATCCTGACCACAGGAATTCCCCTCAGTGCAAACTATCCAATTCTTACCCCTTCCTCCTCTTTGTTTTCCCTAACCAATCCAAACATGCCACATAGGCATTGATTTTGGAACCTTGCTCCTCTTGCCTTCTGTATGTCACCTGCCTACCAGCATGTTCTTCAAGTCTCACCTGTACAAGATGCCTTAAAACTCCCTTTGTCTATGGCTGCTGCTCTTATCTAGGTTTTTCACTCATCAAAATGTGTTCTCCAGTGCTAGTAGTGCTGACGTTGGGAAGTTTTTTAAATATATAATCACTGGTCTTGCCACACACACCCTGAGTTAGACTATGCACCTCTCCATCTCTTATAACTCTTCTGATAACCTAGGACGTGCCCATTAACTTAGATTAGAACCTCCTCACTGTGGTCCCACTAACTCCAAGGCCCTTTTGCTTCCAGCCTGCATCCCTTGCTTAGCATGCACCAGCCTATGGCTGCCTTTTCTTCCTGTCCTATAGCACTGATTCCCACCTTGCGACTTTGCATCAGATGTAGATGTGCCAGTAGCCTCCATCCTGGCCACAGGAATTCCCCTCAGTACAAACTATCCACTTCTTACCCCTTCCTTCTCTTCTCTGTTTCCCTAACCAATCCAAATGTAGGCGTGGCCCAGGATGAGAGCTGCCAGTTTGTATGACATGGCTTCTTCTTGGTGGTGAGCTTTCAGTAAGCTCTTAGTGGACCTTTTAAGCCACAGGGAACAGTCCTTTAGAGCCTATGAAAATAAGTGACCCTGCTTCTTTGTGGTTAGGTGACATTGTAGATTCTAAAGGAGGAAGCTTGGTTACTGAAGCCTAATAAGATCTATGGTCTGTAAAATAGAGAGCATCTCCAGTTAGTGATAGCCACCTGTACAACTTGGGTCAGGGGAGTTAGGGTTGTTATAAGCTACTGCCTTTCAGTTAATTTCTTAGGCTAGATAATGGGTATAGCCACTGAATAGTCAAATGAGACCCAAATACTCTATGTTAACATTAGACCTGTATGCAGTAACCTGCCATTATATGGCCCTGGTCAGAGAATAGTCTGCAGACATATATTGTCTTCCTGCTTGCCCAGAAAGGGCTTCATCTGGAAGAACACTCCGTTTGCTCTCTGTCCCTATCCCCCATCTCTAAGTAGAGAGAAGTTGAGTGGCAGTGACTACTCCCTGCAAGAAGCTCTCCTCCCTTTCTGAGCAGCAATGAAATGTGGAATGGCAGCAGGACCCTCTTCTTCATCCAGTTCTTAGAGACTTTGTTCAAACCATAACCTAGTATGAGTCTATCTATGGTTAGTGCTTATCACACTGAAGGTCTGTAACGGTAGGTGGAGGGTTAGTTAGTCTAGGTGTCCCTCGGCTCTCAAGCACCTGACTCAGGGCCTGGCCCATTTCCCAGGCATCATGTGTGTTTGTAATAATGACTGAGCTCAGAACCAAGGATGCCTTGCTGACTGGGCTGCAGTGCATTTACTGAGCAGTCTCATCATCTCCAGGCAGGCTATAGGTGCCTTGCTGTGTGGAAATCACAAAGGCATGCCTTCTACAAAGTCTGTGACATGGGTGTCAATCTAGGGTGTGTTGAAGTGGCTGGGTCTCCCTGGGCACAACCGTGAATATTGAGCTTGTTCAAATACCAGAATGGGAGGTAAAGAATGCCTGGTTTGAACCCCAGATCTATCTCTTTATAGCTCGTGACCTTGGAAAAGCACTTCTCAATGAACTTCAGTTTCATTCTCTGTAATATTTTAAAATAATAAAATCTCCCCAGTGGGGCTATTGAATAGATTATGTAAATGAAGCAGTTGGCCCTGGGCTTGGTACATGTTAAGACTGCAGTATCTTAGCTCTTGGCACTCCAGACACAGCATAACTCCTTAACTCCTTACTATATGTGTAGAATTCAATTATGAATGTTTTTCTTTTGATGATTCTGTTCAGCAGGCAGCAAGCATTTATCTAGGCTCCATACTGGGAGTCTCAGCAAGGTAAAATGACCCTTTTTTTCCTTTTTATCTTTTGTGATGCTAGGTACTGAACTCAGAACTTTGCCCAGGCTAGGCCAGTACACTCTTATAGAGCTACCTCTCTAGACCCACCTGTTTCTTAGGAGAGTCTGCTGTGCGGCTCATCCTAGAGTAAAAACAATGACATTAACCTAAGTTAACACATGCCTGTGGGCCCCAGTGTACACAACCTCATGTTGAGTCAATTTGAGTTATTTTCACAACGGCAGTCCTCCCTGGGAGAGGCCATTATGGAATGATGTCTGTATCTCCAAATGCATACGTTACAAGTTAACCCCAAATGCAATATTAGCATTAGAAAGTAGGGCTTTGGGGAGAGAGTAGGCCATAGAGATGGAACACTCATGAATGGGACTAATTCCATTAAATTAGGCCTCAAAACTCCTTCACACTCCTTAAACCATAAGATTACAAGAAGTCATAAAGCCGACATATGCTGTGGTAAACACGGTCCTTTCTAGACCCCAGCCACATTGGGACTGTGGTACCAGGCTTTCCTTTTCTATTCTTTCTGAGTGAGAAAAATACAAAAATACACTCCTCCTGTTCATAAGCCACTTGGTCTAAGGTGCTCTGCTACAGCTGATTTGATGGGACTGATGCTGAGGGACCACAGTGAAAAGGTAGGCGACTGTGAGCAAGAAGGCACACTGATCTGAGAGCTAGGGCTCTCTTCTCTATAAGAAATAGCCGAGATGTGTTGATTTGTTTATGTCTTATAAATCTTATTATATAGAATATTTTGCTCTTTTAAATGTGTAATAATACTTGATAAAACCTTTACTATCTATTATTTCCACTTTGATAAACTGAATGAGATTCTTAGATATCTTTATAATTAAATGTTTGCATTTTTATTAAAAGAAAAAAAGAAAGAAAGAAATAGCCAAGAGAGGGGAGCCCTTGTGTTCCGTGAATGGGAGTCAAAGCAAACTCTTTCTTCTTTTTAAGTTGCTCTTGGTCATGGTGTTTCAACACAACAACAGAAAAGTAACCAGTACATCTGCTAACAGAGAAGCATCCCTAGGATGTCCAACAAAAGGCAGGGACAGTCATGGCGAAGGCCTTGTTCTGCCCTTAGCTACTAGGCTGAGAAAATGGTGGGCAATGAGCACTGGGAGTACAGTGCTGTGCATTGACTGGGTGGGTAGGGTGGGGATCTTTTCTCTTGAGGAATTGTAGAGCTGTATAAAATGGTTATCTGACCAGGAGGCTTGCTACTAGAGGCAAAGCCTCACAGGGACATATGCCTGAAATCTTTAACCTGGAGAGGCCCTGTGGGAAGATCCTGGCAGTGATAAGCACTTGCATGTACTAAGCATAAAATACAGCAAAATAACATCTCCGGTAAGATTGTCTACATATGGAAAGATGTTCAGATAGCAAAATGCCACGTCTCCCTCCACCTCTCACTGTGACCACTCTACTGTCTGTTTCAGTGGGCCTTTAAAATACCTCTCTGCTGCCCACTAAACAAGCACATGTCAATATTTATTGAGCACCCACTGTAAAGCAAGTAGCATGTATACATCCTAGGGAGAAGCTTGTGCCAAGTGTGCAGGGTTGGTTCATGTGTTGGAAGGCCATCTTTTGGGGGTGGAGCCAGGTGTGAGCTCTTGCTCCTGAAGGAACAGCACCTCACAGTAACTGTGAGTACCATTCCTCACTCACTCCTTCTGAGCTACCATGCTGCTCTCCGCATTGCTTATAGTTTACAAGACAAGGATCTACTTCTCCCTACCCCGCAGGCAAGTGAGGGCAGGTTAAATGGGACATAGACTCCTAAGGCATAGAGAACTGTAAGGTGTCCAGTTAATGAGACCCCTGTGCATTGTGCAGCAAGTTGATTTGTCCAATATGGAAACTTTTTGTCCTTCTCCTGTGATTTAGAGGCCAGGAAGAAAGCTACCCACCATTTTCCTCTTCCTTTTACCAAATTCTTTCTCAAAGACAGTTGGTCCTTCCCATTCATATTAGGTCAGGGAGCTCAAGTGGACAAACTTGAGTAAACACATGGGTTCTGCATCAGAGCCTGCCCTACGCTTCATACACATGATACAATTGTGGTTCTATGCCCATCATGAGGCCCAGCATCTCAGATGCCAGAGATTGCTATTGAGACAGGGGACAGATATTAGCAAGCTGCTATGAAATCTTGACTTTGAATTTTATCTGAGCCGTATGTTCCCAGAAAAGAAAAATATCAGCTCTCTGCCTACTACTAAGAGAAAAATAGTGAACAGAGGAGGTAACCCCTGTGAAAGATGGTTGCCTGGTGTGGGGAGAGTCACAGCTTTCCCCCATCCTTTCATTCTGTCCCTTTAAAAGGGCTTTCAATCTTCAGGAATGGCTTCTTCCTGTCTGTGAATATTTTTGTTATTTGTACAAGTTTCTTGGAGATAGCATCACCCCATTTTGGTCTTCTATATAAATATACATATTTCTAAAGTTAGAAACTTATGATGTTTTCCCACAAAGCACATTCATTTATCATTTCTCTTTCCTCAGTAAATTTGGGATTGTGTTTAAAGTGTCTCTGTTTCCAATGCATGGAGCTCTACTCCTAAGCTAGTTTGTGACAGGGGGTGTGCCTGCTGTGACCCCCATGAGACAGATCTGCCTCTCTTCTGGGAGTGCAGGGGAAGACATGGCGTGTTGATCACCCACGCAGCGTGGAGATTCTAACTGCTGGGAGGAGTATGCTCCTCTCCAGAACCAAAAGGTCCAGGGGATAGGCCTTGGAAGCGTGGCTGCTTTCTCGTTTGGTTCTGGCTGAGAAGTAACTCTGACCGTTCTGGGAGTCCGGGCATTTTGGATGAAACCATTCATTACATCCTTTGCTCCTATCTTAAAGAGTGTATGTGGGAACACCTAAGCACAATGACACAGGCCAGGCTGAAGTGAAGTGACAGTAAGATAGTGGCTCTGAGGATATCAGCCCCAGGCTAGCTAGTAAGTAGCAAGGTTAGCTGCTACGAGGGCAGACGGCTGACAGCTCACAGTCACTAGTCCATGAACCCAGAAGTTTCATTGAATAGTAGATACTATGTCACATTGATTTTACTACCCACGATACCCATACACATGACCAAAAGACAAAAACAGTCTAGTGTTCTAAATATGCTAAGGCAAAGTAAATAGACTTGTTTATCGTAAAACTGAGAGTACTCAGCCACAACCACACACAGATTCAGAGGTCAGCAGGAAGATAGTTCCTCTGTAGATACTGAACCTGTGTATTTGTGGCTGCTCCTCCTTGCAAAACAGTGCTAACTTGACTGGACTTAAGATGGCCAGCTGGCTGTCTTATCGTTAATCTGTTTAGGAGAGATAGAGAATGAAGCTAGATCCAAAGAGGTGACATCAGGAGCAAGATACCTTCTTCCCCACTCTGCTAAATCTCAAAGTGGAAGAAGTCTTTAAGCCAAAGAGGCCAGCCAGGTGGCCTTGAGAATCTAAGGAAGTGTTGGTGTGTGGGTGTCAGCTCACTGAGACCAACTTCATACTTCTGAGTCCTGGCACAGAAGGATAGTAGACCCTTTTAAGTTTCTCTCTTGTCATTGGAGCAGAGTCCACCATGGTTACCCCAGCTACCAGCAAGGCTGAGAGAAGGCAGGTTTGGGAGCAGTATACACCATGAGCAGTACACTAATAAGAGGGAGAACAATTGTATTTAGGAAATGAATAGTATAGTGTATATACTATACTATTCTACTCTCATAGCTTGGAAGTGAAGAGTTGACATCTCAGGGCTAGCTCAATCAATGCTGTGACCCACTGGGTGAAAACCTGATCTTACTGCACAAAGCCATATGGAAATATAAGTTCAAGGTGCCTGTGAGACTTCTTAGGGGAGAGAGCACAAATTAGAGCTCCCAAGCTGAAGATAGGATCTTCTTCTCAGAAAGGGTGCGTGAGGCAGGACGAACAGGACAGGTGGATGCTCAGGGACAAGAGTATGTGCATGTACAGGGACTAGAGTTGAGCGTGGAGGCAGAGCAGGGGAGAGTACCAGGACAGAAAGGTTCTTGCCAGTTCTAGAAGGAGCCCAGGCTTTATGATGTGGTTGCAGGAAGCCATGACTGAGAAAGATCATGGCACAGGACACTGGGTGCTTTAAATGATGGATCACCTGTGGCTAGCTGAGGACCTCAGGAACTCAAGCAGTGCAGCAATCTAGAGGCAGGAACTGATGCAGAGGCCATGGAGGAGTGGTGCTTACTGACTTGCTCCTCATGGCTTGTGCAGACTGCTTTATTAAAGAACCCAGGACCACCAGCCCAGGAGCGGCCCTACCCACAATGGGCTAGGCCTTTTGTCATCAATCCCTAATAAATAAAATGCCCTACACTTTTGTCTACTTACAGCTCAATCTTCTGGAGTCATTTTCTTAATTAAACTTCCCTCCTCTCAGAAGACTATAGTCTTTGTCTAGTTGACATAAAACTAGCACAGACAGACACACATATACATAATTCCCTACACATAGACATGTGCAAACCCATCTTTCCATGTTTTCTCAGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACGCAAGAGTTTGGCTCTTGGATTCTTTAAGAAGTGGCTTCAGCCATTTGCTGGGCTGCAGCCCCAGATACTTGCTTACCATGGACACTAATGATATCTAGAGAAAGCATTCTCCAAGGCATGACTCAAGTTATTTGAGATGTGAAGGATGCCTAAGTTATGCAGTCTCCTGGCATGGCAGCAACAGTGGCAGAGATGATGGTGGTCTTGACTTTCTGTCTCTTGAAAGGCATAAGGATCCCTATCCTGACAAGACCCTTCAACTAGGATCCGTGGGTTGAATCCACTTGTCTGCTTGCAGTCCTGCAGTGGCCCTCAGGCTTGGTATGAGGGCAGCATGTACTAGAAGGGTACTGCTAGTTGTATTTATTCAGACATATAAATTAAATGATAAAACAATGTCTCCCCACTCTGTCCTTCTGGTTTCTTCTCATTATTGGCCAGCTGAAGTATTTTTCATCTTCCTTTAACCATGTATTTATGTGCCATGCTGGGTCCAACTTTCGCTGTATGAAGCCTGGCAGTTCCAATGCCCCATGGTGACTGAGCTCAAACTTATTTAAGTAGATGGTGCTGATAAGGATGTGGCCATTAGCCCCAGCACAGGTGTTCGGGATCTGGTGCCAAGGAGTTATTTGCACACTGTTTTGAGAGCTCTGGGTGAAGGGATGCCGCAGATGTGTCCTGCTTCTTCTGATCCTTGGTGGCTTTAAAGAGTTCCTATCAATGCCAGCTAGTGAGAATGTTTTCTCCTTTCCTCATTGCTGCTGGGATTCAGCCATGAGTTACAGCTCCTTCTTCCATTAATTATCTTGGTTTGCCATATGTCTGCGTCATTGACCGTGTCTCTGGGCTGTTTTGGTGCCCCAGGAGGTAGTAGTTAGTGTCGTCTCGAACAGAAGAACATGTGCTCAGGTTGAGACTCTGAAGGTGCTGAGGGCTGTGAGCCGAAGGCCAAGAGCTGCCAAGAGGGAAGAAGTACTCACTGCAGGCTTCCAGTGGACCACCCCTTTTCTGTGGTCTTTCTGTAGGACAAGGCAGCTAACTCCTCATAGTTTTCTCTTGGCCAATGTTGGGTGCTGAGGATACAATATAGATTGTGCCCAGTCCAGAGGACTATGCTGTTGGTCCTGCTCTCTGTTGTATGATCGTGAGGGATGACTGAGGGCATGGAGTCTTTCGGTGTACTCTTATTAAAGAGATAATAAAATGAGATCCAGCCCAAGAAACTGATAAGAGACTAGGGGAGAGGCTGTGTGGTGGTCCAACCACCTGCTGCCCTTTTGGCTCAGTTTTGGGTTGGAGTAATTAATTACCTGAAGCTCATGTCCACCAGAAGCACAGGAACCTGGGTGTGGCCTTATCCTCTGCTTGGCCATCCATGGCTGTGTTAAGTGTAGTACCTTGCAGACAGCTTTCCATCTTTCCTGAGCCCCACACTCCCTGAGACTTGGGTGCTAAGATCCTTCAGATGCTGTGGGGAGTGATGGCTAGGGTAAATAAACACTGATGCTTATCTGCACACCAAGTATTGCTGTTCTCCCCAGATGCTATAAGTCTGCTTAGAGAACTTAGAGGTGGACTGTAACACAAAACCAATTTGGGGTCATAAAGGCCTGGGGAGTGACGCAGGCTGCATCTTCCTTGAGGGTCTGTGAGCAAGAGCAATATCTGAGACTTTCTTGAAAGTTGGGAAGGAGAGGATTTAAGCTTGTGGGGATGGATTTTATATAGACAGTGGAGAGGAAGCTGAAGAAGGGTGAGAAGGAAGGAGAGGTGAGGAATATGGAACGAGTGGAGTGATTGGAAGATCCCAGATGACATGACATATCAAAATATCCATCCATGCTGCAGAGCGGACCATGAGATGAAGGTGAAGAAAGAGACAGGGTCTCCACAGGAAGCTGCTCTCCAGCAGCAATAGATCTGCCAAGGATAGGTCACTAGCATCATTCTGGAACATCTGAGGTGAGCAGAAGTACTGAACATAGGACCTGATGTTGTGAATAATTTATGCAGTCCCATGGATTAAGGTTTTCTATTAGACTCTCTGTGCTGCTAATAATTTAGCTGACAGACATGTTAGATGCAGCATTGGGAGACATAGAATATCCATCTCAGGGGGTAATGACACTGTGAAAGCCATATTATTTCTGCGACAGAGAACAATTTTAAGCCTGTGCTAATAGATTAAACTGCTGGAGTGATCATTTTGAACAAAGAGAATGGTTAGAGCTGTACAAGCTAACCTTTGTCTGCCTCGGATGGCTAAAGAGCAATAATTCTACCCTATCAATCTGGGGCATGTGATATCGTTAGTCACTGCCACGCTCGCCAGCTGAGGAAGAACGAGCTCTAGGTTCCACTCATGCACACCGGGTCCAGCGTTTGCTCTTTGTGAGCTGCTTGACCTTAGTTGAGTCACTGGACCCTAGGGGCTTCACGATGCCATTTGTGAAGAGGGAACAGGTAGTATGTATGAGGAACTGGAGTGAGGCTTGAGGGAGTGTTCAGTAACCACAGCAGGAAACAGCTGTTGACTTCTGTGGGAGCAGGGTAGGCAGTGCATGCCTACAGAAATGGCAGAAAAGCAGAATGAGCAGGTCACACTTAGAATGCTTGAGGAGCGCACATATCCCAAAGGCTCATAAGCCCCTCTGTAAAGCAGCTCCTTGCCTCTGGCTCATCCTCACTGTGGAGCTCCTAAGTATGTGGAGAAGGTGGACTTGGGGAGCACCAAGTTAGCTTGACCTGCTTAACCTAACACGTGCTTATGCTAGGACTTCAGTGAAATGCACAGCTAGCATCGTCTGTCACCTTTCCTGATGATCCATTGTGATGTTCCATGCATAAGAATCAATAGACAGACGAATGTAGTACAGGTTTTGGTGACAAGACCAACCTGGGGCTAGATATTAAAGACAAAAAACAAATGGGAAAAGGGTTCTCTTAAATGGACTTCAGCACCTAGAAAAGGTAGCAGACAAAATAGAAATGTTCAGCAGGATGGTAAGAGAGCGAGCGTAGATGGGCGGAGGCCTGGACTTCTCAGAAATGTCTGCCTTGCTTTATGAAATAAAGGCTTGGTCTGTGTGTGAGCTGCTAAGGCACTTAGATCTGAAGAGCTCATTGCAAACATCGCTTTAAACCTCATCTGCCCTTCCCTGCAGCCTTCACCCTGCCATACTGAGTACAGCCGGGTATATCACATGAGCTCATTGTGGCTCTCTCCTTCTGCTCACCACATGGTACCACCACACTTACCTGGCATGCACTGTAGTTTGTGGACATGTTTCCTGAGGACCTCAATGTTTATCACCCACCCTCCTTCCTTCCTCCTCATAGTTTGCTATCAGGTGAGGGAGGAGGTTTGCAGCATCCTATTCTCCCGTTAGGTACTGTCTTTCAACGAAAGAAATTAATATTTACCTCCACAGCCTTGGTTTTGGTGCATTTTTGCAGATAAATGAAATGGAAATAAATAGTAAAAGGAAATAAATGTCTTGGGTTGTCTTGGTTTATACATACAGAAATGGCTAGATAAGTTAGCAGTTTTCTCTCAGAATAGCTTTACAGCTACTGAATTCTCTCTGTCATAATCTTCTTTTAGCATCTAACATCAAGATGCCCAGATTGCACCCACAGCTGTCTCCCCCTCTAATCTCTCCCCCCACAGTCTCTATGAGCTGAACCTTCCCTACTTAGTCTTTCTAAGGTAGGTATGCTGGTCCTTCTTTTACTTTGGGCAAGCCAAAGATTGTAGAGCATCTTGCCCAGGCTTCCTGGAAGTGCTGGAACTGACATTCATACCTGCTCAGTGCATCCCAGAGAATGTCACCCTTGTCACTCAGGCCCTGAAAGGATAGCTACTCCAAATCTCCTAGGGACCAGTGGACTGTCCACCAGCCCCTTATCTGTTTTTCAGCCCATCCCTTTGTTTTACAATCTATGTTCTTAGTTCTTCCTAAATTTGTCTCCTATTCCTCTTCTCTGGTTAAAGATGATTTTATTATTACAAATTGCCAACAGCCCAGAGCTGATTGATAGTCAGGGACATGATACGTTGGCATTGGTAGGAATTTGGACTCTGCAGTCTCCAAGCAATCAAAGTCCTGGCTATTGAAATCAGCTGGTTTTCTCTACTATCAATGTTCCCTGACCTTCCCTGCCCCAGCACTGTGGCAGCATGGATCTATTGGCAGGCCTCCAAAGAATTGCCAGGCATCTGCATTGATGGACAGCCCCTGGGGACTGTAGCATTTGAAGTGCGACTCCCAGAGTAGCAAAAACAAAGAAACCAGGAAGAACCTAGCCACTTTTTCAGTGTCAAATGGACCAGGTATATATCTTTAGGAGTCTCCTAATCTATGCTGCATGCTTCTGCATTTCATAACCCCATGGTACCTTTGTGACTCCACACCTTGGAGGTTCCATTTGCAACATGGGAAAGACCTGACCTTGTCACTCTGTGTCATGGAGTCTCATTCTCCTCTTCCATGAAGAGGGGCGAGACAATATAGCATCGATGAGAGGACTGCATGCGGCTCCCAATGCCCATTTGTAATGTTGACATTATTGTTGGACCTATGTCACCTTTCACTTTCCCTCCTAG
Seq C2 exon
GTCACCGATGAGGAGCCCAGTTCCAACCACACAGTCATGATTCAGGAGACTCTCCAGCAGGCCTCCGTGGAGCTGGCCGAGCAGCACCATCTGGTGGTGTCCTCTGACGACGTGGAGGGCATAGAGACAGTGACGGTGTACACACAGGGTGGGGAGGCCTCAGAGTTCATCGTATACGTGCAAGAGGCTGTACAGCCCGTGGAGGAGCAGGTTGGGGAGCAGCCAGCCCCAGAACTCTAGAATCCCTGCCTCCTGTGGCAGCCAGCCTTGGTGGCCCTGGAGACCACCTAACCCACCAGACCCATCTGTGCTCTTCTTGTCTACTGGCCCAGATAGAGTTCTCTGTAGTGTCCTTTGTGTGGTCAAAGCCAGCACACCACCAGCAATACAGAATCCTAGTCCTCAGTACAAATCACATCCTGACCCAGGACCCTCTGTTTCCAGGAGACCTTCCCATCAGTTCTCCTGTCCTACGCCTTCCTTGCTTCAAGATCCGGAGACTCCTCTCCCCATCTGCATCATCTCTGATTATAACCCCAGCCCTTTGCATCCCTACTACCTGGTGCTCACCTTCTGCAGGGGCCCACTGTGCTGTCTGTGAGAGGACGACAGATATCACACAGCAAGTGGCCTTATGTCTTTTGAGTTAACCACTGGGTAGGGTGGGGCAGGGCCTTCCAAGCATTCTCCACAGAGCCCTGCCCTCCTCAGTGCAAGGACACTGGGAACAAATGAGTGACCCATAGTCCTCTATCACAAGGGCCCAGCTTGGAATTCTTTTTGCTTTTGAAATAAATGCATTTTCTCACCCCCCCCCCCATTTA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000022335-Zfat:NM_198644:15
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.152 A=NA C2=0.399
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: