MmuINT1010595 @ mm10
Intron Retention
Gene
ENSMUSG00000055978 | Fut2
Description
fucosyltransferase 2 [Source:MGI Symbol;Acc:MGI:109374]
Coordinates
chr7:45648591-45666394:-
Coord C1 exon
chr7:45666198-45666394
Coord A exon
chr7:45651349-45666197
Coord C2 exon
chr7:45648591-45651348
Length
14849 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGT
5' ss Score
10.03
3' ss Seq
CATGCTTTCTTTCCTGGCAGCCA
3' ss Score
10.24
Exon sequences
Seq C1 exon
CAGCCTCTCTGGTTCTAGGATGTCAGCAGGTACACCCTGGGTGGAGTTTCTATCCAGGGCTGTGGTTAAACTCAGGAAGTTTCCTTGGTCCTGAACGAAGAGCCAAGCTGGAAGATACACACTGCCGTCCAGTCCGCAGAGCCACGCTGCGGTTCGTCCATTCCTAGGTCATTTCCCTGTTACCACAGCCAGAAGAG
Seq A exon
GTGAGTACAGGTGAGGAGGTTGGGGGCAGGTCCCCTGAATCCTGACGAGCCCTAGGGATCCAGGAACTGGATGCATTGGTCTCTGACCCCACCCCAGGGCTCTCTGGAAGGAGATGCCATTGCTGAGAAGAGACCCTGGTTCTCCCAGACTCTGGAGTCCCAGCCTCAAGTCCCCAGCTAGTTCCTTCAGGTCCTGAGTCCTCCAGATCCCGGGATCCCAGACCTTAGTTTTTCCAGTCCCTGGGTCTCCCAAGCTCCCGGCTCACCAGCCCTGTGTTCGCCCAGCACCCCCATAGCCCTACTCCCTGCACACCGACTACCATCCTGCCCTGCTGGTTGACCTCTTAACCCCAATCTCCGCTTCACCTCTCAGATCCTCAGCTCTCTCCCTGCTACTGATTCCAGTAACAAGAGTAGATGAAAGGCAGAATTGGGCTGGATGTAACCGGATTTTCCTGTTCCCGTATCCTTGGCTTCCATATCAGCCTAGGGGGCCCTCAGAAACCTGCAGCTGTCATGGGGGGCAGGGGGGGGGGAGGATCCCGATCCTCTGTTGGAGATTTCAATGTGGCAGCTACTCTGATAAACTGCCCTGAGACTCCTAATGCCAGTGTTCCTTGGCACAGGGACAGAACAGGAAGAAAGCGGTGCCAGTCACAGGAATGGCACTGATGGGGTGGAGCCAGCCATGTACCTGGCTCCTGTCTCTGAGCTGATGTGGAGGGGATGCTGGGGGCAGGGCGCTCTGGGTGGAAAAGGCAGTTCTGAGGACACAGGCTAGAAAGAGGTGAGTGCAGCGGCTTATGCTTGTCATACTAGTATTCAAGACGCTGAGGCAGGAGCATTGCTAAGTTAGGTATCAGCCTGGACTACATCGAGAGAGCTTCTCTCTCTGCTTCTAGGGAACTGGAGAAGGATTCTTCCTTCAAAGCTGGGACCTCTTTCCAGCATACCGCACCCCTCCAACAGAAGGTAAACTGAGGCTAGGCACATGGTAATTGATCTTCCTGACCACAGAGATCAAAGAGAGAGTCTAAGCTCCTCCCATTGCCTCCTCAGCCTTGGACTGGAGCCAAACTGCTGCTCTACAGTCCTCCATGGCTTCAGCTTCCAGTCCTCCCACAGTCCTTGGTCTTCCCAAACTCACCCAAGTGCCTACCTAGCCTTTGGATCACAAGTGATGTGAATCTGGCTCCCTTCCTTAGCGGCAGTCTGCTGTCCCCTGAGAAGACGGCAAAGGCGACTGAACATGAGTCTGTAGTCCCCGAGCAGCTCCGGGTGTCAGCATTGTGCTCCTATAAAGTGAATCAAAGGCCAAGGGCATGGCTCTGGCCATAACCCACCCTTTTTTCCGGCTTTTCTAGGTAGGGTTTCCCTGTGTGCGGCTGGCTGCCCTAGAACTCACTCTGTAGACCAGGCTGAAATCCGCCTGCCTCCTGTGTGCTGGGATTAAAGGTGTGCGCCACTTGCCTGAGCCCCACAGTCCCCATCTTTTCCCCAAAGTTGGATATGACCTCACAGCAGGCTCTGACCTTTCTTTGCCCTTTGGTCTCCCTGCCATTGCTTCCCTTCCTGAGGGATGGGAAGCAGCAGAGAGGCAGCCTGAAGTCCTTCGTCCAGAACAGCCTCCTTTCCTTGTTCTCAGAGGCCAGACAAGCCTTCCTGTGTTCCTGTTTGCAGGAGGAGACTCAGAGCCCTCAGATCAAAAGCCCAGAGATTAGCAGGTTGGATTTCAAAGTGTGTTTTTCCAGTGTTTTCCCACCGTAGAATTGGTGCCAGGATGAGCTTGGTGGAGCAGACCTGACATCCCAGATACCTCAGAGGCTGAAAAAGAAGGGCACAGTCCAAGGCCAGGCTAACTGAATGAATTCAGCCTGGGCAACTTAGTGAGACCTCGTCTATAAAGTGGGGGTATGGCAGCTCCAAGGTAGGGTTAAGAAGAAGGACTTTAGTGTAGATATGAGAGAGAATAGCCAGAGAGTCCAGAGAGTCCAGGACAGGGAGGGAAAGTAACATATTATAGAAAGGAAGAGAGGGTGTGGGGGCAGAGAGGAAGCCAGAGTGACAACCAAGGAGACTAAGAAAAAAACCAAAGGGGAATGTGATGAGCATAGAAAAAAAAAAAAAAAATAGTGTCTTCTAGGCCTGTAAAAGTAGCTCAGCTGGGAGCCCCACTACAGCAAGGCTGCACCCGGAAACCAGAACCCGCCCGGTTGCATTTAAAAATGAGGGCATGACTTCAAGGTTTGGTTGAGCCGATTTTAGATACAAGGGTGAAAGATGCAGGGGAGTCTGGAAGGATCCAGACTGGACACAGCCCTGGGGGAGGGGATGAGAACGAGAGAGGACGAGAAATGGGAGAAAAAAATGGCAAAGGGTGAAAGAGAGTCCAGGCGCAGCAGGAAGAGCCAAGAGGATATTTAGGGATGGAAGAAGCTGGAGGAGGGGAAGGGAATGAAGCCCAGGGGTTGGATAGGTTTAGGGTCAAGGGTGGGGTATGCCAACTAGGATGATTCTGAGAGTGGATGGTCCACTGGGGTTTGTTAACGAGGCTCTTCAGCCATTTGCCCTGGGTTTCTTTGAGACTTACCATTTTCAGCCTTTTGTTGATGATATAGGGCTAGTTAATCTCCTCCATAACTGCTTCCTGCTGAAATCGGGGTGTTGTTGTTGGGCCCAGGAAGGCTGGGATGATATGCAAAAGACAAGAAGAGGCTGGGATGATATGCAAAAGACAAGAAGGTAAAGAGAAGTGGAGGCTGGGGCACATCTGTTTTGCTCCCTGCCCATGTTCTGCGGGACTATCTGGGGGCGACTGTAGCACAGGCTACTTCCCAGCAGTCTGACGAAGGGGCTCAGGCTGGTCAGAAAGTCCCTCGGAAGCAACTATGGCTAACGCAACTGGAAATCTGCGCCTGGAAATCTGCTGGGTCAGACATAGACAAGGGACAGAAAGTAAAGCTAAGGAGCTTATGGGAAAATGTTTGTCTTAAGTGCACATTTGAAACTTCCAGGCCTGTAGTCAGGGAGGGGGGAGGCCCAAGGCCAGGGAACAGGGCTGGGGATGGGGTTCCACACTGATGACTACACAGGTGGGGAAACTGAGGAATACTTATCTGGAGTCCTTTCGACCTGTGATGGGTGGATACAAGTTGCGACTTCCTGAAGCTTACAAAAATTGTGTACATTTACAGGAAGAGATAAAAGTTTTAGATAGCCGGGTGTGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATATCTGAGGCCAGCCTGGGTTAAAGAGTGAGTTCCAGGACAGCGTGGGCTACACAGAGAAACCCTGTCTAGAACCGAACCCCGCTCCCTCCACCAAAGAAGAAAGAACTTGTGTACAGGAAGCTTAATAAAGCTTGCTTCTGTAATTAATTGCATCAGTTCTTAGTATGACTACAAGTATATTCCTGAGGCATATAAAGTTTGCAAGACCATCTTTTGATACATATGCAGCTAGAGACACGAGCTCCGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGATCCATCCAATAGCTGACTATGAGCATTCACTTCTATGTTTGCTAGGCCCCGGCATATCAAAAACATTTTATTTATCAAACATTGTTACTTATCTACATTTCCTACCAGCCCATTGTTGAGCAATTAGCAAAGTCATAGATAGTTAGTTACATGTACATTTAAATTTGCTTTTGTTAATCTGAATAGAATTTTATAACCTTGAAATTTCATCATCACATACAGAATATTTTAAACCAGAGCTGAATGGATCACATATACAGTATATTGTAGCAAATATCACATTGAATTTCTATCATCACATAAGAATTCATACCAATCTAAAATATTTGAGACTTGTTGCTGATTTCTTGGCCTAAAAGGAAATAGATTAATAAGCTATGGGCTCAGTGAGACTGAGAAGTTTTTTTGTTTTTTTGTTTGTTTGTTGTTGGCTTGTTTTTTGTTTTTTTTGTTTTTGTTTTTGGTTTGGTTTGGTTTGGTTTGGTTTTTCGAGACAGGGTTTCTCTATGTAGTCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCTGGTGAGACCATGTGGTCATCTTAAGATGGTGAAATCACATGGCATGTTACAAGCTATGGGCCAACTTGGTTGTTTTCCTAATACTCACTCACACACACACACACACACACACACACACACACACAGAGTCAACATTTGTTTTCCTAATATATATAAATGTATATATGTGTATGATATATATATATATATATATATATATATATATGAGTTGCATCCAAGTTACTTGCACATATACATACAGATACCCATGTATAAATTTTTAATTGTAAGCCTTTTGTTGTAATTTTAAAGTCAAATATTGTTGCAGATTATATGGATTTTAGACCATACCCAATGAACAACTTACAAATCCTTAGATAAGAGTTTACAGTATATTAATATTTTTTAAAGAGAAGATTGTAAAGAAACCAGAGATAAAGATTTTTAAGAGTGGAGAAGAAGAACCTTAAGCGTAGAGCAGAGGGAGTTTAGACATAAGGCACTTGGAGATCGTTTGTCCACGGCAGTGAGAATTAGGAAATCAGGTATGCTGATTTTTGGCATTTGAATGGGGCCAAGTTGTAATAAAAATCTGAGTCCATGCCGGAAGAGAGAACAAGCTTAGTTTAGCACAGGTTGTCTGCAGAAAGCTAGGAGCAGGGAAGGGCCCATGGTCCAGATGGGCAGGCTTGTGGGAGCCAGAGACATGTGGAGGACACAGGTGGCCTCTACAATTTGGAATTAAATTCACAGACTAATGATGCATCCGTACCTCAGGAGTGGTTCTGAACAGACGCTGCAGGGAAAGAGTGAGCTTCAGTTTCTGCTCCTCTGTCTCCAACTCCCAGTTGTTGCAAACTTACAGGCAAGACTTTTACTCAATGTGGGGAGGGACACCAGACAGAAGCAAGCAGGGCTTGGAGCGAGAAATAAGGAATACGGAAAAGAGAAGTGTTTTATTCTCCCCCCACCCCCACCCCCGATCACTTGGGCAATATCTTGAGGTCAGGTTCAACTCGTTTAGATGTGAGGTAAGAGGAAGCAGTTCCCACAGATGAGAGGAGTCCCAGGCCTGGGTCCAAGGCAAGATGCAAGGGACCCAAAGGAAACCAGACTGAGGGCAAAAGTTGTCCAGTGAATTGTCATTCAGTGGACAGGGGTCAGGGCTAAGCCCGAGCAGACACAACCGTCTGGTACCTGATACCAGGGTTCTCAAGAGAAACCAAGAGGGCAAGAGAAAGGTAGCCTCCTCCAGGAAAATGGTCAGACTCAGAGAAGCATTTAAAGTGAGTTAAACAGAACTCATGAACTGTTGGTGTTGAGTGGAGTGCCTAATGATCTGTGGACCGGAAAGCAGATCTATTACAGGTGTAGCGGTCAGGTGGGGTTCCAGTGTGGCCAGACACCAGGAGAGTCCCTCCAAGGTCACAGCACCAATGTTATAAAGTGTGCCTGGGGGGTGCCCAGGAATGGCTAGGGTATCTTTGGCAGGCCCATGCTAAAACCTGAAAACGTACACCATGCAAAAGATCTGGCGTAGAAGACGTTGATTGAGGGAAGTGGGAGGAGTGAGAACCTGGGAGGAAGGACAGTGGCAGACAAGCAGACATGTAGGCAGGCAGCCATAAGGGTAGAGAGAGGGGGCAGGGAGAGAATGAATGTGGGGGTGGGGTGGGGCAGGGAGGAGACAGGTGTGGAGACCAGAGACAGGGAACGCAAAGCACAGAGAGATAGCTGGGGGTGGCAGGAGGGTCCTTTTATCCATCACCGCCACATCTGGCACACCTGGCAGTGGCAGATGGTCGCAGCAGGTAAGCAATCGCTAGGTCCCTGGGAGCAGGCCAGAGAAATTACCTGTACGCCAAGACATTTAAGTCTATACTTAGAAGACAACCAAAGGTATTCAAAATTTGAGCTTATGACTATGATAGTAGCAGCAGTAGATTCATTGCCTCACCAGAATCAGATTAGTAGTTTCTCAGATCTCCATTGATTGATGTTAAAACTCGGAACTTTTGAAGTCTTCATAAATGCCACAGAGAGGGAAAGAAATCCGAAACATTTTCTCATTTGATTTTTTACATACCTTGAATCACTTTATTAGACCCTTAGAACTTGCACTTACACACCTTAAGCCACTTTCTTAGACACTCACGGTTTGCTTAAGCTTGACATCTTGTTTCCGTAGCCAGTGATTTACCGCGAGACGCGAGACGCCAGTGCCTGATTACTGAAAACAGCCATTGCAAAGCCAAGTTCCTTCAAATAAAAGAATAGTTTAAAAAAAAAAAAAGAGTTGTATTAAAACCGGTTTTATGAGTTTATCTCTATCAGTGCGAAGTCTGTCCCCGCAGACCCAGTAGTTCTGGAAAAGTAAGGCCTGACTTTCTGTATGGGATGAATGAACTCGCCAGGCAGCTGCGGCCTTGAGGATGGAGTTAGTATGAGTTAGTATGCTTAGTCAGCATAAAGGTACAGTCAGTCAGTCAGTCAATATCCTCAGAGATTTGAGGATAAATTATAGAGGGACGTATAATCCAAATGGCCTCTGTACCAACTAAAATGACAAGAGGCTTCCCGGCTACCCTAGGCTCCCATGGACTGGATGGCTTTGCTGGGGTCAGAGATAGTTAGTCTCGGCTGTCACAAGGGCCAGCATTACACCTTCAGTTGTTGCACAGGACAGCATAGGCCTTTGCCTGCCACACCTAGGTCTGAGAGATTTTCCCGTCGAGATGGTACCTGGGAAAACTGACTTTACTTAGAAGAGGTAGACTCCACAGTTTGGGTAGAGCCCCCACAGAGGGAGAGGCATGGGGCAGTACCTTCCAGTGGTTAGAGTCACCATGATCCAGGTGGCATCAACTTGCCCATCTGTCTTCTTTGGAGATCTTAGAGTGGTCTCTAGGAGCTAGCACCTCTGTCTGTTGTGGGAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGTCTTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACCGCCCAGCTGAAGATTTTTTTTTAATTAGGTGTTTTAAATTTAAATTCAGCAGCTCTCTGAAGAATTTGACAACCTTCTATTAGCTGGATTAAACAAACTGATTTGGTTTTAGTTACTTGCTTTAGGCTTAACCTTGAAAAGCATATACACGGGGCTAAAGTTTTCCTCTGTAAAGGAATTACATTTCTACTGAGTATGACTGCAAGCTTAGCTCTGAGCACACTTAGAAATGCCATCTTGTGTAAGGCGACTGAGCCTTGACTTACATGTCGTTACCTTTAAGAGTTTACAACAAATAACAAGTTTACCAAAAAGATTTAGCAAAGCCACGTGGTTTTCTTCCGTCCTGATGAGGTCATCAGTCAAGATGGAGGTTAGCCTGAAAGACCCCCCGAAGAGGGGAGACCCTCACTCAAGTCTCGGGATGACACGACCCCCCAAGAACTCACAAGAGACCTTCCTTGCTGCAAGCGCATGAGGTTTATTGACAGGAACCAGCGCACTGGAGCCGACTCTTATCGCACGCAGGGGTAGAGGAGTTCCACCCTGAGTAGCTGGGAAAGGGGGTATTTAAAGGAAAAACCATAACCCAAGGGGGTAGGGAGGGTGTTATTGGAAAAATACCAAAAATACCAGTGAAGAATCTCAAGGGGGAAACTCCCTGCTTCTTAAGATTGTTCTCAAGACTTTAATCTAACTTTGGTCAGCCAGGTCCTGGGACAGGGTCACTGAACTGGCTTGTGTGTCTGTTCTGTGGTCAGCCAGTTCTCGGAACAGGCTGTTTCAGGGCCCAACTATTTTTCTTTCTTGGCTCTAACTTGGTCTAGGGGGTCAAACTTAATTTTTTTTAACCTTACAAGCCATGTGGTTTAAGTAGATTTAAAATATTATATATGTACATATACATACATGTAACACATATACATAAATATGTATAATATATATGTTTTAGTTTTGGTTTTTCAAGACAGGCTTTCCACATGTTGTCCTGGCTGTCCTAGGATTTTGGAGTTTTTTTGGTATTTTGTTTTTCAAGACAGAGTTTCTTTGTATAGCCCTGGCTGTCCTGGAATTCTCTTTGTAGACCAGGCTGCCCCTGAACTCACAGAGATCCATCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAAGTGTGTGCTACAATGCCAGATGATAAAAAGCTTTTATAAGAGTGGAAAGTAGAGGGCCGGGCAGTGGTGACGCACGCCTTTAATCCCAGTGCTCGGGAGGCAGAGGCAGGGTGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTATCTCGAAAAACCAAAAAACAAACAAACAAACAAACAAACAAACAAAGAGTGGAAAGTAGAGAAACCTTAGAGATAAGAGACCTTTGGAGATGTAGAGCAGTTTGGCTATATGGATTGTGGGGTTGTCTTAGACAGGGTTTCTCCTGCTGTGACAAAACACTGTGACCAAAAGCAAGCTGGGGAGGAAAGGGTTTCTTTGGCTTACACTTCCAGATCACTGTGCATTATTGAAGGAAGTCAGGACAGGAGCAGGGCAGGGCAGTATCCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGTGCCACTCACTGGCTTGCTTCCCATGGCTTGCTCACTCATTGAGAAAATGCCCTACAACTAGCTCTCATGGAATCTCGTCCCCAAGTGAGACTTCTTCCCGGTGACTCTAGCATGTGTCAAGATGACACATAGATCCAATCAGTACAGGGATCATGTGTGAGTTATAAATTTATATATCTATTTATATATTTATAAATGCATATAGTTATATATTTACTTATTTATTTTAAAGGTAGGAGTGCTCTGTCTGCATGTACACCTGCAAGCCAGGAGAAAGCATCCTTTACAGATGGTTGAGAGCCACCATGCGGTCGCTGGGATTTGAACTCAGGACCTCTGGAGGAGCAGTCAGTGTTCTTACCCGCTGAGCCAACTCTCCAGCCCAGGATCAATTGCTTGTGCAGTGGCAGAGGTTGTTACCATATGAGAGGATTTAGAAATTAAGTGTGCCATCGTTGGCCAAGCAGTTTGCAGGAAGGAAGACAGAGAGACTCTAATAACATCTCGGAGTCTGAGGAGGAAAGAAAAAAGGTTCCATGTGGCTCAGGAGGATGTCAGGAAGCCAGAGACCGCCTCAGGGTGGGTGGTCGGGGGTGGGGGGTGGGGGGAGGCATAAGGAAGAGAGACAGAGCAGGCAGCTCTAAAGGAGAGGAAAGAAAGTTCCAGAAAGGAGCTTCAAACATGTCTGAGTGAGAGGCTAGGGAAGGCCCAGGATGGATTAAAGAAGCTGCTGGACAGACACAGCAGGCAGTTCCTCCAGGGACTCAAGGGATGTGCTCAGAAGGGTGTAGCAGGTCAGAGAGATGCCGGGACAGCATCTGGAGGGCAGAGTAGGCTCCAAGTGGCACAATGAGTAGCCAGAAGGCATAGCAGACTGCAGGAGCCAGAGAGTCACTGACGGACTAGACACGGAGGGGGAGTAGTTAGAGCAAGTGGGGGGTGGGGGGACGCAGCATCTGGAGAATCAGACTCTAGAATTTAGAGTCAATCATGCCAAGTGGTAGGAGCCAGCAGAAACAAATGACCATACAACCCTTAGCCGAGCCAAGCCAGTAGCTATACCACTCCTGTGGTTTCAGCACCAGATAAATAGAAACCTGAGAACGGGACACCTCCCAGGTGTGGCTGAGAAGATTTGTTGTACTTATGAGACAGAAAACAGCCAGAGGCATCGAGAAGATGCTGAGCCGGGCCAGCCAACGAAAACTGACTGGGCCATGAGAGGGTGGGGTGGGAGAGAGTCAGAGAGGAAGAAAGGAGAGCGGGAAGAGGAGAACGGGCAAATGGGGGAGAGCTCCAAAAGCAGGGCCAAGAGCCAGGAGGTCTGGTAGTCAAAACGGCTGCGTTATAGGGGAAGCAGAGAAGCTGGGGGAAGAGAATGGAAGATGAGGGCTGGAGAGGTTTAGGGTAGATATGTCAGCCAGGATGATTCTGTAATAGGCACTTGCAATACAGAGAGCCTGCCAGTCCACTTTGATATGTTAAATAGGCACCTCAGTTAGCCTTTTGTCCCAGATTTTTTTTGAAACCTAATTCCAGTGATACACTTATTCAAGACAACCAGACACACAGCTTCTAATAAGAGAAGTCCACAGTGCTTATTTGACGTGTATAAACAGAGATACGCTCCTCATATCTTCAGGATTGCTGTAGAGCCCAGAGAGACGCCACCTTGATCTCCCAGAGACTGGAGAGTCTCCCCCGGGATCCTTATCTGTGAACTTTCGGCTAAGGTACATCTATCAGGTGAGCAGCCTTGGGGTGACAGGCTTAGGGGCTCTAGTTAGGAGCGTGAATCTTGTGTGATGACCGTCAATATAATAAAGCAAGCATAACTTTTATTATGCCAACTATGTGTACCTACCTTCTTGCTCAACAAGGACCAAGGGAGCCGTGGCTGGAATTGCAGGTTTTTATAGAAAAAAAAAAAAAAAAAAGCTGGCAGAAGCAAAAAACACCAAGTGGAGACGTTCAGGGTAGGGGTGAGAAGAGAGGAGCCCAGGTACAGAGTGAGCCTGGACAGGATGTACTTTGAGATGCTAAAAGGCGCCACCTATAGCTATGTGTTCCTTTAGACATTGATAAGGAATGCTCCTTTGGTAGAGGGGAATTGGGTACCAGAATCTGGGGAGTAGAATTTCCCTTAGACCTGACAAAAGGCAAAAGTAAAAAGACCGGAAGTGTTGATTCAGACTGGTGTGGTGACACCAGCCAATGATCTCAGCACTCCCGAGCTGAGGTACACTAACTAGCCTGGGAATGAATTCAAGGTCAGTCTAAGCAATTTAGTGAGACTGTCTCAAAGTTAAAACAACAACAAAGGGACAGATAAGGCTGGGGGTGTACCACAGGAGTAGAGCCCCTGCCTCCAATCCCGCAGTGAAGGGTTGGGGCGTGGCTTCATAGTAGAGGCCCTACCTCTAATCCCTCCAGTGAGGGGCTGGGGGCGTGGCTCAGTAGCAAAGTGCTTGCTAAGCACGATGGGCACCCTGAATTCCATCTCCAGTAGCAAAGAAGACAAAAGAAAAGAAAAAGACTAAACCCGCGAGGAGACGGAGTAGGCAGGATGACGTCATCTCCGATTGTCTGCTCCAGCCCTGCTCTGCCCTTACCTTTGCTCTCCTGTCTCTTACCTGGCTCTGATCAGTCTCTTTCTTGCCTGTGTGTGTTTTATTGAGACAAAGTCGCACTCACACTCTGGCTCAGCTCTCCAAGTGCTAGGATTCCTGACCCACCACTCTTGCTCCCCGCGGCAGCGGCCTTCTTTCAAGCGCTGTAGTTGTTGGTAATTTTCCACGTGCTTTTCTCCGGAGGTTGGAAACCTGTCATTTGCTTTCCGTGGCTCACACCTGACATCCTAGCACTCGGGGTGGGGGGGTGGGACGGGAGTTTTGTGCTGAAACGGGAGGGCTGCTATGAATTTAAGGCCAGCCTTGGCAACATAGTGTGTTATATAGGCTAGTCTGGGCTACAGAGTGAGACCCAGTCTGATAAAAGCAACAATAAATAATCTCCCGAGTATTGCTGAGCTGGGAAGTTGACGCAATATAGCAAGGCCTTTCCTTTCCTACACGCACTTACCTGTGCATGTGGAGGCCAGAGGTCAGTATCATAGTCTTTGATGCAATATCCGGTGTCTTCCTGTATCATTTTCTACCTTAGTTTGGGAAAGAGTCTTTCATTGAACCCAGAGCTCCAAATCAGGTTACACTGGCTGGCTGGGAAGCTCTGAGGGTCTGTTCTGACCCAGACGCCAGTGCTAGGATTACAGACTCCCCCTACCAGGCTTCTCCACAGTGCTGGGCAGCGACTGAGGTGCTCAGGCATGTGCTACAGTCACATAGCCCTCTGGGCCATTTGCTTAGAGCTGCCTTATTTTTATTTTTAATCTATGTGCATGAGTCTGTGCCTGCTTATGTCTTTATGTGCACCACATTTGTACAGGTGCCCACGGAGGACAGACAGGGGGTGTCAAGATTTCCCAGAACTGGAGCTACAGGTGTTTTGTGAGCTGCCTGATGTAGGTGCTGGGAATTGAACCTGGGTCCTCCGCAAGAGCAGCCAGTGCACTGAACCAGCTCGTCAGCTCCTCCCTCTTATATTGAGATAAGGTCTCTCACTGAGCTCACTGGTTAGACTAGACTTGCTAGCAATCCCCCAATAGCTCCCTGTCTCTGCACCTGCTGTTGGGGTACAGAGATGGGTTGTACTGTGGTCACAGACACCTGTACTACCGAGCTACTGTGCGGGTACTGGAGGTCCAAATGCAAGTGTTCACGCTTGCTCAGCAAGCTTTAACTGCTGAGTCATGTCTCCAATCCATCCCTAATTATTTATTTTGAAGCACCTCACACAGCTCAGACTAGTTCCAAACTCACAGCGATTCTCCTGCCACAGCCTTCTGAGTATTGAGAGGGCAGGCAAGCACGCCTCGCCTGAGGACTATATTCCAGCCTGCAGTTCTATGCTAACAGGGCTGAGCTGACTTTGTAACTACACACCTGGACAGCCTGCAGCCTCTAAGCTTTCATCTGTTCACAAGCTGTTTGACTGGATACCAAAACCCTCTTGACTCAGAGTCTCTGGGCCTAAGCCTGTGGTCAGGACTATAGGCCCTGGGCCAAGAAAGCCAGAAACTTTTGTCTCTTACCTGGAGGTGCACAAAGGCTCCTTTGGAGGCCGGTAGCGGGGCATGCTCATGGCTCCCGACCACGTGTCCTCCGGGATGAAGTCGTAAGACTTCTGAAAATCTTGGGGAACCCGAAGAACTTGGGCCCTCCAAAACTTTCTTTCCTGTCTGGATCTGTAGTTACCAGTCTCACCTGGACTTTGCCTAACTAACACTTGGCATACACGTTGGTGCCACCCTGGCTTCAGATGACAAAGTTCACGCTCCTCTAGAATCTGTGGGTGACAACCTCTTTGGGGTCTCATGACCTTTACCGAGAGGTCACCTAAGACCATAGAACACAGATATTTATTTACATTGCAATTCATAACAGGAGCAAAATTATAGTCACGAAGTAATGATGAAGACAATTTTATGGTGTGTGTGTGGGGGGGGGTTCCCCACAATATGAGAAACTGTATTAAGGGGTCACAGCACTAGGAAATTGAGAAGCACTGCTCTAGACAAAGCCTTCAGTATACAGATGCCCCTGAACCTGATGTAGGGGCATGTGACAATACCAAAGTCCAAATAAATCCCACCTAGAGTTTCTTACTTTGTTTTGTAGTGTTTTGTTTGTTGTTGTTGTTTTAGTCTGAGACAGGTTCTTACTATGTAGAGCAGGCTGGTCTTGAACTCATGCAGATGTGTCTGCCTTCGGAGTCCTCAGATCCAAGGCATCCCCCTGTATACAGATTGTTTTTGTTTTTGTTTTTTTTTCTAAGATTTATTTATTTATCTGTGTGTGTGTGTGTGTGTATGTGCACGCATGCGTGTGCATGTTTGTGCAGAGTCTGCAAAGGCCAGTGGGGAACATTTGCTCTGAAGCTGGAGGTACAGGGTGCTGTGAGCTCCCACATATGGGTGCCAGAAACTAAACTGCAGTCCTCTGAAAAGCAGCAAGTGTTTTTTAGCACTGGGTCATCTCCTCAACCACTCTGTTACTTTGTTTTGTTTTGCTTGAGACAGTTTCTCTATGTAGCATTGGTTGGCCTGGAACTCACTTTGTAGACTTGTAGCTCTCCGGCCTCAGCCTCCTCAGTAGCTGGGATCACAGGCCAGTACCACTCTGCCAAGCTGGAACTAATTTATCTCCATCAACCAGTGGAGAAAGGAAAAGGGATGTGTGAAAAAGAAGATGCTCTGGGACCTTCTCAGGCAATGTAGAATGAAGCCTGCCCTTGGCCATATACATTCAGGCCTTAAGCCCGGTGTACTGTTACTTAGCCTAAAATATGTATATATAAATAATATTAGCTTAAATATGTATATATATATTACTACCTATGGACAACCTTCTTACCACATTACTAATTGTGCTGGAATTCTTCTGAGGTTGTGAGATGCTTTGGACTCTAGAATGAAGGCCCCTTCCCCTTCCTCTGTCTCCCATAATGCCCCTGATTTTGTTGTTGTGTTTATTTGTTTGTTTTTTCATGACTCCTCATTTGAGAACTTAAAGCACACTTTCCCTCTAAAGGGACATATTGGCTCACTCTGGATTCCTACACCAAAGCAGAAAGATTGGGCCACACAGTTTCCAGCTAGACTAAGCTATGGCATGAAATCAGATATCAAACAAACTCAAAAGAAAACAAAAAATATCCAAGAGGCACAATGCAGATGATTAGCCCAACGGATGTCAGCTATTTATGCATACATGATTGCAAGCGTGCACCTAGCTGCTCTCCAGGTAACCTGCCATGCTTTCTTTCCTGGCAG
Seq C2 exon
CCATGGCGAGTGCCCAGGTACCTTTCTCCTTTCCTCTGGCCCACTTCCTCATCTTTGTCTTTGTGACTTCCACCATCATCCACCTCCAGCAACGAATAGTGAAGCTCCAAACCCTGTCAGAGAAGGAATTACAGGCGGTTCAAATGTCCTCACCAAACGCGGCAAGAACAGACATGCAGCAGAGTGCCAAGCTGCAGGGCATATTCACGATCAATTCCATCGGCCGCCTGGGGAACCAGATGGGCGAATATGCTACATTGTTTGCACTGGCCAGGATGAACGGTCGGCTTGCCTTCATCCCTGAATCCATGCACAACGCTCTAGCGCCCATCTTCAGGATCAGTCTCCCGGTGTTACACAGCGACACAGCCAGAAGGATCCCGTGGCAGAATTACCACCTCAACGACTGGATGGAGGAGCGTTACCGCCACATCCCGGGGCAGTATGTGCGTTTCACGGGATACCCGTGCTCCTGGACCTTCTACCACCACCTGCGCCCAGAGATCCTGAAGGAGTTCACCCTGCACGACCATGTGCGTGAGGAGGCCCAGGCTTTCCTGCGTGGCCTGCGGGTGAATGGGAGCCAGCCGAGTACCTTTGTGGGTGTCCATGTGCGCCGAGGGGACTATGTGCATGTCATGCCCAAGGTGTGGAAGGGCGTGGTGGCTGACCGGGGTTACCTAGAAAAGGCCCTGGACAGGTTCCGGGCACGCTATTCATCTCCAGTCTTCGTGGTTACAAGCAACGGTATGGCCTGGTGCCGGGAGAACATCAACACCTCCCTAGGAGACGTGGTGTTTGCGGGCAATGGTATTGAGGGCTCACCAGCCAAGGACTTCGCGCTCCTCACCCAGTGCAACCACACCATCATGACCATTGGAACCTTTGGGATTTGGGCTGCCTACCTGGCAGGTGGTGATACCATCTACCTAGCCAACTACACCCTTCCGGATTCTCCGTTCCTCAAAATCTTTAAGCCAGCAGCAGCCTTCCTCCCCGAGTGGATGGGCATCCCCGCAGACCTGTCCCCACTCCTTAAGCACTAACAACCAGCCTGTCCTTGGTCCCATTTCCATCTCAAGGCAGAAGGAGTCACTTGGTACATCCCAGGAAGGGCCTTCTACTGGGAAGATGTGTGCCTTGGACTGCCAACGAGAACTAATATGTGCAGAAAACGTATTACATGTTAGATACAAGTTCCAACATTCATTAACAGCTCAGACATTATCAATGGCTCCTGTTCCTGAAAACTAACAGGCCTTCACCTTTTTTCAGCACAGCTGTCTCATGGTGCCAGCCGGGCTGCCACCCACAGACAGTCTCTTCCAGAGGCAGCAAGAAAAGGTGTGTTATCGATTTTACTTTAGGTTCCTTTTGAAGGGTAAGGCAAACTCTTGTTTATACACTTTTTGTCATTAGCATTTCCATGGCGGGGCAGCATGCGACAGGCAATAACCATGTAAGGAAGCCTGAGAAAGGAGAGGAGGCTGGCTTGCTCTTTTTATAGCAACTGCTTTTCACCAACTGACAGGAGTCTGCTGAGAACTGCTAACCCCTTTGAAAGTGGTGCCTTCAGTGACCTCAGAACGTCTTATCATCTGTTAAGATTCTTTTTTTTTTTTAATTATGGATATATATGTGGGTGTGTGCAGTACCTTCAGAGGCCAGACCTGGGCGTTGGGTTCCTGGGAACTGGAATCATAAGCAGCTGGCTCTGCCTCCCGAAGGTCTCACCGACAGTGGACCAAAGGCCAGGCCAGTGAAAGCCACACCTCTCCAAGCATCCAGCCAGCTCTTCTGTCCCCTTGACAAGAGTTGTGTCACCGTGAGCTCACGTGGCTCATTATGAGTCAAGGGGAGGGAGAACGCTGGGATTGGTTTAGCCTAGGATCCAAAATAGGAGTTCTTCACTGCACAGATCAAAAGGGATGCGGGAGCTACCGTGGACCCACAGTCCCCTCACCAAGTTGCTTGTCCTTGGGACTTTGCCTACTCTGTCCATCTGAGAAGAACTGAGTGAGTAGAATTCAGATGCATGTCCACTTCTGTAGCCCTGGCCGGACACCCCAGGCCTAGGGAACTCCTCCAGATGTTTCAGAGTGTCTTACCATCTTGTTAAACTTCACGTGTGAACACACATCATGCTATCTCTCACACAATTAAAGAATACAACCTATGTAGCCACCATTATGAAAACAGCCAGGGTGATGCAGGGGGCGGGGGCGGGCGGGGGAAGAAGCCTTGCAAAGGTGTTAGCTCAGGACAGCAGAATCCCAAGGTGTCTCTCCAGACCCCCTGCTAAATTGGAAGTGCTGATCCTGTGCATGAGAAGTAGCCTGGAGTGGCCACGGTGGCACCTGCCTTTCATCCTTGCACTGTGAAGGCTAAGGCAGGAGGCCAGCCTGGTCTATATCCTAAAACCCTGTCTCAAAAGATAAAATTCTCAAACTGGGTATAGTGGTGCACAGCGGTGGTCCCAGCATTAGGTAAGTGCAGAAAGATCAAGAGTTGGAAGTCATCCACAGCTACACGGAATGGCAGACCAGTCTGAGCTGCATGAGAAGCCCCTTACCCCATCTCAGAAACAGAAAGAAAATTACAGAAATCTAAGCTCCGCAGTGGCAGTATACACTCAGGAGGCAGCGGCCAGTAGATCTTTGGGTTTGAGGATAGCCTGGGCTACACAGAAGTCCTATGTCACGAATTTTTTTTTTTTTTCAAAATCCAAAACAAATAAAAATGTGCCTCTCCATCACAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000055978:ENSMUST00000069800:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0153111=Glyco_transf_11=WD(100=91.4)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types