RnoINT0017409 @ rn6
Intron Retention
Gene
ENSRNOG00000053288 | Ank3
Description
ankyrin 3 [Source:RGD Symbol;Acc:620157]
Coordinates
chr20:20358748-20380823:+
Coord C1 exon
chr20:20358748-20358810
Coord A exon
chr20:20358811-20380699
Coord C2 exon
chr20:20380700-20380823
Length
21889 bp
Sequences
Splice sites
5' ss Seq
AAGGTATTT
5' ss Score
7.64
3' ss Seq
GGCTTGTTCTCCACCTGCAGGTG
3' ss Score
10.84
Exon sequences
Seq C1 exon
TTGGTAAAGCCAGCGCCCCCGAAAAGCTCAGTGATGGGGAATATATCTCAGATGGTGAAGAAG
Seq A exon
GTATTTGCACCTCTCTCTTGCAATGAGACTTATCTCCCCACTCCAACTCTCATTTCTTATCTCTGAAAAGTAACGCTTCCTCGAGTTACTAACTTCTCAGTCATCACGGGAATTAATTTGGGGGTCATTTAAAGGCTCGCCTGGGGTCTATCTATCCTCTTGCAGACCTGATTTCTTAAGCCCACTTCCCACCATGACGCAGAAAATAATGTCACTAATTGTAACGGTTACCCTGTCTGCTGTCACTATCGAGCAGAAAACTGAAGCTTTATTGTTCATGTCTGAATCTAAAAAGGGGCAGCTTACTGTCTATAGTTGTCTCGTTTGGTTTTTTCCTTAGTATAGAAGGCTTCCTTACAGGTTGTGGGGCGAAGGCCCACTCGGTAGTGCGCTTTCTACAGTAAAATCAGGTTTTGACCTTGGGACTAAGCACAAGAATTCAACCTAAGTAAAACCACCCTTAACTCTGGACTTGCAACAGGGACTTGATAAAGAGACTGACATACAATACAGCTGTTTGTCACATGCTCAATAAAGCTAATGTTTTCTGCTTCATTCAAAAGAATGGTACTCTTGACCATGTCCTTCACATATATATGTATGTGTGTATATGTACATACACACACATACACATATACAGGTGCATATGACATGTTTGAAAGGTCTGTTGGAAAAGTAAATAAATATTGGAAGGATGGCAAATTCTGGAGCTTCACTGAAATAATGAAATGCTTACTGTATCCAGTGTATGTGTACTGATTTATTTTGTTGTTTGTTTGTTTGTTGAGAGAGGGTTTCTCTGTGTAGCCTTTCCTGGCTGTCCTGAGCTCACTCTGTAGACCAGGTTGGACTCAGGCTCAGAGATGCATTTGCCTCTGCCTCCCGAGTGTGCCATACTGCCTAGTTTGTATGTTCAGTTTTTTAACGTTTGAGACAGTCTAGCCTTGGCTGTCCTGGAACTTCTCCTGTAGACCAGGCTGACCTTGAACTTAAAAGATCAACTTGCCTCTGCCTACCCAGTACTGACATTAATGGCATGTCCTTCCCTGCCCTTGACTTTTTAATTTGATTGATTGATTGATTGACTGATTGATTGAATCAGTTTATCTTCTAAAATAATTGTCTTCCTCACTACTCCCCAACACACCCCCTTGCCAAGCATTTTCACACACACACACACCCCTGCTAGTATCAGTCTTAGAAGGATTTTAATTATTGGTTCCTTATTTGACTTGCATAAATTCACTGGGCGTAAGTAGTGGGATGGACAATCTACCTGATGCCAAGTAGCCGTAACCTTGGTGATGTCCACTAGCCACTTTGACTGGCAGCACAGAGACGCTGGTGACTGGAGGGGCACACGTACAGGCAGAGCAACCTGAAGTTGTGTCAAGACTCTTGACTGTCTAGCACAATTGGTTTTAACACTTGCATTCTTCCAGGCTTTTGTCTCAGTTGTGTGTCTTCCACACAATGATACCGGTTATATCCTTGTAAGAGATCTCATGTCTCTCCGTCCATCACATGCTATCACAGCACATTTTCTTGTCACATTTCAGAATAATTTCTCACGTGTACATAATGGGGTTTTAAAAAACAAAAGAGCAATGTGCTCCCTGTGTACAAAACAGGATTCAAGTTTGTCTTCTTAATGAAATTCACGTGAAATACAATCAGTGAGAACCATTTTTCTGCTCTTTCAACAAAATATCCAAGGTTATCACCCTGATGAGAGGCTGGGTTTGAATGGACTGTCTAATGGCTTTGTGTATATGGATCAGCTATCAAATAGTTTCAAAGCATGAGAAAATGGAAACTCCCAACTTTAATTCACTCAATAAAGTAGAAATGACAGTCATTTCCTTTAGATTTGCAAACTTGAAATTCAGAGTGGCTTATCCTTATCACTTTGTCTTTCTTTAAACTCTGTGTTCTGTCCTCTGAGGGGATGTGATTGAATCGCTGGAGTTACCTGGGGTTTAATTTTATAATGTTGTAGAACCAGCTATTGCAGAAGGTCCTGAAGGTCAGTCTCCTAGAACATCTCTGTAGCTAGAGCTTTTGCTAGAACATTCTTTGCCCAAACGACTCAAATTGCCCCTCTTCAATGTGAATTTCTTCTTTAAAAGTCTCCCACCTCGGGGTTGGGGATTTGGCTCAATGGTAGAGCGCTTGCCTAGCAAACGCAAGGCCCTGGGTTCAGTCCCCAGCTCCGAAAAAAAGAAAAAAAAAGTCTCCCACCTCAACTGCCTTCAGTCCTTAGCACTCAGGAGGCATAGTGGGATTTCTGTGAGTTCAAGGCCAGCCTGGGACAAGTTCCGGGACAGCCAGGGATACACAGAGAAACCTTGTCACGAAAAACCAAAACCAAACAAACAAATAAAAATCAAAGCTTAAATAAAATAAAAGTTCCCCACTTCCTTGAATCCCTCTGACTTCTATCTAGCAATTCTGGCTCTGATGTATTTGGCCAGGCTGATGTGTATGTTGGGTTTCGTTAATTATTTACAATTAAAACCTACTGTCCCATGTCCTAGACCTTGAAGGATTTGAGATATTGATATTTTAAAAATTATATTCAATTATTGTAGTTGTGGGAGGGATGTGACACAGACATGGAGAAGTGTCTCCATGGGGGAGAGGGGGGGTAGGATGGGGGAGGGGGGGTGTGACAGAGGGTATGTACTGTGCAGAGGTCTGAGGACTACGTGTGAATAAGTTCTGTCCTTGTACCTTGTAGGACCTGAGGGACCAGCCTCTCGGGCCGGCCAGTTCAGGCACCTTTGCATGCAGAGTCAGCCTTCCTTCAGGTGCTGGAAAGTATTTCCAAGTTCTCAGCTTTGTCACCAGTCAGGACAGTCACAGGCACTTCCTGTAACTGCTCCCCTCCTCAACAAGGTCATTCTCCTGCATCCGCTTTCACTTGCATATGTCTGTCAGGAATTCCTGTTTCTAAAGTGGAGCACAAGGCTCGAGCTGTAGTCCGATCAATACAGAACTACATAGCAAGGCAAGTGTGCTCACTTTCTCCAGGGAGAGGATGACATTGTGTCATTGAGCCAGGTCTGGTGGCTCGCACCTTTAATCCCAGCACTCGGAGGCAGAGGCAGGAGAATCTCTGTGAGTTTGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTTTCTCAAGACAAACAGAGAGAGAGAGAGACAGACAGATGGACATACAGACAGACAGACATTGGTAATTCAGCCACTAGCTGGATATGGTTGTACATGCCTTTAATGCCTTTACCCCTTGGAGTTTGAGGCCTGGTCAGTGCCATTTATAATCAACACATATTGGCAGTTTATCTCAAGACAAGGATGGGTCTGTGCTATGAGAAGTAGTATAAACCCTAAATTAGGAAGAAATAGATGTTAAAGGGTTAACATCAGGCAGTTTCTCCCTTCACCATCTTCTCTTTTGCTTCTTTCTCTTTCTTCTGGTCTTCTTGGAGAAATTAGTTATAGGTAAGACACATTTGTTTAACGTTTGGGTTAGTTAGTTAATGCCCCAGGAGGACAATGGAGCAGCGATACAGAGAACAAAGATGGCGGCGTGAACAGAACCAAGGCTACAGGAGACAGCTTATGCAGAGCAGGGAGACCTGGGGGAGTGCACTCTGCAGGAGGCCCCGCCCCCACCCCGCGCCATATCCATTGCATACACAGACCCTTCCGGTACAGAGGAACTATCATCTTTATTCTACTGCCATTCCCATTCCTATATTTTGCAAATGAGTCTGTAGTTGAAAATAAAGAAAGAGAAAGAACAAGGAAGGAAAGCAAAGGGGAATGACAGAGGGGGAGAAGGAGAAAGAGAGATGGTGGAGGGAAAGAAGGGAGAGGGGATGATGGAAGGTAGGAAAAATGTTGAGGTCAAAATCAAGGTCCAAGGTGTTTTCTTGTTTGGGTCAGGTGGAGCTGTCACAAGGGGTGGAGCTGTCACAAGGGGTGGAGCTGTCACAAGGGGTGGAGCTGTCACAAGGGGTGGAGCACTCGAAGGGTGGAGCAGTCATAAGGGGTGGAGCTGTCATGGGGGTGGAGCTGTCATAGGGGTGGAGCTGTCATGGGGGTGGAGCTGTCAGGGAATGGAGGGTCAATCATAGGAGGTGGAGCTGTCATAGGGGGTGGGGCTGTCAGGGGTGGAGCCGTCATAGGGGGTGGAGCTGTCCCAATGGGTGGAACTGTCACAGGGGGTGGAGCTGGGCTTTGAGAGATGGCTCGGTGGTTAGAAGCACTGACTGCCTTCCAGAGGTCCTGAGTTCAATTCCCAGCACCTACATGGTGGCTCACACCATCTGTAATGGGACCGATGCCCTCTTCTGGTGAGTCTGAAGATTAGTGACATAACTCCTCCAGTAATTGTGCCAAAGCTGAAGTAAGTCTTAGCCTCAGTCTCCTTCAAATCTAGCTTCCAAAAGATTGCATATAAATATATTAATTTAACAGCTAAATCTCTGGGGTAAGAATCAGACAACAGCTACACAAGAACTGGCTGGATCCTGCCACAGGATGCCCCACCCAGTGACAATGGAGAGAGAAGGCAGACTTGCAAGGCCTGCTGCGAACAAAGAAGTGGGTATGAGTTCCTGGTAAGTTGGATATGAACATGAAGAAAAGAGAGACTCGAAAGCTTCTGCATCGTGGGTGGGCTACTTGGTAGAAGCTTACGATGTTTCTGGAGGGGTTCACTTAGGGCATGAAGGGGTTAATATTCCTGAGAGTGTCTCAAGTGGAAAGACAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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GCCCTTTGTATGCCTGGACCTCCCTTACCTGATAGGTTCTCATGCTTTATACCCAGATAATGAGAACACTGAGATGAAGGAGGACTGGGGAGGGTTTGATGTAGAATGGATAGCTAAGAAAGAATGCGTGGACAAGACCGGACAGGTAGCTCACCTAAAGAGGACCTGTGTTTGATACCCAGAAGCCACATTAAAAAACGGGATGGTGGTGTACACTTGAAATCCCATGGTATAGGCAGCGACAAGGTGGGCTTGGGGCTTGCTGGCCAGCCAGTCAGACCAGTGAGCTCTGAGCCAGCCTGGGGAGGGGTGGGGGGAATGGAGGACAGCATCTGAGGCATGATGTCATCGCCTGTCTTCTGGGCTGCAGGACATCTTTACACATACAGGCTTTGTACACATGAGGACACACAAGCACACGAAGAGAGCAAGTTGGCACGACACTGCTACATGGAGTTTAGCATGCGGTAGCCAGCATTCCAGTCCCAATTCATAGGGCGAGTTTGTAAGTGGCAGCTAAGGCATTGTCTAGTCATCTTTACTTGTGGCTTAGGTTTGACGCAATGGGAACGGGAAAGTGACCTCGAACTCCCTTCTACCCAGACTCCATCTTCAGCTTAAAAGTTTGTGCCCAAGTCAGCGTGACAGCTAGTCCTAACGAAGGTAACCCTGGGAATTTCTACATCAAGGTCAAGCATTGCAACCATGAGAAAATGACAGGCTCTTCCTCCACTTGCTCTCCTCACCTCTCTGTAGAAGACACACTGAATCTCTTCTGCCTTCTGGGATGGGTTTGTTTATTAACTCAAGCAAGATCACAGGGGACATTCTCAATGCCCCATCTAGAGAGCTTCCTGCCCTGAGTCACGTGTGCCAACCTCAGACACCCTGCAGCCTGGATTAGGGAGCAATGAACGGGTGCATGGTTTTAAAAGAGAAACACACCCGGGCTACAAGGAACAGAATCCTTAAAAACAAAGAAAGGAGTTGACTTTGTACTCTTAAAAAAAAAAAGTTGATCACCAGAACAGAGTCATTTATTCCGTGAGGTAATGGCAATGCACTGTTTCAGAGGGGTGTGACCTTGGCTGGTCAAACCCCATTCTTCGTCTATGGCCACCTACAAAGCCAGAATCTTTAGCCAAGACCTAGGAAAAAGTTGAGTGCAACAGGTGGTCCTCCCTGCTGATGACACAGTTCTTCAGGCTTCTAAAATCACCTGTTTAGTCTGTCACTCATTTAGCCAGTAGCTGCCCCCTGTTTTGAGATACACAATGAAAAGGTTTACTCTATTGCCCCATTTACTTTATAGTCTCAGTGGCTGACTCACCTGCCAAGAGATGACAGAAGCCAAGGTTCAAGGAAAGTCACTCCCATTTGCTCATCTGCAGTAGAGGGGACAGATGAAGAAGAAGCAGCAGAAGGCAGAGATACTCAGCCCCTCCCCCTTCTGCTTCTAGCCATGCCTCTGACCTCGTTACAGGGTCCTCAATTAGTGTGCTTGATGGTGCCCGCCTTCTTGAAGGGCCTGGAACACAGACACCACTTAAAAGCTGAAAGTATACTCCACCCACCTCCATTCCCCGCTGGTCTTCTCCTCTGAGTACAGCAGCCTTGCAGGAGTGAGCACAGGCTCTAGCTTCAAACTGAAGAACAGAAAGGAGAGAGAGAGCTGGACTCAGTAGCTTCTTACCTGCTGTTGCTTAACTACAATGGAGTTAGCATTCGGAACAAAAGTGTGGGTGCATCCGGGCCCGTTTTCCTGTCTTCCTCTTCTATGCTTGCTTGTTCGTCTTTCTGCTCGCTTGCTTGCTTGTTTTGTTTGGTTTTGCAGCAAGATCTTACCATGTCTATTTGGCTGCTCTGGAACTTTGTAGACTGGGCTGATGTTGAACTTACAAAGCTCTGCCTACCTCGGGCTCTGAGTGCTGGGATTAAAGACATGCACCGGCACACCAGGCTTCCTCCCTGCTTTCTTGATTATTAAGAATGAAAGCAGTAGAAATAAAGGAGGGCATCATATGAATATCTATTGTTTGGATTTTCTAAGTCATAAATTCATTATTTATTTATATATTGAGATGGGACCTTTAGGTAACCAAGGTCAGTATTTTTTTTTTACAGATAGATTTATTTTTACTTTATGTAGTAAGGTGTTTTTCTTACATATGTGTCCGTTCACATGCATGCCTGGTATCCACAGAGACCAGAATCGGACATTGAACCCCCTGAAACTGAAGTTACAGATGGTTGTCAGGTGCCGTGCAGGTGCTAGGAATGCAACCCAGGTCCTCTGGAAAAGCAGCCAGTGCTCTTAACTGCTAGACCCGTCCCCCAGCCCCTCAGGCCTGTCTTGAGCTCACTATATAGTTAAGGATGACTTGGAACTTCTGACCCTTCTGCCTTCCAGCACCTACTGAGTGCTAGAATTACAGCCTTGTGCCACAACACCCAGTTTATTTGCTGAATGGAGGTGGGAGATAGACCCCAGGACTCTGCCTACTGAACTGCATCCTAAACCCTAGGCCAAACTGCCTTCTCTGAAAGATGAGACTATAAATCTTTAGATACGGTTTGCTTTAATGAGCAGTGCTAAAATATAATCTATATTTTATAGCCCTTATTTGAATCATAAGCAAAAAATACATAACAGATCTTGTTTCTTATTACATTTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGCGCGCGCGCGCGCGCGCATGCGCACATGTACATAATCAGGACAACTAGCAGAAATCAGCTTTTTTCTCACAGTGTGGGTCTGAGTTAAAACTGAGGTCATGAGGCTTGGTGGCAAGTGCCGTTACCCATTAACCCATCTCACTAGACAAGAGATCTTCTAAGAGTTTAGTAACATCTCGCGTAGTTGCCGTAAAGACAGACAGAAATGCCGTAAAGACAGAAATGCCGTAAAGGCAGTGTGGTAGAATACGCTGGCATTGACCAACTTCCTGTCACATGGTACTTCCTGCTCTCGTCAGATGGCCTCACCAGCATCCATCCTGCTTCTGCCTCGGGGTTAGAATTGGTCTTAGAGACGGGGCAGTGAGGACCTGGGTGGGGGTGGTTGGTGCCTGTGAGTTTTCAGTCTAAAAAGAGAAGCGTCTCAACAAAATAACTGCATGTGCACTGATGGATAGATGTTGCCTGCTAGCAACAGTTACTCTAAAACCCTAGTCCAGGAACCTTAAACTCTGGCCCAACCAGTGTCTCCCTGCCCAATTGTCCGTGGCTTCCACCAAGCTTGCACCCAAGGTCCTCGGGACACGCCCACACTTGCCATCCTGTGCTGGGATCTCTACCCGGGAGAGGTCAGCTTCTCTGTGCCCTCTTCATGGACACACACCCCGTCAACCCTGGCAGACTTCTCTGTCAGATGTGGCACCCTCCTTTGAGCACCCGTGGGTGATCTGCAGTTCTCTTGTTTCCCCTCTGCAATTGTATGCATAGAGAAAAAGATTCCAGCCCAGACGCTGCACGGCTCAACATGAGAGCTCCAGGAGGTGAGCTAATGCATTTACATGTCACTCAGGAAAGGGGGAAAGACTGGGCTGGAGAGGTGGTTAAGAATCCTTTCTGTTGGGGTTGGGGATTTAGCTCAGCGGTAGAGTGCTTGCCTAGCAACCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGGGGGAAAAAAAAAAAAAAGAATCCTTTCTGCTCTTCCAGAGGACCTGAGTTCAGTTCCTACCACTCGGATCGCATGGCTCAAACCACCTATAGCCAGCGCCTTCTTCTGGACTCCAAAGACCCTCTCACACATACAGGCATTAAAAAAAAAACATAAATAAAAACAAGTGTTTTGTTTTAAAAAGGAGCTGTGGTTAAATGACGCACACTGTGATGTAAAACGCGCTCAGTCTGTCAGGTGGGCAGGCACCAAACACGGGCAGTATGGTATCTATACCACAATCCGTGTCCTGGCGCTCTGTATTGGAGACTGGGTGCCTTCAGGACTATAGTTGGCTCTAGTACTTGGATATTCGGTGTGATTGGTTCACAGACCAGTGACATCACAGCTAGGCCAGAGAGCCTGCTGTATCTGCTGAAACTTGACGTAAACAGTAGAAACCCTGCACTTAACAGAAGGCTGCTATTTCTGAAGTTGGTATGTTCACGATTCCAGAATTCCCACCTAGGAAAGAGACCATGTGTTGGCAAGCCTGTCACATGGCTGTATTGACTGGTAAAATGGGGTTTTCCAAACTGAGCTCTGGGCCTGCAGAATCACTTGGGGATTTGTGGCCAGTTCATACTCTCCCCCCCACCCCCCAATTCCTCCTGATACAAAGTAGCATGCCCATAATGTGTTTCTGTCTTCCTGTGTTCTTTCTTTCTCTCTGGGTGTCCCTTTTCTTTCAGAAGCAAGTGAAGGGGGAGAGCTTCTTCTCCATGTTTGCTTGGGTGTCCACTGGTCCACCCTGATGCCTGCCTGGCAGGCTGTATCTGCCACATAGGTGCTAGTAGTGGAAGGAACATGTGGCCCATATGACTGATCAGCAGTGCCTGTGTTCTGTTTTGTTTTAGTGACTCTATGCATTTTTTTGACTAGGTGATAAAAGCACATGGTTCAAAATTCCCAAAGTGCAGGAGGTTTTGGTGAAAAGTAAGTCTCCTTCCCCTCTGCTCTGAAACTGTAGCTCACCTCTTCAGAGGCTACCCCGATCTGTCAGTCATTCCTCATGTTTATTGAGTACCCACGCTGTGCTGGGCAGTGTTCTGGAAACCACACAGGGAGCAAGGCGGACACCTGCGGCCTTCCGGGAGCTTTGCTTATCACCGCCGTCCGCTGTGGACTTTGAGTTTCCAGGGGAGAAGTCAGAACAAGGGCCTCAGCGCCTAATCTCCAGCCTTTGAGATCCCATCTTTCTCAAATGCTCAGTGGCCTTGGATTACTTGCCTCCATTGTGGCGAAGTGGCCTCCTGGGTCCTGACACAGAGATAGTAGGTGGGGACGATTAAATGAGATACTATGGAAAGCGCCAAGCACGCACCCAGAACACAGTAAATGCTCAATAAATAGAAGCGTTGATTCTAGTGATCTGATCGTGCCTTCCTGTCCTGCAGCGACGGCTGATAATGGGGAAAAGGCTCCCCATTCAGCACTTTTCGTTGTCTCTCTGCTGTGATCAAAAAGCCACATTTTACAGCTCAGCTGAAGCTGTCTGAGGTTGAGTGCTGCGTGCGGTGTGTAAGGCAGTCAGCTCCTGGTTAGTCAGTGGGCTGCACAAATTACACCCCTCCTGATTGCTCATCTGTCTGCTTTGGATCTCCTCATCTGGAGGCTTTGGGGCTGTTGTTTACTTGAAGGGGCTTTGGGCTATTTCACCTTTTAATGTTACAGAAAGCAATCTCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGGGTGGACTCTGCATTTCCAAGACAGGAATTAAGGCCTTCTGGGTAAAATATCTAACTATAGTTCGGTTTAGCTATTTTAGGTTGTTCCTCCAGGACTTACGTCTGTCGGGTCTCTAGAAAAGCAACAAATGGGTGTTGTGGTAGTGAGGTGGAAAAAGTTACAAGAAAGTTACACATGGAGGCAAGGGGGAGGGGAAGATGGCAGAGAAGGAGAGGGGAGAGAGAAAGAAAAGGGGAGAGGGTAGAAGAGAGGGGAGGAGGGAAAGGAGAGAGGAGGGGAGGGGCCAAGCCAGGACCAGAAAATTTGTTCCCACATTAGGTCAAGAGCTGTTTCTTTCTGCAGCGCAGAAAGGGTTGCTGAGGGCATGGTGAAGTCAGGATGCAGGATGGGTTAACATGATCCAAGGAGATGTGCGTGCACCTGTTGGTTCCTCTGAACATCATTTAGCCCAGTTTCTTTTCCTTTCAGCCCTGCTGTCTGAGGCTGCCCTCTCTTGTTTTCCAGGCAGACAGAGTTTACAACTCTATGTGTAGTCAGTCCTCTCTGGCACAGGGGTGCTTCTCTCCATGGTGAGAACGGGGATGGCCGGGCATGGTGGTGAAATGCAGCCAGTGACACGGGTCACTTGAAGGATGATGGTTGTTCCAAGGTTTGGGTTGTATTGACAACATTCCCTGCGTCCTGGTGGAATACTGACAGAGATGGATTAGTAGTAAGATCAGTGGTGCCCAGATACCAATGCGTAGAAAGGCAGCAAGGCAGCAGTGCATGATGGGAGCTCACCTGATGCAATCGGCCACCCCCCTTGCTTGAGGTCATTGTCTGTACTGGTCCTGTGCTCACAGCTGAGGTGCAGAGCTGAGGAGGCCAGGGGCACTCTGGTCAAGCACCGTGCGGTGTGACCTCTGGACCTTGTTTCTCCTTCCCATCTTAGTCACCTGTTAGGAAATAGCAGCCTCCGCCCTCACTCAGCCTCTTGATGCCTGCATTCCATCCTTCTGTGGGCCAGCTGAGCTCGGGGATTGCCCTCCCTGCGCATGGGCTCACGAGGCAGCACCAGAAAGCGGCTGAGGCAGGAGTCACGTGACCAGGTGTGCACGTGAGTGTCATTCAAAGATGGCTTCTTCAGGTAGGACGTCTAGAAGTGCAGAGAGCTAGCCAGCACTGCCTCCTTCCCTTCCCCTCCCCTCTCCCTCTCTCCCTCCCCTTCCTCGACTTTTCTCTTTCCCCTCTTCTCTCACCTCCTTCTCTGTGTGTGTCTCTCCCCTCTCTTTCTCGCTTCCTTTCTCTGATCCCTCTCTCTCCCTCCCACCACCCTCTGCCTCCCTGTATATAAACCTCAAACTTCGTTATTACTGTTAAGACTGTGATGGTTGAACGTTAATCACGTTTCTTACATCAGCCTGACCAGGGACAGACAAACATTTCCAAGAGGTTCACTGAGAACCTGCGAGCGGGGTTTCTTCCTCTCAAACCTAGAGACCCTGCAAAGTCACCTTCCCAGGATTTTACGGTTCAAAGCTCTAGGCAAGCAGATTCAATAAGGGCCCAAGCCATCATAGGCCTAGACAGGCAGAGGACAGCAGAGTTCAGTGAAGCCCGGGTGGGGAAGGTAACTGGAGAGACAAACAGCCTCCCTGCCAGAACATAGTCAAACCTATTTATAACATGACTGACGATCCAGCCATTAATCCTAGCGCTCTCACTAAGGCTTTCACGCTGCCAGTCAAGTGTGGAGCCAGGCTCTTCTTGGGAAGTGAAAATTTAGGGCCCTTGCTGCTTTATACATATTTACCACAGCGCTCTCAGAAATACATAGGGATTTTCAATAACATAAATATGAATAATACTATATAAATATTAAACCACACAGTTTAATATTAAACCATTACCTTTGCTGGCTTGTAAATATTTGAACGCAGGAAGCAGCTGATGCTGGCCAATTTTGTTTTATTATAAAGAGGATTAGACCAGTCATGAAATTGAATACAGTCCGTCTCACTCGGAGCTTGGTGTGACCTGGTGCTGTGCTAGGTGATAATTATGGAATGTTTGACATGGGAAGGTGGGTTGTTTTATTGTTACCATTTAATCACTTATTTGTAGCATAGACATTCGATATCTGTGCTGTGTCTGTTGATTCTGCCTTTATGGTAACTGTAGACCTTCATGGCACAAAACCTGTTGTAGGCCAGAAGTCCCAGCAGGGTGCCATCGTCACTTTGCTCATGGTTTTAGTTCATTTTCCAGGAAGTTGTAGGGAAGCCCTAGTTCGAATCACCTTTCGTAAAGGTCCAAACCGTGACTCAGAGGTGTCAAATGACACTTCAAAGGGTCTCTGTTCATAACTGCTAGAGCTTGACTCTGAACCCCTACCAGACAGAGTGAATTAAAATGATAGTTTTACAAGTCCCACATTTCGAAGGAGATGTTTGCACTGTGCTCAGATGTGAGGACCTGTTTATTGTCCTGCGGATCAGGTCATCGTATCTTAATTCATCTGTAACAAGTGTGCACAGCTCCCATGCTTCTCATGGTTTTGTGGAGTCCGTTCTGAAATCTGAGGACAAGAAAATAGAAACATGGACTTACCATGTTTGTCCTCCGTCAAGCTTAATCCCAGAACACTAAGTCATGCTAGCATGCAGATTTGGAAATAACAACACAACTACCCTCTTCATTCGTTATTAATCACCAATTCCAAAACTATAGGGCACTTCGAATGTACAGTCCAGCTGAGAGACCTCCCCAGGCCACGTGAGAGCCTAGACACCCCGGGTGGGGACACCCCTCTCAGACTGTGAGCAGAAAGTAAGAGAGGAAGAAATTAGTCACGTGAGAAAGAACATTCACCCTGCCCAGGCTCAAAGTCTGAGTTTAAGAATCTGCAGACTGAAGGAACTAACTCCCTGACAAGTGGACGGTCTGGGATGCTGGGGAGTGGGGGAGGGGCACTCCACATCCCAGGCTCGTGGGAAGCAAGCCTTGTGTAAAATGCCTTACAAAACACATTGGCTTGTGGTTTTTAGATATGGAAAAAAAAGGAAAAAAAAAAAAAAAAGCCTAGCATTCTCTTCCCGAAGTCTGGCTTCCCTCCCACTCCTGTAGTTTTCGTGTGGCTTGCGGCCGGACTGAGCGGATTAAAACATTGAGGAGTCATGTCCATTTACTCAATTCACGAGATCCCCACTTGCCCCGTACAGATTTCAATCTCTCTCTACTTAGGCAACAGGCCAAGAGGGTGGACGGAGGCATGGGGAAGGGCTCGTCGAGGCCCCACCCCTAACTGGGGAACTATTGGCTGTAGATAGCAGCTGGTCAGGGAGAGTCACTCTTCTCTGGGGGTGTGGCCGGGGGTGTGGCCACAGGTAAATTACTTCTGCCCCATTGGATAGCTGCACAACCTGGTAGTTGTGGGCTGCACTGATGAGACACTGGGTTTTTAAAAAACCAAGCTGTGAGAGGACAAGGAGGGGTTGCAATAGGGACTTGGCGGGCGAGGGGGCGGCGGATATGATCATATTGCCTTGTGCATATGAAATTCTCAAAAAGTAAATTTAAAGAACTTAAAAAAAAAAAAGACATGCTGGGCACAACGACTTAGGTTTCAAAACACCTTGCTGACATCCTAGACTAACTACCCAGCTAGTCTGGCGTGTACATCAGAGGGTGCCATTGAAATGGCCTCTCAGATGGACCCAGGAGGAACCTGCAGAGAGCTGGCTATCTCCTTACTGCTCACAGAAACAGGACACTTTGCCATAGGAGAGAGGCCCCATGCTTCAGAGGAGAGACATTTTAATAGGAAAGTGGCAGGGTCACCTCCTGGGCCCTGTCTTCTCCTCCTGGTCACTGTCAGCCCACTCTTCGTACCATCTCAAGAGTGAGAAGCAGTAAACACAGACTGACTAGGAGTGTTCAAGAATGGAGAGAACTCTTGCCCCAAACTCCAGCAGAATACTTCCCCAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCACTCCAGCATAGCAGAATACTTCCCCAGTTTTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCCCCCCCCCGATCTGTGTGTTTGATCTGAGGCGTCCCTAGGAACTCTAGTGTCACAGCTGCTTCCCTAGGCCCGCAGTTTCCCAACCTCCACCCAAGGGCAGGCCCTCCCTTCTTTCCTGCCCGCCTTCCACCTGACAGGGACCATAAATAACAGAGGCTCCCGGTGTTCCCAGCCGAGAACAAAGTTGAAAGTTTGCCTGCAGCTCCCGGCCACTCCTGCTCTCAGCCCTTCTTTGTTTTCTCCCTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTACCTGGCTTGGCTGTTTCTTCATTCACTTTAGAGAAGAGCCCGTCTCCAAGTCTCCTAGTTGCACAAGTGCCCGAGGCTCTCTGGACTTGTGAGGGTCCCAGCTACTCGGGCTGCACTGGTATCAAGTTACTGAAAGTCTACACCCAGGCAGTCCTCATATTTACATACAAATAACTCCTGGGTTTGCATTTATGTCACTATTGGGTCCTGTGAGAGGCTTGCCAGTGCGTCCTTAATCCAATCAGAAGGCGCTTTGAAAGGATGTCTGCGAAGCGGTCAGAAGGATGTTCCTCGCTATTAAGTGTTGCCACACAAAATTTTTTGAATGTTTTGGTCTGAGATTCTTTTTTTTTTTTAATCTTCGGAGTTTAAAAGTGAGGAATGATGTGCATTTGCTCAGTTGCTTGTGACGACTTGGAGATGCTGAGGGAAACGGTGCAGCCCTGGTGAAGAAGATCTGAGTAGGGAAGGGTTTGGATCTGCACCAGACTGGTGTGGATTGGGGCTGGTGTGGACGGCTTCCTCTAAACCCCTGCTTAAGGAATTCCTGGAAGTCTCCGGAAAGCATTCCTCAACCCAGCGTGGTGGAAATGGCTTTGCCACACAGTAAGATCTTGCTTTAATTCCTGCTTGGTGGGTACTGGTTTGGAGAAATATGCAAATACCCCTCCCTTTCGAATACCTAAAGTCCTGCAGTACGGTGTAGAGTAGCCTAGCCGCGGGAAAACGGTCTGTTTAGCTTTTAACATTTGAGAAAAGAAAGTAGTTGCCCGTGTGCTTCAAGACCTGATTGGCTGCTAAAAAGTTGAGCTCCCGTGGTTTCAAGCGAGTTGAAATGAATGAGAATTGTAAACTGTAGTGAATGGAGTATTGAGCTGTGAATCACTTGCCTCTGGGAGAGCCTAGCATATACACATTTAAGAATCTCTTTGGGCCAGCCAGCTTGTATGTAGAAAGGGAAGAAAAGTAATTTTAAGAGAGACCGGGTTTGGGCCAGCCAGCTTGTATGTAGAAAGGGAAGAAAAGTAATTTTAAGAGAGATCGGGTTTACCCATGTGGAGGGAACTTGCTATACTTTGGGAGGGGTGGGAACCATCCCAGAGGGCAAAAGACAATTGAGAAACCTGCCCCGTTGCTCTTGGAATGTGGTTTTCCCTGTGAGCTCACAAGGCACACAGAACTCGGGCGAGCATTCTGCATGCATTAACTCTTTGTGTGGATCTCGCACTGCCACTGGTTCCCCTTTCTGGCTACAGAAGCCCCTAGCTCAAGGCGTCTGTAAAAGGCAGAGTTAGTTGCTTTGCAAGTTCATCTGAGAAGTTTAAAAACAGTTCAAAATTAATGTGCTCCGAGGTCTCCCAGGCAGGTGGGTACGACTTCCACCATTAACTCACAAAACTCAGAAGAGATGTGCCCCAGCCTGAAATCCTAAGAGTAAAACGGTTTAAAGAACAGACACCAGTTTCATTCCCAGGCAGGTGATTTAGCTCAGTTGGTTTAAAAGCCCTTGCTAAGCCTGACTAAGTTTGATCCCGGAACCCACATCGTGGAGGCAGAGAACTGACTCACACGGTTGCCCTCTGACCTCACAGGTGCACTTTGCATGTTCACACGAACGAGCACAAGTTGTCAACTAAATAAAACTGTTCCCTTTCCTCGCTCTAAGGACAGAATTAGTGACATGGGCCTTACTGTGTCCTTTCAAACAAGATGTCGTCACCAGGGGTGGTAAAGAGGAAAACTCACCTGAGAGATTAGCTCCAGTCTATCTAACTGAACCTGGCGGGCAGGAACGGGTCAGGGGTCATGCTTACATTGATCATTAACACTAACTGAGCTTGCTACTTTGGTCAGCCCCTGCAATGGGGAACTAACCTCTCCCTTCACTGTTTCTTTCTGGATGGCAGTTAAATAAAAATCTACAGGGGCACCGGGAAAGGAGATAAGACCGTGAGCGTCAGTTTTCTCCCTGATTGCCACATAGTCGAGAGGGAGGGCTCCTGACTGGCTTGTTCTCCACCTGCAG
Seq C2 exon
GTGAAGATGCCATCACAGGGGACACTGACAAGTATCTCGGGCCACAGGACCTCAAGGAGCTGGGCGATGACTCCCTGCCTGCCGAGGGCTATGTGGGCTTCAGTCTCGGAGCCCGTTCTGCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000053288:ENSRNOT00000077620:23
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.470
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]