MmuINT1023081 @ mm10
Intron Retention
Gene
ENSMUSG00000054942 | Miga1
Description
mitoguardin 1 [Source:MGI Symbol;Acc:MGI:1924567]
Coordinates
chr3:152322350-152333617:-
Coord C1 exon
chr3:152333481-152333617
Coord A exon
chr3:152322477-152333480
Coord C2 exon
chr3:152322350-152322476
Length
11004 bp
Sequences
Splice sites
5' ss Seq
TCCGTAAGA
5' ss Score
6.41
3' ss Seq
TCCATTGGCCTTCATTTCAGGTC
3' ss Score
9.52
Exon sequences
Seq C1 exon
GTTCGAGTTGCTCCAGCAGTCGGCAGAATCTGACCTTGTCGTTAAGCTCCACCAAGGAGAAAGGATCTCAGTGTTGCAACTACCCGAATGGAGGGCTTCTCAGCAGATACTCGGGCTCTGCCCAGAGCCTGGGCTCC
Seq A exon
GTAAGAAGAGCATATGTGTTGTTGTTGTTGTTGTGTTTGCTTACGTATCTCTTACTAGCTTAACTATCACATACGTGCTGCTTTTCCTTATGGGAAAAGCTTAGGAGACAGTCTGGGTAAGTCTGTTTCCTTCCACTGCTGGTTCCAGTTGTGTAAAGTGCTATGGTCCATTTGGTCCTGTGAGGACAGCCTTGATGTGACTCTGTTGATTCAGAGGTAGATGCAGGCATATGTTTTCTTGGGCTGGATATGATAGCTGGTGCCTGGGATTCCAACAATTGGGAAAACGAGTCTCCTTATGTTCTCAGGCTCGCCCTGTACTCTTTGGGCTCAAGTCACTCTGCTGCTTCAGCCTCCTGAGTAGCTAGGACGGCTGAGTCATGGAGCGTCACTATGCCCAGTGACAAGATTCTGGCAGAGTAGGAGCACCTAGACTGGAGGCTTGCAAACCTGCAGTTCTGTGAAGCAGAACAGGGCCAAAGACTTCTGTAACCCTGACACCCTCAGCTGACACCCTCAGCTTCAGGCACATTTTCCCCAGTGAGCGTTAAGCTGCTTTTCTTAGCAGAGGCGGCTGTAGGGGAGCAGTCACGCCTTTGCTCTTGCTCAGCCAGCCTTGCCACTCCTCCACTACAGCTGTGAGGCAGCAATGAATACTTAACTGAGGATCATGACACAGAAGACAGGGAGGGTCTAGAGCCACAAAACTTGATAAATGGGGTCAAGGGAGCTGATGGCTCAGTGCTGAAGAGCAAGCACTGCGCTCTTGCAGAAGCCTGAGTTTGGAGCTCAGCGCCCGTGTGCAGTACCTCCTGACCACCTGCACCGCCCGTGTGCAGTACCTCCTGACCACCTGCACCGCCCGTGTGCAGTACCCCCTGACCACCTGCACCGCCCTTGTGCAGTACCTCCTGACCACCTGCACCTCCAGCTCTAGACGATCCAACACATCCAGGCCTCCATGCAAAGCTGTACTCAGTGCAAACAGCCGGACAGACACACATGCATACACATAAATAAGGATAAAAATAAACTTCAAAAAATGAAATCTAGAGATATGGCAAGAAATGTTTTAAAATGACTTCTTTTAATTTGAGAAATTTGAGAAGTATTGATGAGAACAGTGCTGAACTCAGGACACACTCAGTCTATGATGCCAGCAGGAAGTGAGTGGAGTCGCCATAGGCACAGAGACGAGAGCTAGGGTCTCTCCAGAGAACAGAGCTGAGTTAGGGACCAGGCTCAGGTGCTGGTGGCTGGCATGGCTGGTGTGCTCAGCATTATTAGACAGGAGACATTGAAAGACCCCCCCAGGTGGGCAGTCAATCAATCTGAGGAGACCCTCCCAAGGATCAGCGAGTCCACGATTCGGATGTAAACAGCAAGAGGCTTTATTGGGAACACGGGTACCCGGGCGACTCAGTCTATCGGAGGACTGGCGCGCCGAGTGTGGAGTTTTTACCCTTTTTATAGGGCTAGGGCTGGGGAGCAAAAAGCGCGGTTACAGAAGCGAGAAGCGAGCTGGTTGGTTAGTTCGAATAAGGTTTGGGGTACTTCCCGGTCATTTGGGGAAACTGAGGTGGGACTTTTTAGATCTAAACAATGTCTATTTTCAAGAAATGGGTAGGGGAGGGGTACAAGGAAAGAGTCTAATGAAGGTTCAGCAATGGGCACATATCTGGTCAGAACATTGGCAGACACACAGGTTCAAGGAGTGACCAGAGCACTGTGCACCTCTATTTTTCTAAATCAGTGAAGCTAGTTCTGCTAACACTGACGTCTATCGGGGCTTCTGTGTCTGTTGCTGGTTCCGCTTTATCTGAGAACCATCTGTTCTTGGCCCTGAGCCGGGGCCCAGGTGCTTGATCACCGATATCCTGTTCGGCCCCTGTCCCAGTGCTATTCAGCCTTGATCTTTAACTGTTAATCTATAACTGAACTTCCTTGTAACTTTTGAGAACCCAGCTCGGGTACTTTTTCATGCCTTGCAAAATGGCGTTACTACAGCTAGCTTGCTAAGCCTTATGGTGGGGTCTTTCATTCCCCCCTCTTTCTGGAAACTGAATAAAATCTTTTATTCACGTGATTCCACTTCTTCTGGACCTATTGATTTGAGTTGATGATACTGTTGGGTCAGAACCAGGGTCTGCACCACCGAAATTCTGTCTTTTACAAACTGGACCAAGCGGTTGAGAATACAGGGTCCGAAGAGTAGGATTAATAAGAGTATTATCAAGGGGCCCATAATGGTGGATATCAAGGTCGTGAACCATGGGGACCTGTTAAACAGTCCCTCAAACCACCCTTGTCCTGATTCGAACAATTTTTGTCTCTGGTTTAACCTTTCTCTTAGCTTTGCCATGCTATCTCTCACTACGCCAGTGTGGTCCGCGTAGAAACAGCATTCTTCTTTTAGGGCAGCACATAATCCTCCTTCTTTTAGGAACAGTAGATCTAATCCTCTCCGGTTCTGTAGGACCACCTCAGACAACGAGGTCAGAGACTTTTCTAGGGCACTGACTGATTTTTCTAAGGCCCCAAGGTCTGTATGTATGGCTGCCTGGAGCTGCTCGAATTGCTTGGTGGCCACTAGGGCTGTAGTCCCTGTTCTTACTCCTGCAGCTATGCCGCCCATAGTAAGTCCTCCCAACAGCAGGGCCAGAGTTAATGACACCGGCTCTCTTTTATATTTGGTTTTTCTCTCAAACTGGCCATAAACATAACCAGGGGAGTGGTAGGTCACCTTTGGCCAGAGCTCAACCAGGACACAGTAATCGGTGGTGAGGTTGAGTACAGTAGTAGATAGGCAGGGAGTGAGCCCGGTGTTGCAAGCCCAAATGGTCCCGGCGGGAGCAGCCAGATAGTAGGACCCGTCGCTTGTATTCTGGGTGGTATTACACAGGGCCTGATGGGTTTTGGGAACTGCTCCTACGCAGAGTCCCTGTCCGGTTACTTTGGACAGGGTCAGCTTGTGTTGGGAGGCCACGGAGCAGTTAGCTGGGGCAGAGGTATGGTTGGAGTAGGTACCTAGGACGGCAACCCCTTCGTAATAGGGGGGTCCCGATACCAGACACAACCAGCACTCTTGGGTTTTGTCAGGACTGGTGAGGTTGAGTGCTTGGTAGGCTCCATCTACCAGGTTCAGCAGTCTGTCTCCCGTCCCAGGTTGTATAGAGGCTGCGCCTGTAGGGGAAGGCTGAGGAGGCCTGGGGAGCATGATCTGCACGGGTCGGGAGGGGGGTAACTGGTCAGTGATCACGGGATTAGGCCCAATGGGGATGCGGGGCCCTATATTGAGGACCTGGCGGGTCAAAGAGAACCGGGTCACCGGGTCGGTTCCTGTGGATCGGTACAGTCTTAGTCCCCATACTTTGGGGCCATCCCAGCTGGCCTTTTTACCCGCGTCAGTGAATTCTAGGACTAGGGGATTGCATCGACCCCCCGGTGTGGCACCCTGGATGCCACTGGAGACCGCTGAGGAATCATAACAGGGGCCCTGATTCCGAGGGGTGTTTCCTCGCTTAAGGGAAATTAGGTCCCATGATGATGATGGCTTCCAGTATGCCTGTCCAGTGGTCTCACAGCCCCATTTGCCACAGTAGCCCTCTCTCGGGCCTCCACACCCTGTTGGTACAGTATGCCCGGGGCAAACATAGAAGTCAAATGTTCTTGCCCTTTTTCTTCCCCCGGGAGTGCGACACCCGAGTCCAGTCTCATCCCAGTCGTCCCCTATTAAGTCGCACAAGTCAAAGTACAGTTTGGGAAAGGCATCGGTCATTGTCCCCAGGAGGGAGGTAGCATTAGCTGTTTGTCCTGTCATTAAGTTGGTAACTCTCCAAGTAACATTGAAGACCTGATGAGGGCTGTCATGTGGTACTGATACTCCTGCCCTTATTAAGATCCCCAGGACTATCAGGGGGGCCCACGGGTTAATCTTATCTTTAAAGGGTTTTGAGAACGCTGGACCTTCCATGTCGGTCCTGATGCTGTTCCGGCCGGAGGGGTTGTCGCCGCTTTTACGTGAGCGGCGTGGATCCACGCAGCGATGCCGTCTACTTTGAGAGCGGTGGGGGTGGTCAGCAGGACGGTGTAGGGTCCTTTCCAGCGAGGTTCCAAGTTCTTAGTCTGGTGCCGGCGTACCCACACGGTGTCGCCGACACGGAAGGGGTGTGGTATCACAGGCTGGTCTTGTTGGTCCTGATAGGCAGCGGCCAGAGGCTTCCAGACCTCTCGTTGTACCGCTTGGAGGGCCTGTAAGTGAGCTTGGAGAGAGGGGCTATTAGTAAACTTTGACATTTCAGGATCATGGAAATTAACAAGGGGCGGGGGCGCCCCATACAGGATTTCATACGGAGTGAGTCCATGGGGGCCCGGAGTGTTGCGGGCTCGGTAGAGGGCCAAGGGAAGTAGGAGTACCCAGTCTCTAGTGCCAGTTGCAAGCGTTAATTTGGTCAAAGTCTCCTTGATTGTCCTATTCATTCTTTTTACCTGACCTGAACTCTGGGGTCTGTAAGCACAATGTAGTTTCCAATCAATCCCCAGTAGCTTGGCCACCGACTGACTTACCTGGGAGACGAAGGCAGGCCCATTATCAGTCCCCAATACTTGGGGCATTCCAAACCTTGGAAATATTTCTTCTAGAAGCTTTTTGGTCACAACTTTGGCAGTCTCATGCTTGGTTGGGAAGGCTTCCACCCAGCCAGAGAACGTGTCCACAAACACCAGAAGATACTTATGCCCATACAGTCCGGGCCTTACTTCAGTAAAGTCAATTTCCCAATGGGTGCCTGGTCGATGTCCTCTTACTCGCACCCCGGGACCGACCTTAGCTTTACTGGCATTTACTTGGACACAGGCTTGGCATGATTCCGCCACCTCGTGGAGGATCTTATCTTTATTTAGCATGTAATAGGGGCTTTCTTTTCTGTCTAGAAGTGCCCTCATCTTCTGATAGCTAAGGTGGGTGAGCTGGTGAAGGAAGTCTAATAATTCAAAGGTGAACTGGTCAGGCATCACAGGTTTACCTTGCAGGACCCAATATTTTTTCTCTCTATCATATGTGGCTCCCAACTCTCGTAGGTTCTTTATATCTGTTTCAGTATAATGGAAGAAGTCTGGAGTGTACGGGGTTGAGGTCTCTATGAGAAGTGAGGAGGCCTTTGTGTCAGTCCCCATGGCTGCTTCCCGGGCTGCCTGGTCCGCCATTCGGTTGCCTTTAGCTTCAGCACTATTGCCTTTCTGATGTCCTGGGCAGTGAATTATACTGAGTCTTTTGGGCAGAAAGAGAGCTTTCAGTAAGGCCAAGATTTCGCCCTTGTTCTTGATCTCCTTGCCTTCTGAGGTGAGCAACCCACGTCTCCTATATATTTCTCCATGGACATGGGCGGTAGCAAAGGCATAGCGGCTATCAGTATAAACATTTAGCTTCTTACCTTCTGCCATCTTTAGGGCCTGGGTGAGTGCTATTAGTTCAGCTCGCTGGGCGGATGTCCCGGCTGGCAACGCCTTGGCCCAGATTACCTCGGTCTCGGTGGTCACCGCTGCTCCAGCCTTACGTTGCCCCTCCTGCAGGAAGCTGCTTCCATCTGTATACCAGGTGTGGTCGGCATTTGGGAGGGGCTGGTCCGTGAGGTCCGGTCTGGTGCCGTGTGTCTCAGCCAAGATCTCGAGGCAGTCGTGGGGGGTCTCTTTTCCCGGCAAGGGGAGCAACGTGGCCGGGTTTAAGGCTACCACCGGTCCGAACTGAACTCGGTCCGTATCTAGGAGCATTGCCTGATAGTGGGTCATGCGAGCATTGGATAGCCAGCGGTCAGGGGGTTGTTTGACCAGTGCTTCTACCGCATGGGGGGCCAGAATGACTAGCGGCTGTCCCATAGTTAGCTTGCCTGCATCCTTTGTCAGAACGGCAATGGCTGCTACCATCCGTAGGCAAGGGGGCCACCCAGCTGCCACTGGGTCTAGCTTTTTGGACAGGTAGGCCACCGGCCGACGCCAAGGTCCCAGTTTTTGCGTTAGGACGCCTTTGGCGTAGCCCTGCTTCTCGTCGACAAAGAGTTCAAAGGGCTTAGTCAAATCTGGCAACCCCAGGGCTGGGGCAGTTAGAAGAGCCTGTTTGATTTCTTGATAGGCCTTTTGCTGGTCTGGGCCCCAATTAAACAGAGTCCCCGTTTTGGTGAGAGGATACAAGGGGGCTGCCATTTCTGCAAACCCAGGGATCCAGAGGCGACAGAAGCCTGCCGTCCCTAGGAACTCCCTTAGTTGTCGAGGGGTCTTCGGAATAGGCTGCCCCATCACAGTCTCTTTTCTGGCCTCAGTCAGCCATCTCTGACCCTCTTTTAGAAGATACCCCAGATACTTGACCTGTTTCTGGCAAATTTGGGCTTTCTTGGCCGAGGCCCGATACCCGAGGTCCCCTAGGGTTTGTAACAGGGCCCGAGTACCTTGTTGGCAGTCGAGCTCAGAAGTGGCGGCCAGCAGTAAGTCATCCACGTACTGTAGCAGGATCAAGTCTGGGTGCTGGATCCGGAAGCCTGCTAGGTCTCTGTGCAGTGCCTCATCAAACAGGGTGGGACTGTTTTTGAAACCCTGTGGGAGTCTGGTCCAGGTTAATTGTCCTGAGATTCCCATCTCTGGGTCTCTCCACTCAAAGGCGAAGAGAGGCTGACTGGTGGGGTGGAGTCTCAGGCAGAAAAAGGCATCCTTTAAGTCAAGCACAGTGTACCACTGGTGGGACGGTGGGAGCCCGCTCAAGAGGTTGTAAGGGTTGGGCACGGTGGGGTGGATGTCTTCCACCCGCTTGTTGACTTCTCTCAGATCTTGGACAGGCCTGTAATCATTAGTCCCTGGTTTCTTAACGGGTAGCAGGGGCGTGTTCCAGGGGGACTGGCAGGGTACCAGTATTCCCTGGTCCAACAGTCTCTGTATGTGGGGCTTGATCCCCAGTCTGGCTTCTTGTGACATGGGGTATTGTTTTATGGACACGGGGGTAGAGGTTGCCTTCAGAGGTATGATCAGAGGAGCTTGGCGAACTGCCAGTCCCATGCCCCCGGTTTCCGCCCAGGCCTGGGGAAAATCAGAAAGCCATGTGGACCCTAGAGAAACATCCGGCTCTTTTGAGGTCTCATGTAGCCGATACTCATCTTCTATGTTTAGGGTCAGCACTTGCAGGGGCTGTCCCATTGGTCCCACAACCTGAGCTCCTGATCCCTCAAAGTGGATTTGGGCTTTTAGTTTAGTCAGCAAATCTCTTCCTAGCAGAGGATAGGGGCAGTCTGGTACATGGAGGAAAGAGTGGGTGACCTTACCGGTAGCTAGATGCACTTTGCGATCCGTGGTCCAGCGATACCGCTTTCCTCCAGTAGCCCCTTGGACCCAGGCAGACTTGTCACTTAGGGGTCCAGGATTTTGGGTCAGCACGGAGTGTTGGGCCCCAGTATCCACCAGGAAGGTGACGGGTTGCCCCCCGACTTTGAGGGTTATCCTGGGTTCAGGGGGGGGCTCCTGACCCTGACCTCCCTAGTCACCTAAGGTCAGGAGGGAGGTCTGGGGCCTCGGTCCTCGGGGCCCTCGTGGCTTCTTTGGGCAGTCTTTAGCCCAGTGTCCCTTTTCTTTGCAGTAGGCGCATTGATCCTTATCAAGTTGGGGCCTCTTCCGCTCTCCCCCCTGTCTATCCTGTCTCTGACCAATAACTACAGTGGCCAAGAGCTTGCTCATCTCTCTATGTCTTCTGCGGTCCCTTTCTTTCTCTTTCTGCTCATCCTCTGCCCTACGGCGTTCTTCTTTTTCCTCTGTTTCTCTCCTGATACGTTCCTCTCTTTCTTCCGGGGTTTCTCGTTTATTAAAGATCTTTTCAGCTTCCCTCACTAAGTCTCCTAAGGTCTTGCTCTTTAAATCTTCTAACCGCTCTAACTTTCGCCCGATATCCGGGGCAGACTGCCAGATGAATGACATAGACACATTGGTTTCTTGCCCTGGGTCCTCAGGGTCATAAGGAGTGTACCTGCGATAGGCCTCCTTGAGTCTCTCTAAAAAGGCTGAGGGAGACTCATTAGGTCCCTGGGTTATCCCTTTTACCTTGGCCAAATTGGTGGGGCTTCTGCCCGCGTTTTGGAGACCCGCTAAGAGCAACTGGCGATAGAGGACTAGGTGGTTCCTACCTTCTGTAGTGGTGTAATCCCAATCAGGGCGCTCAAGGGGAAAGGCAGCATTGATTTCATTAGGCAACTGAGTGGGGCGTCCATCATTGCCCCGGACTGCCTTTCTAGCCTCTAGGAGCACCCGCTGCTTTTCTTCTCCGGTCAGCAGGGTCCCCAACAACTGCTGACAGTCGTCCCAGGTGGGCTGGTGGGTGATGAGGACGGACTCAATCAAGGCCGTCAATTTACCTGGATCTTCAGAAAAGGAAGGGTTATTATTTTTCCAATTATATAAGTCAGAGGAGGAAAACGGCCAGTACTGAAGCTGGCCATCTCCCCCCATACGGAGTGGGAATGCCTGGGAGGAGGTGGAGTCCGCTGCGGGAGGGTCTCTCCTTCCCCGCAGTCGAGACGCCATGGGAGAAGGGGGGGAAACCTCGGAGGTGGTGGCCGCCTCTTCTTCATCGTTCTCTCTGGCAGAGGAGGAAGGTTGTGCTCCGTACGGCGGGGGGTCCTCTGTGAGAAGGTCAATGAGAGGTCCGCCGCTATCAGGGAGAACCTGGGGCTTAGGAGGTTTGGACTTTATAGAGGGGGTAAGGGCAGGGTAAAGGGCAGATCGGGACGGAGGTTGCGCAGAAGGACCGGGCGGGAGGACGGGAGCTGTCGGCAAGGGAGGAGGTTTAGGAGAAACAAACGGTTTGACCCACGGAGGGGGGTCATAGGCAAGTGCCTCCCAGGTAACGATATATGGGACCTGATCCGGGTGTCCGTGGGGACCAGGACAAAACACTCTAGACTTAACCTGAGAGATAATACTTAAATTGAAAGTACCATCCTGAGGCCATCCCACATTGAAAGTTGGCCATTCGGCGGAACAGAAGGTAATCCAGCGCCTCTTCCTGACATCCACAGACTGGTTGGATGCAATGCGCTGGACATCTCCCCAGTGCTGCAAGGTTAGACTCAGAGGGGTAGTTACGGTCTGTCCCATGATCTTGAAAACACTTAAAGACAGAAAAAACTAACGAAGAACAAAAGAGCAATAAAACAAATCAGACGCGCAGCGCGGTTTCGGCGTAAAACCGAAAGCAAAAATCCAGACGGGGGCGGGAAGTGTCTCTGTCTCTCGTCCCCCAACAAAGCCACGTACAGTGGCGGAGCTCCAAAAAGTCCGACTCGGGTAGGTTAACTGATACAGAATGGGCCACAAAACGGGCCCCCGAGGCCGCTGGGACGTCTCCCAGGGGCTGCGGCCGGGAATACGAACTCGTCAGTTCTTCCGCGGAACCGCCAGATACAGATCTAGTTAGCCAACTAGTACAGACGCAGGCGCAAACATTAGATGCCGGCACAAACACGCACGGAGACAGAGACAGACACGAAACGACCGCTGGCCAGCTTACCTCCCGGCGGGGGTCGGTGGTCCCTGGGCAGGGGTCTCCTGATCTCGGTGGAACCTCCAAATGAAAGACCCCCCCAGGTGGGCAGTCAATCAATCTGAGGAGACCCTCCCAAGGATCAGCGAGTCCACGATTCGGATGTAAACAGCAAGAGGCTTTATTGGGAACACGGGTACCCGGGCGACTCAGTCTATCGGAGGACTGGCGCGCCGAGTGTGGAGTTTTTACCCTTTTTATAGGGCTAGGGCTGGGGAGCAAAAAGCGCGGTTACAGAAGCGAGAAGCGAGCTGGTTGGTTAGTTCGAATAAGGTTTGGGGTACTTCCCGGTCATTTGGGGAAACTGAGGTGGGACTTTTTAGATCTAAACAATGTCTATTTTCAAGAAATGGGTAGGGGAGGGGTACAAGGAAAGAGTCTAATGAAGGTTCAGCAATGGGCACATATCTGGTCAGAACATTGGCAGACACACAGGTTCAAGGAGTGACCAGAGCACTGTGCACCTCTATTTTTCTAAATCAGTGAAGCTAGTTCTGCTAACACTGACGTCTATCGGGGCTTCTGTGTCTGTTGCTGGTTCCGCTTTATCTGAGAACCATCTGTTCTTGGCCCTGAGCCGGGGCCCAGGTGCTTGATCACCGATATCCTGTTCGGCCCCTGTCCCAGTGCTATTCAGCCTTGATCTTTAACTGTTAATCTATAACTGAACTTCCTTGTAACTTTTGAGAACCCAGCTCGGGTACTTTTTCATGCCTTGCAAAATGGCGTTACTACAGCTAGCTTGCTAAGCCTTATGGTGGGGTCTTTCAACATGAACAGCAGTGATGCAGATCTGCGTATCATCTAACAATGCCCAGAATCCCAAAATGCAGAGCGTCTAAGTATCTTACAGTTGGTAGAGAGAGAATTTCTAAGTGCTAACACCAGAAAGATTTATAAAATACCCATCTTATTTTTTGTGAAAATATTAATTTATATGAATTCAAGATATTGTGCTACTTGTATATTTCTAAACAATAGGACCAGAATAGTTAAAAATCACATAAGTACTAAATTTGAATATAATCAGAATTATTTCTTCAGGTAGAATTTACTGGGACTATAATTATAGGCCATATATAAATAATTGGTAAATATACAGTACAATAGCAGATTTGGCATGGACTTCAGGAGAGTGCTAACCTAGCATGCCTGAAACTCTGGGTTCCATCTGTAGCACTGAATAAAAACCAGGTGTGGTGGTACACACCTGTAATCCCAATCCTTGGGACAGAGGCAGAAAAACGATGAGAAATTCAAATTTATCCTTGGCTATTTAGGAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTATCTGTCTGTCTGTCTGTCTGTCCATATCTGTGTGTCTTCCTATCTGTCTAAGAGATTTTGAACTGCTCTCCATTGGCCTTCATTTCAG
Seq C2 exon
GTCCAGAGTGTTAACTCCTGTCATAGTTGTGCTTGTGGAAATTCTAATTCCTGGGACAAAGCAGACGATGATGACATCAGACTTGTTAACATTCCTGTGACCACACCTGAGAACTTATACCTGATGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000054942:ENSMUST00000073089:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.041 A=NA C2=0.023
Domain overlap (PFAM):
C1:
PF102654=DUF2217=FE(16.0=100)
A:
NA
C2:
PF102654=DUF2217=FE(14.9=100)
Other Inclusion Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types