MmuINT0179689 @ mm10
Intron Retention
Gene
ENSMUSG00000054893 | Zfp667
Description
zinc finger protein 667 [Source:MGI Symbol;Acc:MGI:2442757]
Coordinates
chr7:6293849-6307883:+
Coord C1 exon
chr7:6293849-6293941
Coord A exon
chr7:6293942-6304587
Coord C2 exon
chr7:6304588-6307883
Length
10646 bp
Sequences
Splice sites
5' ss Seq
CTGGTGAGT
5' ss Score
10.1
3' ss Seq
AACTTCTTGGTGTTTTTCAGAAT
3' ss Score
8.85
Exon sequences
Seq C1 exon
GTCTTGCCTGCCGGAGGCCAAATATCATCGCCTTGTTGGAGAAAGGGAAAGCACCATGGGTGATAGAGCCATCAAGAAGGCGCTGGGGTCCTG
Seq A exon
GTGAGTGACTGAGAACCAAGGTCTACGTCTTGTCATTCAAGCTGCGAATGACAGCCAAAGTACCGCATACACTGGGCTATTGGTCACAGCAGAAATTTGTCATACACAACCCTAAGAGCTGGAAACTCTAAGAGGAGGACTCTAGCAGATATAGTATCTAATGATGAGCCAGGCTTATAGATGTTGCGTTGCCTTTTTCCTGTGTTGTCATAGGATAGGAGGGTAAGGGAACACTTCAACCCCCCCCCCCCAAACCTGATTGAGTCCCGAGGGCCCTCACCATGCAGCCTAGTACTCCTTGAAATAGTTATAATAGTCAGATATCTCCTGTGGTTGATGGAGTTCTTTACTGGCTGTTCTGGGGACTTCCTGGAAGAGGTTCCTATGGTCTTCTCCCAGCAGCCAATAAGTTCATGATTCATAGGCAGTTGCCATGGGAGTGCTCCCTCTCCCTCCTCCTCCCCCTCCAATCGTCTCTTCTTATCTCTTACTCTCATTTTAAAAGAAACTTCTCTGCAGGTTTGTTTGTTTGTTTGTTTTTAAAACCCCTTCTTCCCGTTAATTTCCCAAATCACTCTTGGATACCTTGAACCATTTCCTATCTAACACTCTTCTTCGTGCCTCAAGGCCTGATCCTGTTCTCTCAACCCTTCCTCCCATTAAACATAAGTTCACAGTGGCTGATTAAGTGCCAGAGCTTCTTTTCCTGAAACAACCGTACCTGCCCTGTGTTTGTTTTGCACAATCAGGAGGGGGTGTCCTCTTTGAAGTGTTGCTTGAGGGCTCCCCACTACACATGGAAAAGCTTCAGGCCTGTGCAAAGAGGTCAGGTCACAGTGTGAGTCCTTAGGGTGAGAATAACAAATGTCCATTTAGTCTCTACTTGGTGGTGTTGTGGGGGGTCTGCTTAAATCCAACATGAACTCAAACACTAGTCAATGTGGATGACAAAAATGTATTGTAATCAAGCTGCCACTGATCCATCAGGGCCACAGAACAGGCTCAGGCGCTGAACTACTACTCTGAAGAGAAATTGCACAGCATATTTAAAGGACAAAACCATAAAGAGAGGGGGAACTGGCTGGGCTGTAGCATTGTCTAATCATACTTTGACAGAAGGGGTTTGTAGAAAGAATCTCTTATAAGCACTCACCCCATGTCAATAAAAAAGCTGAGGCAGGAAATAGGTGGGACACTGGCAGGAAGGCAGAGGATTCTGGGAAATAGTAAGAGTATAAGATAAGTGGGGGGAGCTCTGCGATATGAGACGGGAGACAGAACAAGGAGATAGAGGTAAACTAGCAGGTATCGGAACTTGGAGAGACACTGAGGGAGATGCTGAGGAGATGAGAAGGAAGAAGCTGGCCAGGACTGAAGGAGAGGTAACTAACCAAGTGGCACACATAGAATAGATTAAATAGTTAAATAAGTTAAGAGCTAGTCAGGGAATGAGCCAAAGCTTATAGCCTAGGCATTTAATAATGACTAATTAGTCTTAGAGTTGTCATTCCAGGAGACAGGGCCGGGAAAGGGAAACTTGGAATTTAAAAATGATTTCTATAGGGGTTGAGCAAGGGAGTTTTCACCGAACAGGTTAGGAGTAGCTTTGTGGTCCTGGGAACATGAACTTAGCTTGACCCTGCCAGCAAAAAGGAAACATTGTCCTTGAGATGTCTGGACCCAGACAACTGTTTCCTCATAAAAAAAAAAGCTGTTCAGCTGGGAAATCTCCAGCTCCTCTAGGGCCTGGGACCTTGACTTTGGTTTTTCCTATTAAATGGAGTCTGAAAACGAAATGGTAGTACTTAGAGTAGATTTATTTTGCTTGTTCCCAACAGTGTCAGGAATGCTTTGAGATACAGGTTCCTCCTGGCAATGCTATAGTGGGAGAATTGGGTCGCATTAGGTGAATGGGGCACTGCCATCCTGAGAGGCTCAGTGACTTGGTGGACCCAAAGTTGAAACTCAGCCTGCCTTTGTATCTTTGTATCCCCTCTAGCACCCCATGACTTTGTTTTCTCACTTCCGATCAGAAGAGGTATCAGCTGATCGATGGCGCTCACACTTGCATGACTTTGTCATTCCTTAAGAGGTGTTCATAGCTTCTCTAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTCTTCTTCCTTCTTCCTTCTTCTTCCTTCTTCCTTCTTCCTTCTTCCTTCTTCTTCCTTTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTAGCCTCAAACTCAGAAATCCGCCTTCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCCACCATACCCGGCTTCTCTAACTGTTCTTTTTGGCTCCCTTTCAGTTACTCGTTCCCTATGTGGATAAATTGTCCCAGTTAAACATTGTTTAGCTTTTTTAAACATTGTGTAGCTTTTAGTGACTGTGAGCTTCTAAGAGTATGTGTTTGTCACTGACAAATACTGCGTAAAAGAGAGAGGGTTATTTTGGTTTTTGGCTTCAGAGGGTTCATTTCAGGGTTGACTGGATCCATTGTGCTTAGGCCCAAGGTGGTGAAAATTGCTTTGCGACAGGATGGCTCAACTGTATAGTAGCCAGGAAGCAGAGATGACAGGAGAGGGCTGGAGACAAGGTGTTATCTTTTTAAGGCCTATCTCCAGTGACCTGCTTCTGCCATCTAGGCCCAACTTCTTGCTTTGCACCACCTCTCAATACTGCCAGCCTGTTAGGAATCCATCAAGATACTAATCTACCAATGAAAGCAGATTAACTCTCATTGTTTAATCCCCTGATAGTGATTCAACTTACAAGCCAAGGGCCAAGTCCTCAATACATGAACTGTTCTGGGGACATTTTCATGTTCAAATCCCAGATAGTTAAGTATACAAAGAAGCCAAAGCAGTACCAACCTGCCAGGCAAGGTATGCCCACTAGTGTAATGTTACCGTGAAGGTTTATGAAGTAACCAACCACTCTGATTGGATCTGAGTCCTGCTCCACAAGGGGAAATTCATGCCTCATATTACACTCTTGCTCAAAATCCCATGACTCAAAAGTCACAGGCCCTGGGGAAGGGGGACAGCTACTACTACTATTTATTTTGTTTTAAAAAGAAAAGATGTTGCTCGGGGTGGTGCACGCCTTTAGTCCTGGCACTTAGGAGACAGAGGCAGGTGGATCTCTGTGAGTGCAAGACCAGCCTGGTGAGTTCAGACCAACCAGAGTTACGTGTGAAACTCTGTCTCAAGAAAACCAGAAAACAAACAAACAACAACAATAAAAATAGAACAAAACTAAAAGCAAAAAAATGTTTTTCTCATTCTATCCTGAAGCATATTTTATTTATTTCTTGTTTTCTGTTTGGTTATAGGAAAGTTGGTCTTTTTAAAAACTTCTTTTTTTTCCATTCTCTCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTCACACACACATGTGCATGCATTGAGCATGTGTATGTGTGCATGTTTGCATGTGGGCACAGTGTGTAGGTGCATTTGGTGATCTGAGGTTGGTGTCAGGAACCATCCTCCATCAGTCTTCCATCTTTCTCACTGAGGCAGAGTCTGTCAGTCAAACCTAGAGCTCCACAGTTAGTCTTGCTAGCCAGCCTGCCCTGGGTATCCTGTCTACAAACCTGAGGCTGGAATTAGGCCACCAAGACAACTTTATATATATGCATATAGTATATTATATCTGAAGGGACTCTAGCCAGCCTGAGCATGGCAAACATGAATCCAACAGGCTTTGCCCTTCTCCCCCATTCCCTCTGCCTTGCTAAAAACCAGCTTACAAGATCCATTTCCTTATTTGGCCACTTCATCCTCCTGAGTCTGACTACCAAAGTCCAGCTATCAGAACTCCTCTATGGCTCACCTAATGCACATAGCAATTAAATTTGAACACCTCACCCTAACACAGGATTTTCCCTTTTACCTTAATAAACTGTCATTTGCCTATAGACCACATCTGTTTCCTCTCTATCCAGATACAGTCCTTTGTCCCTCTGGGACAAATACCTGTTCCCTTCCCCTTCGCCCTAGTCCTCCTGTCTGTCTCTTATTTCCTGCTTTTTGTCCCTCTGGCAAATAAGTCTCCTTTGTGCTGAGAACTTGCTCGGGAGGTGTTTTGTACCTTCAACAGTTCCTGCAGTTTAGCCTTCCCAATCCCCCACCCCCACGCCCTTGTATGTCCCCTTTTGCTTTTTGTTTGTTTTGTTTGTTGTAAACCACTGAGGGTTTTTTTTTTTAGTGTCGCCCGCTAGAATACTGACTGATCTTGTTGGCTTGAACTTGGGCAGGAGACGGTTAGTAGTGTCCGGCTTAAAGTGAGCCTTAGCTACTGGGACCCCCCTCAGCTGAGACTCTAGAGAGGAGATGATGCAAGGGGCTTATTTCCTAGTGGGCTGGGGTTATCCTGCACCCAGAACAGAGGCGACCCCTTCTCTTTCTTTCATACGCTTTTTATACAATTTTTGAGGGCAGATTATAGCAACAGCAACTAGGCACATAATGATTGGTGGTTCTGGTGACCTTGACATTAATTGGCTGGGCAGGGAAGGGGACTCAGGGACCTTCCCTAAGGCCCCGTGGGAAGTTCAAGTGAGGGCTCTCTCAGTTGCAGTGAATTCATGAGTGTAGGGAACACACTCCTCTCTGTCCTGACTCTTAACATTCAACCCCCTTCTCCACCGTGTTTCAGTCTTCTCTCTTAATTACCTTTCTGTCAATTGTGGTAAAATACGCTGATAAAAGCAACTTAAGGGAGAGAGGTGTCTTAGTCACTGTTCTGTTACTGCGAAGAGACACTATAATCAAGGCAGCTTTATAAAAGAAAGCATTTAATTGGAGGTTTGTTTACAGTTTTAGAGGGTTAGTTCATGATCATCATGGTAGAAAGCAAACAGGCATGGTACTGGAGCAGTAGCTGAGAGCTTTACCATCCTGATCTGTAGACACCAGGGGAGGGGTAGAGGGAGAGAGACAGACAGACAGACAGACACACACACACATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGAGAGACTGAGATTAGGCGCCTGGTGTATGCTTTGGAAATTTCAAAGCTGGCTCCTCCTCCAACAAAGCCACACCTACCCCAACAAGGCCATGCCTCCTATTCCCATTTCATTAACTGTTGTTTAAGCATTAAACACAAAAGGGCAGCTGTGACTGTCAAGTTATATTGTGTTCACCCAACATTCTTTTTACATAGTCCAGGACCTCTGCCTATGTAATAGAGTCACCCCCTGTAATCCAACACTGTTCTGGGGAGAGGTGTGTAAGAGATTGGTATTGGCTCAGGCCCCCCAAGACCAAGTTCTCAGCACAAAGATTTATTTGCCCAGAGGGACAAAGGGGAGGGAATAAGGAACAAAGACAGGGAGTTAGAGGATAAGGGAGAAGGGGAAGGGAACAAGGAATAGGGGTGTGTGTGTGTGGGGGGGGGTATTTGAAACCAGAGGGACAAAGGACTGCCTCTGGATAGAGAGGAGACAGCCATTGCACATAGGGAAATGATGGTTTATAAAGGTAAAATGGAAACCCTGTGTTAGGATGAGGTGTTTAATTAGATAGGTTAATTAGGTGAGGCAAAGGGGGCTTTTGATTGCTAGACTTCAATAGTTGATAGCTAGACCCTGATAGTCTCAGGAAGAGGATGTGGCCAAATAAGAGACTAGACCTTGCGGCCCAGATTTAGGAATGTAGTCTAAGGGTTTTTAGCAAGGCAGATGGAATGGGGGACAAGGGCAAGGCCTATCAGAGCCATTGTTTGCAAGCTAGCTAGAGTCTCTTCAAGGTAGACAAACATCTGCTCACCCCAGACAGGGAACCAATCACAGACCAACTCAAGGGTGTCACCAGAGTCCAACTTGATGAACCAATGGGTTTTATGGGAGTTACTTAACAGGAGTGTGGGTGAGGGGTTACTTACAGGAGCAGAAATGACTGAAAGACAGCTGCATCACCCAGGCCTACCCCAGCATGAGTGACAGCCTGCAGAAACTGGGAACCTGGAACATACCATGTATCCTGCCGGCAGCTCACCAGGTTGGAGTGTGTTCTTTCCAAGTGACTCTGATCTAAGCCTCCTCCAGGCTGCTCAGCTGGTGTCTGTTTCTTCCAGGCAGCTGGTTTGGTTTCAGTGTTCTTTGCCGCTCAGCTTCCTTTGTCTGAGAGGACCTTTCGACTTTTATTATTTACTCTCGCAGGGAGGGGGCCTGGTGAATCTGATCTGATTCAGGGACTTCCTGATGGTATCTTGAGGTATTTATCTTTTTACCCAAAGAGGTTCCAAACAGAGTGGAATGTTTCAATCTTGGAGGACACTGCTACACAACAGCACAAGAAACAGCTCACAAAGGCTGTATAACCGGAGCATTCTGTACAACTTGCCTCGTCTGTCTAACAGGCTGGGGAGTAACTCTGCAGGCAGCTCAGAGAGTCTGAGCCTCTTTTGTTTGAGAATGTCTTTCAGGAACCATTACTGACTGCTTGCATATGTTCAGGGAGAGAGAAGCCTAACGTATTTGTTCAGTTTCAGGGACTTCCAAAAACCTTTGATGTTTACTTTCCGATCTTAGCAAGCTTCTCTGCAGGATAATATGATTTTTATCTCTTCTTAGAATATCCTGTGCCTTAATGAGTTTCCTTGAATGGTGGACTGTCATCCTACGTCTTAATCATCTCCGCCTTTACAACATAACTATTTTATCCACCTGCTTTCCTACACCCTGCGTCTAAATGAGCTTCATTCCAAGATGGATGGTTTTAATCCTAGAGGAGAGCGCTATGCAACACCCAACAATGGGAGGGTCTTCCCTCATTCATCCTAATCAGAATAAAGCTTCACAAACCCAGGGGCGTGTCTCTCAGGTATCCAGCTGGCAAGCCCAGGGACGTGTCTCTCGGGTATCCAGCTGGCAAGCCCAGGGGCGTGTCTCTCAGGTATCCAGCTGGCAAGCCCAGGGGCGTGTCTCTCAAGTACCCAGCTGGCAAGCCCAGGGGCGTGTCTCTCAGGTATCCAGCTGGCAAGCCCAGGGGCGTGTCTCTCAGGTATCCAGCTGGCAAGCCCAGGGGCGTGTCTCTCGGGTATCCAGCTGGCAATCGAGATAATTGAAGACACTTTGAATAGTCTTGTTCTTTTTATTCATAATGACCCAACATCAATAATAAACCAAAAAAGCTTCAGTTCTCAGGTGTTTGAACATCAGAATTAACAGATGGAGGAGATAGTATGGACCAGAAATTTTGTATTTATTATTTATAGTTCTCAGAAAATTCCTGTCAGGTAGCAATTGTATCCATTTCATTCAAAATTTTAAAAAATTACATGGTGGGACTGGAGAGATGGCTGGGCTGGAGAGATGGCTGGGCTGTTAAGAGCACTAGCTGTTTTTTCAGAGGTTCTGAGTTCAATTCCCAATAATCACTTGGTGTCTCATAACCATCTGTAAAGGGATCTAATGCCCTCTTCTGTGTGTCTGAAGACAGCTACAGTGTACTCACATACATAAAATAAATCTTTTTTAAAACATTACATTGTGCACACACATACACGTACACCACAGTGCAGATTTGGAGATGAAAGGACAACTTGAAGGTTGTCCTGTACCTTGATCCAGTAGATCAAATCCAGGTCAAGCTTGGTGGCAAATGCTTTAGCCCACTGAGCTGTCTGGTCAGCCCAATCCCATCCAATTTAAAGACCATGACGGGGCATGGAAAGACAGTCAGCAATCAAGACTCTTGCAGAGCGCTCGTGGTGTTACCATCGCCCATGCAGGGCCTTGCTTTAATATTCTTTAATAATTTGGTATGACCCAAATGCTACAGTATGTGCTCACTATTTCTACAGTGAGATGGTCTGCTTGCCTTTTTAATGGAACATATTCACTGGAAGGTTTGCTGTTGGCACAGGACACACCAAGACCAAGCTCTCAGCACAAAGGAGATTGATTTGCCCCAGAGGGACAGAGGGCAGGGAATCAGAGACAACAAGCAGGAGACAGGATAAGGGAGAAGAGGAAGGGAACAAGGAATCGGGAGAAAGAGTATTTGTCCCAAAGGGACAAAGGACTGCCTCTGGATAGAGAGGAGACAGATGTGGCCCACAGGCAAATGGCAGTTTATAAAGGTAAAGGGGGGAACCCCCATTTTAGGATGAGATGTTTAATTTGTTTAAAAAGATTTATTTATTATTATATCTAAGTACACTATAGCTGTTTTCAGACACACCAGAAGAAGACATCAGATCTCATTACGGATGGTTGTAAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGCCCGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCAGATGTTTAATTTTAATTGTGCATGTTAATTAGGTGAGCCAAAGGCGGCTTTTGATTGCTGCACTTCAATACTTTGATACCTGGACTGTGGTAGTCAGTCTCAGGAGGAGGGATTGGCCAAATAAGGGAATAATCCTTGGTGGGTAGCTTTAGGAATATAATCTAAGGGTTTACAGGGGAGAGGGAACGAGAGAAGGGCTTCTATTAGAGCCATGTTTGCCATACTCAGGCTGGCTATAGCCCTTCTTCACACTTAGCTATATACCTATTTTATACTCACATAACATACCCCTTATCATACCAGCCACATTTTAGGTACCCAGTCAGTACATGTGACTAGTTGCTACTGTATTGAATAGCACAGTTCTCTGTTTATTGTGCCTCAATAAATTAAGGTCTATAATCAATATGCTATATAAGTACTTTATTATTTGAAAAAAGAATTCTCTTAAAGGTACTTTTTTTCCTTTAATTTTGAGACAATTTCTTATTATATTGGCTTGCATATATGCATATGTGCTGAGCTGTCTTTGAATTCAGGATCTCCCTGACTTAGCCTCCTGATTGCCTGGAATTCAGACATGACATCACTGTTATCAGCACAAGTAATTATTTTCAGCCATTTCAGACTAATATGTCCTACTCCAATTTGATCACTAAATAATAGATTCATTCTTTTTAGCTTAATGTATTACTCTGCTTTCTTGGAGGGTTCCCCCCCCCTCTCTCTCTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATGCACTACCACACCCGGCTGTTTCTCTTAAATTTAAAGTTTTTATAGTTTTACATGTCCACTCAATCCTAATTGTTAGTATATTTGTGGTTTTCAGTATTTGGTATTCAAGAATATGCTTTTAGTATTTATAGCTTTATAGAGACACTCACTTACTTTGAAAGTATTGTTCAGCCAGGCGATGGTGGTGCACGCCTTTAGTCCTCGTGCTTGTGAGGCAGAGGCCAGTGGATCTCTGTGAGTCTGAGGCCAGCCTGGTCTACAGAGCAAGTTCTAGGACAGCCAAGGCTGTGCAGAGAAACCCTGTCTCGAAAAACAAAAACAGAACAAACAAATAAAAACAAAAGAAGAGAAAGAAATATAGTGAACTCATTCTTTAAAAAGAAAAGAGTATAATCCATTTTCCTATTAATTTACAAAGTTTGATGTCTCAATAATCCAGTTTTAGATGATTTTTATAACACAGGTATATTTCTTTTACCCATTTACAGTTAATTTCCTTTTTTTTTTCTTTCCTTTTTTGTTTTTTCGAGACAGGTTACAGTTCATTTCTATTTCCACTATTAGTCCCAGTAACCATGTAACATTTCTGTGTAAATATTCCCTTTTGGGAACGTTTCATATGGTAAATTACATTTAACTGATGAACAGTCTGGAGCTAAATGTGGCATATGAGATAAACTATATCACATATATAAAAACTTGGTTTATTCACTTTCAAACTTCAGACATTCCTGAATTCCTGTTGCTGTGATTAAACTCCCAGGAAAAAGGCAACTTAAGGGAGAAAGGATGTTCATAATCCCAGGCTGCTCCATCACTGAGGGAGTTAAAGCAGCAGGAACGTGCAGCAGTCGGGCACTTTATCCACAGTCAAGAGTAGGGAGAGGAACTCATGCATGCATTGCTCAGCTAGCTTCCTGCTCAAGCCTAGAGAATGGCACCACCCACAATAGTAATAATTAATAATTCATTCTTCTTCTTATTATTATTCACTCTGGAACCCCAAGCTCAGGGATTAGTGCTGCCCAATTGAGGTAGTTAAGATATCCTCAGAGGCCCTCCCTTCTTCTAGGTGATTCTGTATTTTGTCACACCAATGATTAAAAATAATCATCAGAAGACCTTAATATAGCAATGGGAACTATGGTAAGACACATTGTTCTCGTTAACATTGGGTTGTTATAATCACTAATTATAATGACTCCTTTTTTTATTATCCGAGCTTCATTTCTTCACTACTAATCCTAACTTCTTGGTGTTTTTCAG
Seq C2 exon
AATCAGGGTCTAAGTATGAGACCAAGAAGTTACCACCAAATTCATGTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAAGGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGCAAGAAATCTTTAAAGTGTAATCTTTGTGGGAAAACCTTTTTTCGAAGCTTATCTCTTAAACTTCATCAAGACTTTCACACTGGAGAGAGGTCTTATGAATGCAGTACTTGTAGACACGTTTTCAGGCAGATCTTATCCCTCATTCTTCATCAGCGGGTTCACAATTGGAATAAAAGCTATGAATGTGATAAGTGTGGGGACATTTTTAATAAAAAGTTAACTCTTATGATACATAGAAGAATTCATAATGGAAAGGAAAGTTTTCACCATGAGAAGGCCTCAGATTCATGCCCCTCCCTCAGTCTACACCGTAATAATCACACTACTGACAGCGTTCACCAGTGCAGGAAGTGTGGGAAAGTCTTCAGTCGGATGTCATCCCTTTTACTTCATAAGAGGAGTCACAACAGAAAGAAAATACAAAAATACAATAAATACAAAAGAGGCTTCAAAAAGCAGCCAGTCCTTGTACATAAAAGAGTTTGTATTGGAAAGAAAACTCATGAAAGTAAGAAGGCCTTAATTCAGAGTGCCAGGCAGAAAACTTGCCAGTCGGAAAACCCTTTTATGTGTGGGAAATGCGGGAAGTCCTTTAGTAGGATCTCAGCCTTAATGCTCCATCAGAGAATTCACACTTCAGGGAATCCCTACAAATGTGATAAATGTCAGAAAGACTTTGGACGGCTCTCCACCCTTATTCTGCACCTAAGAATTCATAGTGGGGAGAAGCAGTTTAAGTGCAGCAAGTGTGAGAAGGTGTGTAGTCGCCTTTCATCCTTTATTCAGCACCAGAAAATTCATAAAAGGAAAAAGAAACTCATTGCATGCAAGGAATGTGGAAAGATGTTTGGTGGGATGAAAAATCTTAAAGTGCATCTCAACATCCATTCGGAAGAGAAACCTTTCAAGTGCAATAAATGTAGTAAAGTGTTTGGCCGCCAGTCATTTCTTAGTGAACATCAGAGAATTCATACCGGAGAGAAGCCCTATCAGTGTGAAGAATGTGGGAAAGCATTCAGCCACCGAATATCTCTTACGCGGCATAAGAGAATTCACAGTGAGGACAGACCTTATGAATGTGATCTGTGTGGGAAAGCCTTCAGCCAGAGTGCTCATCTTGCGCAGCATGAAAGAATTCACACTGGAGAGAAGCCTTACGCATGCAAAATCTGTAAGAAGTCCTTCGCTCAGCGCATTTCCCTCATTCTCCATGAGAGAAGCCATACTGGGGAGAGACCCTATGAGTGTAATGAATGTGGGAAGGCTTTCAGTAGTGGTTCCGACCTTATCCGACATCAGAGAAGTCACTCTTCAGAGAAACCATATGAATGTAGCAAATGTGGTAAGGCTTATAGTCGGAGCTCATCGCTGATTCGACATCAGAGTATACATTCGGAGGAAACACCCTAAAGCTGTCGCTATATCTGCAAAATCTAAAAAGGATTTCAGAGACATGGGAAGTGAGCGTAAGTGTTCTTGACCTTATGATGATGTATGTCCCAGAAACTCATCGTAAGTTGTAACGTTTGAGACAAAATATATATTTACTATACCTGACCTACCAAATGTGACCATTTAGCAGCACAGCGCAATGTGGAGTCCCAGTTGTTCATTCTCCTGACCCTGTGGCTTCCTGGAAGCTGTGGCCTGATCCTGCTGCCCAGCATCGTGAGAGTTATCATCCTGCTTATCATCAGCCTAGGGAAAGATCACACTTAGACCCAATTCAATTCCTAGTTGAATAGATATTGCCTCTGTACCATTATAATGCTGAAAAATCACAAATCCGCAATCATTCGTTGGAGGGAGTGCACTATCTGCCAACAAAATGTTTTGTGTCTGCGGGGCCATGTTATGATACTCTCCCTTTGAAAGCCAAAAAACCAAAGCAGTCGGTAGATTCTGAAGTGAAGGTCTGAAAGCAGCTGAGGTATGCTCAGAATTTTGGATCAGGGTTTGTGAGTGAAGGGGTTTTTCGGTTGGCATTTCATTTCTAGTACAGCATTCAGGACATATTATTGGATGCATACAATGAGATGGAACTGGAGCTAGAGTCCACTTTTCTGGTGGAGCTTTGAGCCTGAGTTGAGGTCCCAGGAGAACAGAGTGTTAAGTCTAACAGGCAGACCAGACCAAGCAGGGTGCCTCTTTCTCCTTCAGAGCTTTGTTGGGGTGAGGACGAAGAGTGAGTCTTTAGGGTGCTAGAAATAGTAGTTACAGTGGTCACACTGCCTCCATGGTTGTGAAGATACACTGCGAACATTTAGTAAGACAGGCTGGGGGCTTGGGCAGGAGATACTGAAGAATGAGAAACTTGAGAGCAGGGAGAAGCTATTTTTTACTTTTTTTACTTGGAAATAAATCCTCTATATTTATATAAGTAAACAGTGTTTTCATGCAGTACGGCTATTTGCTCTGAAAGTTACTCTTGAGATATGTGTTTGGGTTTTTATGGTCTGGATATTTGTGCCATCGCAAACCTCACATGTTGAAGCCCTAATCCTTCAATGTGATGATATTTTCAAATGAGATTAATGGAGTTGTGGTGCAGATGGGCCTTTTTGATATGTTTATTGATCAGAGACCTTGTCTCCTGTCCCATGTGAGGACACAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACCAGAACCTGACCAGTTTGCTACGCTCACCTTGGACTTCCAGCTTATGGAGGAACTGTGAGAACCTAATTTCTCTTAAGTCAGCTCGTCTGTGATGCTGTGTTATAGCAGCTCAAGCTGATTGGTTCATGGAAGACCTCCTAGGTTAAGGTACTGGCTGCTTTCCTTTGATCCATCCAATACGTTCAATGTATCTTTTTTTTTTTGGTCCCCTTTTCCAGCATCTGTAAGCTGTATAAAAAATAAAGTCTGTGTTCTTTTGTGTGATTAGATTATATACAAAGAGGTTCTTTTACATGTTCTCTTCTGCACGTGCCGTTTAAGAGAACATCTGTTTCTTGTTAAGAAAAGCTTATAGTATTTGTTTACATTGTTAAGAAAAGTTTATAGGGGTTCTAATTTTGAGCACAAACATTGGGATTTGAATAGGAAATGTCCACCACCACAGGCTCACCATTCCCAGCTGGTAGGAGGCTCCAGGTGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000054893:ENSMUST00000086327:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.130 A=NA C2=0.139
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.9),PF0009621=zf-C2H2=WD(100=4.4),PF0009621=zf-C2H2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types